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33
datasets available to search
ShareScore release 0.9.0
Dataset results
33 results for “DNA topology”
Chromosome topology shapes neuronal non-CG DNA methylation to influence MeCP2-mediated enhancer repression (RNA-Seq)
GEO Series GSE123372. Mus musculus. 42 samples. Type: Expression profiling by high throughput sequencing.
An increase in negative supercoiling in bacteria reveals topology-reacting gene clusters and a homeostatic response mediated by the DNA topoisomerase I gene
GEO Series GSE77749. Streptococcus pneumoniae R6. 14 samples. Type: Expression profiling by array; Expression profiling by high throughput sequencing.
Mutational synergy coordinately remodels chromatin accessibility, enhancer landscape and 3-Dimensional DNA topology to alter gene expression during leukemia induction (ChIP-seq)
GEO Series GSE146663. Mus musculus. 35 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The fork protection complex generates DNA topological stress-induced DNA damage while ensuring full and faithful genome duplication [ChIP-seq]
GEO Series GSE239965. Saccharomyces cerevisiae. 88 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
DNA topological regulation by topoisomerase IIβ-DNA-PK interaction is important for controlled hypoxia-inducible gene expression [TMP-seq]
GEO Series GSE285699. Homo sapiens. 12 samples. Type: Other.
Cohesin causes replicative DNA damage by trapping DNA topological stress
GEO Series GSE131558. Schizosaccharomyces pombe; Saccharomyces cerevisiae. 114 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
An increase in negative supercoiling in bacteria reveals topology-reacting gene clusters and a homeostatic response mediated by the DNA topoisomerase I gene [RNA-Seq]
GEO Series GSE77748. Streptococcus pneumoniae R6. 6 samples. Type: Expression profiling by high throughput sequencing.
Separable functions of Tof1/Timeless in intra-S-checkpoint signalling, replisome stability and DNA topological stress
GEO Series GSE144321. Saccharomyces cerevisiae. 54 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Nucleosomal DNA has topological memory
GEO Series GSE228623. Saccharomyces cerevisiae. 6 samples. Type: Other.
The fork protection complex generates DNA topological stress-induced DNA damage while ensuring full and faithful genome duplication [TrAEL-seq]
GEO Series GSE239966. Saccharomyces cerevisiae. 4 samples. Type: Other.
The Fork Protection Complex generates DNA topological stress induced DNA damage while ensuring full and faithful genome duplication
GEO Series GSE239967. Saccharomyces cerevisiae. 92 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
The cohesin ring uses its hinge to organize DNA using non-topological as well as topological mechanisms
GEO Series GSE105005. Saccharomyces cerevisiae. 34 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
DNA polymerase ε harmonizes topological states and R-loops formation to maintain genome integrity in Arabidopsis
GEO Series GSE216170. Arabidopsis thaliana. 19 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.