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Fig. 4 in Establishment of the sea grape flatid, Petrusa epilepsis (Hemiptera: Fulgoroidea: Flatidae), in Florida
Fig. 4. Egg masses of Petrusa epilepsis on Stachytarpheta jamaicensis (blue porterweed) (A) and Hamelia patens (firebush) (B, C).
Fig. 1 in Establishment of the sea grape flatid, Petrusa epilepsis (Hemiptera: Fulgoroidea: Flatidae), in Florida
Fig. 1. Petrusa epilepsis collected at the University of Florida, Fort Lauderdale Research and Education Center in Davie, Florida; dark morph (lef), light morph (right).
Fig. 2 in Nocturnal vs. diurnal pollination of self-fertile peaches and muscadine grapes
Fig. 2. Moth visitors to Redhaven peaches: (A) Mythimna unipunctata; (B) Peridroma saucia – note the blurred wings as an indication of vibration; (C) P. saucia (3×); (D) P. saucia (4×).
FIGURE 3 in Investigations into the ancestry of the Grape-eye Seabass (Hemilutjanus macrophthalmos) reveal novel limits and relationships for the Acropomatiformes (Teleostei: Percomorpha)
FIGURE 3 | Optimal cladogram resulting from the partitioned-likelihood analysis of the Sanger and UCE dataset of the 54 core taxa and 279.979 nucleotide characters. Clades with ≥95% bootstrap support are identified with a black circle, clades with 70–94% bootstrap support are identified with a gray circle, and clades with ≥50–69% bootstrap support are identified with a white circle.
FIGURE 2 in Investigations into the ancestry of the Grape-eye Seabass (Hemilutjanus macrophthalmos) reveal novel limits and relationships for the Acropomatiformes (Teleostei: Percomorpha)
FIGURE 2 | Hypotheses of relationships among the Acropomatiformes based on the following studies: Smith, Wheeler (2006); Smith, Craig (2007); Betancur-R et al. (2013b); Near et al. (2013, 2015); Thacker et al. (2015); Davis et al. (2016); Mirande (2016); Sanciangco et al. (2016); Ghedotti et al. (2018); Rabosky et al. (2018); Satoh (2018). The asterisk in Mirande refers to the polyphyly of Malakichthyidae, where some members of the family were resolved outside of the Acropomatiformes.
FIGURE 5 in Investigations into the ancestry of the Grape-eye Seabass (Hemilutjanus macrophthalmos) reveal novel limits and relationships for the Acropomatiformes (Teleostei: Percomorpha)
FIGURE 5 | Optimal cladogram resulting from the partitioned-likelihood analysis of the Sanger and UCE dataset of the family-level 57 taxa and 279.979 nucleotide characters. Clades with ≥95% bootstrap support are identified with a black circle, clades with 70–94% bootstrap support are identified with a gray circle, and clades with ≥50–69% bootstrap support are identified with a white circle.
FIGURE 6 in Investigations into the ancestry of the Grape-eye Seabass (Hemilutjanus macrophthalmos) reveal novel limits and relationships for the Acropomatiformes (Teleostei: Percomorpha)
FIGURE 6 | Simplified 57-taxon maximum-likelihood phylogeny of major acropomatiform clades with the maximum-likelihood optimization of depth illustrated as pie charts on the nodes (black: fishes that live in the deep sea; white: fishes that exclusively live in shallow water) and of bioluminescence on the branches (blue: clade includes bioluminescent fishes; black: clade does not include bioluminescent fishes). The depth ranges of the different acropomatiform clades (standard deviation from the mean) are plotted in gray and the depth mean values are represented by the colored silhouettes (blue: families with bioluminescent fishes; pink non-bioluminescent families).
FIGURE 1 in Investigations into the ancestry of the Grape-eye Seabass (Hemilutjanus macrophthalmos) reveal novel limits and relationships for the Acropomatiformes (Teleostei: Percomorpha)
FIGURE 1 | Images of preserved and radiographed specimens of Hemilutjanus macrophthalmos: USNM 77623 (upper); SIO 12- 3086 (middle); LACM 44038 (lower). Scale bars = 10 mm.
FIGURE 4 in Investigations into the ancestry of the Grape-eye Seabass (Hemilutjanus macrophthalmos) reveal novel limits and relationships for the Acropomatiformes (Teleostei: Percomorpha)
FIGURE 4 | Optimal cladogram resulting from the species-tree analysis of the Sanger and UCE dataset composed of the 54 core taxa and 466 loci. Clades with ≥95% LPP support are identified with a black circle, clades with 70–94% LPP support are identified with a gray circle, and clades with ≥50–69% LPP support are identified with a white circle.
Drosophila suzukii population dynamics and control efficiency of mineral dusts with a focus on grape protection
<p>The invasive pest<em> Drosophila suzukii</em> is threatening berry production. It is mainly managed via chemical control, which is associated with consumer and environmental concerns. Here, we tested the efficiency of mineral dusts under field and laboratory conditions. Furthermore, population dynamics were studied in a vineyard and its surroundings. The kaolin products Cutisan and Surround®, as well as the CaCO<sub>3</sub> product Carboliq had neither insecticidal nor repellent effects on <em>Drosophila suzukii</em> adults in laboratory choice tests with grapes at concentrations of up to 2% (w/v). Cutisan and Surround® significantly reduced the number of deposited eggs (-41.9% and -49.3%, respectively) while Carboliq had no effect on the oviposition under laboratory conditions. The Surround® treatment significantly reduced the number of flies trapped on 09/09/2020 at a test vineyard. Depending on the assessment date and treatment, between 59 and 84% of the flies in the bait traps were females. The number of eggs found in fruit treated with Carboliq in the field was higher at each assessment date than in the control but this difference was not statistically significant. Cutisan and Surround® applications in the field showed an equivalent or lower average number of eggs compared to the control but this difference was only significant on 24/09/2020. The highest number of <em>D. suzukii</em> adults was observed around September in the field and a decline of the population occurred in the winter months until July. In epidemic years, temperature - humidity - combinations prior to population peaks were quite stable with low humidity being associated with a high temperature and <em>vice-versa</em>. In non-epidemic years, humidity fluctuated more than in epidemic years and temperatures were lower before population peaks. The effect of global radiation on population maxima seemed to be minor.</p>
Figure 3 in A phylogenetic analysis of the grape genus (Vitis L.) reveals broad reticulation and concurrent diversification during neogene and quaternary climate change
Figure 3 Chronogram of Bayesian divergence time estimates of Vitis diversification based on 27 concatenated nuclear gene fragments inferred using the BEAST software. Grey bars represent the 95% Highest Posterior Density (HPD) intervals of nodal age in million years. Calibration points are indicated with filled circles. Significant evolutionary events are indicated with black diamonds. Asterisk indicates inclusion of a clonally propagated cultivar that may affect the local divergence estimate. Additional files 4 and 5 show nodal ages and posterior probabilities for all nodes in this tree.
Figure 1 in A phylogenetic analysis of the grape genus (Vitis L.) reveals broad reticulation and concurrent diversification during neogene and quaternary climate change
Figure 1 Native geographic distribution of the genus Vitis (grey shading1) and geographic regions of origin of Vitis species used in this study. Dashed lines indicate southern borders of the polar ice cap during the most recent ice age2. Dash-dot lines indicate ice age refugia of the forest flora2. Areas labeled 1 through 4 were used in ancestral area optimization (reversible parsimony, Additional file 14). Redrawn from 1Alleweldt et al. [7], 2Reinig [14].
Figure 6 in A phylogenetic analysis of the grape genus (Vitis L.) reveals broad reticulation and concurrent diversification during neogene and quaternary climate change
Figure 6 Simplified version (cartoon) of the MP strict consensus tree. Blue = North and Central American accessions, Green = Asian accessions, Red = European accessions. For comparison, Additional files 6 and 10 represent cartoons of the ML and BA trees, respectively.
Figure 5 in A phylogenetic analysis of the grape genus (Vitis L.) reveals broad reticulation and concurrent diversification during neogene and quaternary climate change
Figure 5 Hypothesis of phylogenetic relationships among Vitis species. Eurasia. Continuation of Figure 4.
Figure 2 in A phylogenetic analysis of the grape genus (Vitis L.) reveals broad reticulation and concurrent diversification during neogene and quaternary climate change
Figure 2 The NeighborNet of 273 accessions based on 27 concatenated nuclear gene fragments. Numbers indicate the series to which species have been recognized 1: Aestivales (Planchon); 2: Cinerascentes (Planchon); 3: Cordifoliae (Munson); 4: Labruscae (Planchon); 5: Ripariae (Munson); 6: Occidentales (Munson); 7: Viniferae (Planchon); 8: Flexuosae (Galet); 9: Spinosae (Galet). See also Additional file 15.
Evolutionary signatures of a trade-off in direct and indirect defenses across the wild grape genus Vitis
<p>Evolutionary correlations between chemical defense and protection by mutualist bodyguards have been long predicted, but tests of these patterns remain rare. We use a phylogenetic framework to test for evolutionary correlations indicative of trade-offs or synergisms between direct defense in the form of plant secondary metabolism, and indirect defense in the form of leaf domatia, across 33 species in the wild grape genus, <em>Vitis</em>. We also performed a bioassay with a generalist herbivore to associate our chemical phenotypes with herbivore palatability. Finally, we tested whether defensive traits correlate with the average abiotic characteristics of each species' contemporary range and whether these correlations were consistent with plant defense theory. We found a negative evolutionary correlation between domatia size and the diversity of secondary metabolites in <em>Vitis</em> leaf tissue across the genus, and also that leaves with a higher diversity and richness of secondary metabolites were less palatable to a generalist herbivore, consistent with a trade-off in chemical and mutualistic defense investment. Predictions from plant defense theory were not supported by associations between investment in defense phenotypes and abiotic variables. Our work demonstrates an evolutionary pattern indicative of a trade-off between indirect and direct defense strategies across the <em>Vitis</em> genus.</p>
X-ray imaging of 30 year old wine grape wood reveals cumulative impacts of rootstocks on scion secondary growth and harvest index
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Evolutionary signatures of a trade-off in direct and indirect defenses across the wild grape genus Vitis
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Sculpture Grapes
[MM 19968](http://collections.smvk.se/carlotta-mhm/web/object/3008978) Bunch of grapes, moulded. Red clay with traces of white paint. Suspension hole at the stem. Grapes; Sculpture Clay; Pottery Source: Objaverse 1.0 / Sketchfab
Differentially expressed genes in berries and rachis of berry shrivel grape clusters used to prepare figures for a review
<p>Grapevine berry shrivel is a ripening disorder leading to significant economic losses in the worldwide wine and table grape industries. Sugar accumulation stops early after ripening onset accompanied with cell death in berreis and subtending pecicels and rachis finally resulting in berry shrinkage. To date, the triggers of BS remain unknown. The dataset supports figures prepared for an review which aims to summarize and critically discuss the current knowledge. Data are expressed as differentially expressed genes obtained from grape berries samples collected at six developmental stages (pre- until post-veraison) analysed with RNASeq and two pooled samples (pre- and BS symptomatic) from the rachis analyzed with a microarray study. Extracted information focus on primary metabolic processes including sugar transport and metabolism, organic acid metabolism, stress signaling and cell as well as cell wall organisation. Data are mean values of three biological represent and presented as log2 fold changes including statistical information. A meta-data sheet provides the most relevant information and references. </p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.