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101
datasets available to search
ShareScore release 0.9.0
Dataset results
101 results for “Enrichment Analysis”
Data from: Phylogenomic analysis of target enrichment and transcriptome data uncovers rapid radiation and extensive hybridization in slipper orchid genus Cypripedium L.
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Supplemntary tables S1-S6 related with the article entitled: LC-MS-Based Plasma Proteome Analysis in Nursery Pigs Fed Diets Enriched with Native Chicory Inulin
<p><span>Table S1: Composition of the pig diet: control diet (C) and diets supplemented with 1% (T1) or 3% (T2) of native chicory inulin.; Table S2: Nutrient contents of the control diet (C) and the diets supplemented with 1% (T1) or 3% (T2) of native chicory inulin.; Table S3: Chemical composition (%) of inulin (IN) used as a feed supplement.; Table S4: Porcine plasma proteins submitted for further analysis.; Table S5: Proteins significantly altered in response to the T1 diet.; Table S6: Proteins significantly altered in response to the T2 diet.</span></p>
Example Datasets for Functional Enrichment Analysis
<p>This dataset contains a set of example data for a functional enrichment tutorial.</p>
Supplementary Material for "Integrating Security-Enriched Data Flow Diagrams Into Architecture-Based Confidentiality Analysis"
<p>Supplementary material for the paper "Integrating Security-Enriched Data Flow Diagrams Into Architecture-Based Confidentiality Analysis". For more information, please see the README.md. For even more information please visit https://dataflowanalysis.org</p>
Analysis of RNA-seq, DNA target enrichment, and Sanger nucleotide sequence data resolves deep splits in the phylogeny of cuckoo wasps (Hymenoptera: Chrysididae)
<p>The wasp family Chrysididae (cuckoo wasps, gold wasps) comprises exclusively parasitoid and kleptoparasitic species, many of which feature a stunning iridescent coloration and phenotypic adaptations to their parasitic life style. Previous attempts to infer phylogenetic relationships among the family's major lineages (subfamilies, tribes, genera) based on Sanger sequence data were insufficient to statistically resolve the monophyly and the phylogenetic position of the subfamily Amiseginae and the phylogenetic relationships among the tribes Allocoeliini, Chrysidini, Elampini, and Parnopini (Chrysidinae). Here, we present a phylogeny inferred from nucleotide sequence data of 492 nuclear single-copy genes (230,915 aligned amino acid sites) from 94 species of Chrysidoidea (representing Bethylidae, Chrysididae, Dryinidae, Plumariidae) and 45 outgroup species by combining RNA-seq and DNA target enrichment data. We find support for Amiseginae being more closely related to Cleptinae than to Chrysidinae. Furthermore, we find strong support for Allocoeliini being the sister lineage of all remaining Chrysidinae, while Elampini represent the sister lineage of Chrysidini and Parnopini. Our study corroborates results from a recent phylogenomic investigation which revealed Chrysidoidea as likely paraphyletic</p>
Enrichment of Human Milk With Human and Bovine Milk-based Fortifiers for Very Preterm Infants: a Meta-analysis
ClinicalTrials.gov study NCT06870318. IPD Sharing: YES. Countries: 2. Publications: 2.
Data from: A cost-efficient and simple protocol to enrich prey DNA from extractions of predatory arthropods for large-scale gut content analysis by Illumina sequencing
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Analysis of RNA-seq, DNA target enrichment, and Sanger nucleotide sequence data resolves deep splits in the phylogeny of cuckoo wasps (Hymenoptera: Chrysididae)
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Analysis of paralogs in target enrichment data pinpoints multiple ancient polyploidy events in Alchemilla s.l. (Rosaceae)
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Guo et al., Table S20 - Global analysis of the heparin-enriched plasma proteome captures matrisome-associated proteins in Alzheimer's disease
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Table S2: Gene set enrichment analysis and KEGG
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PPARγ-bla dataset curated and enriched using the Enalos tools and Enalos KNIME nodes for machine learning analysis (SCENARIOS project)
<p>A curated and enriched dataset for PPARγ-bla, intended for in silico model development, was obtained from PubChem BioAssay under the numeric identifier AID 743194 using Enalos tools and Enalos KNIME nodes. This dataset specifically utilizes compounds from the Tox21 10K chemical library that underwent screening against the PPARγ-bla HEK293H cell line. The cell line contains a beta-lactamase reporter gene, and all the information was extracted from PubChem Bioassay ID 743194 using Enalos tools and Enalos KNIME nodes. The original bioassay, consisting of 6587 compounds, assessed the antagonist activity of small molecules and classified them as 'active', 'inactive' or 'inconsistent' based on their AC50 (potency) score. The curated PPARγ dataset comprises 1230 compounds selected from the original bioassay and enriched with 777 molecular descriptors extracted from their 2D structure using EnalosMold2 KNIME nodes.</p>
Gene Ontology Enrichment Analysis of High and Moderate Impact SNPs and InDels in CHMX_Ch1 and QO Genomes
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GO Enrichment Analysis on Single-Cell RNA-Seq Data
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Data from: Mitochondrial capture enriches mito-DNA 100 folds enabling PCR-free mitogenomics biodiversity analysis
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Data from: Evaluating the performance of anchored hybrid enrichment at the tips of the tree of life: a phylogenetic analysis of Australian Eugongylus group scincid lizards
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Transcriptome analysis of post-hatch breast muscle in legacy and modern broiler chickens reveals enrichment of several regulators of myogenic growth
GEO Series GSE65217. Gallus gallus. 23 samples. Type: Expression profiling by high throughput sequencing.
SSHscreen analysis of cowpea drought stress SSH libraries (F&R) to calculate Enrichment ratio 2 and 3 values
GEO Series GSE20273. Vigna unguiculata. 12 samples. Type: Expression profiling by array.
Improving gene set enrichment analysis (GSEA) by using regulation directionality
GEO Series GSE208571. Bacillus subtilis. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome analysis of Streptococcus mutans quorum sensing-mediated persisters reveals an enrichment in genes related to stress-defense mechanisms
GEO Series GSE244067. Streptococcus mutans UA159. 6 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.