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74 results for “Helotiales”
FIGURE 2 in Rhexocercosporidium camporesii sp. nov. (Ploettnerulaceae, Helotiales) from Italy
FIGURE 2. Phylogram of RAxML analysis based on combined LSU and ITS sequence dataset. Bootstrap support values for maximum likelihood and maximum parsimony equal to or greater than 50%, and Bayesian posterior probabilities equal to or greater than 0.95 BYPP are indicated at the nodes as ML/MP/BYPP. The tree is rooted to Polydesmia pruinosa (CBS 111545 and TNS-F12764). Ex-type strains are in bold. The newly generated sequence is in red.
FIGURE 1 in Rhexocercosporidium camporesii sp. nov. (Ploettnerulaceae, Helotiales) from Italy
FIGURE 1. Rhexocercosporidium camporesii (MFLU 17-1594, holotype). a Apothecia on wood. b Close-up of apothecium. c Cross section of Apothecium. d Ectal excipulum e Filiform branched paraphyses. f Cylindrical ascus in congo red. g–j Cylindrical asci at different stages of maturity. k J+, ring in Melzer's reagent. l Ellipsoidal to fusiform ascospores. Scale bars a = 500 µm, b = 200 µm, c = 50 µm, d, e = 30 µm, f–j = 20 µm, k = 5 µm, l = 10 µm.
Supplementary material 1 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
: Data type: occurrence
Figure 7 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 7 Bayesian continuous-space phylogeographic analyses for Dasyscyphella longistipitata, and Fagus crenata grouped in three consecutive times. Red dots represent D. longistipitata localities, and blue areas are polygons for the nodes of dispersion for F. crenata.
Figure 6 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 6 Areas of conserved environmental suitability for Dasyscyphella longistipitata, where red is high (overlapping of four layers), yellow medium (at least three overlapping layers), and gray low (two overlapping layers) suitability.
Figure 4 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 4 Haplotype network based on the concatenated sequences of ITS and beta-tubulin of Dasyscyphella longistipitata. The size of the circles represents the haplotype frequency; white dots represent mutational steps between haplotypes (note that the branches lengths do not correspond to genetic distances). Colors represent the locality of origin arranged as a latitudinal gradient where red represents the further north site.
Figure 1 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 1 Geographical distribution of the sampling localities for Dasyscyphella longistipitata associated with cupules of Fagus crenata in Japan. Red dots and numbers correspond to D. longistipitata; whereas blue dots represent F. crenata study sites from Fujii et al. (2002). For sites nomenclature see Table 1.
Figure 3 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 3 Multivariate analyses of the genetic diversity inferred from ITS and beta-tubulin concatenated sequences of Dasyscyphella longistipitataA Principal Component Analysis (PCA) of genetic diversity at the individual level B principal Correspondence Analysis (PCoA) of genetic diversity using the localities as grouping factor. Colors represent the locality of origin arranged as a latitudinal gradient where red represents the further north site.
Supplementary material 5 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
: Data type: (measurement/occurrence/multimedia/etc.)
Figure 5 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 5 Bayesian Skyride Plot for ADasyscyphella longistipitata using the concatenated ITS and beta-tubulin, and BFagus crenata, using the reported sequences in Fujii et al. (2002). The y-axis represents the scaled effective population size (log10(Ne*u)), and the x-axis represents time as substitutions per site. Shaded area shows the 95% HPD of the posterior distribution. Solid lines show the median value of effective population size. Dotted shades show the upper and lower 95% highest posterior density. Note that the x-axis in A and B are non-equivalent to each other.
Supplementary material 3 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
: Data type: statistical data
Supplementary material 2 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
: Data type: statistical data
Figure 2 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
Figure 2 Paired PhiST values for Dasyscyphella longistipitata in the 14 studied localities. White asterisks indicate significance at p ≤ 0.05.
Supplementary material 4 from: Gasca-Pineda J, Velez P, Hosoya T (2020) Phylogeography of post-Pleistocene population expansion in Dasyscyphella longistipitata (Leotiomycetes, Helotiales), an endemic fungal symbiont of Fagus crenata in Japan. MycoKeys 65: 1-24. https://doi.org/10.3897/mycokeys.65.48409
: Data type: (measurement/occurrence/multimedia/etc.)
Supplementary material 1 from: Li C-J-Y, Thilini Chethana KW, Eungwanichayapant PD, Zhou D-Q, Zhao Q (2024) Additional four species of Tatraea (Leotiomycetes, Helotiales) in Yunnan Province, China. MycoKeys 102: 127-154. https://doi.org/10.3897/mycokeys.102.112565
Main differences between Tatraea
Figure 8 from: Li C-J-Y, Thilini Chethana KW, Eungwanichayapant PD, Zhou D-Q, Zhao Q (2024) Additional four species of Tatraea (Leotiomycetes, Helotiales) in Yunnan Province, China. MycoKeys 102: 127-154. https://doi.org/10.3897/mycokeys.102.112565
Figure 8 Tatraea yuxiensis (HKAS 128268, holotype) a fresh ascomata on the wood b–e dried ascomata on the wood f vertical section of an ascoma g–i excipulum j–k paraphyses l–o asci (o–p asci in Meltzer's reagent) p–v ascospores. Scale bars: 1.5 mm (b); 700 μm (d–c); 400 μm (e); 800 μm (f–g); 1000 μm (h); 200 μm (i); 100 μm (j); 70 μm (k–p); 15 μm (q–v).
Figure 5 from: Li C-J-Y, Thilini Chethana KW, Eungwanichayapant PD, Zhou D-Q, Zhao Q (2024) Additional four species of Tatraea (Leotiomycetes, Helotiales) in Yunnan Province, China. MycoKeys 102: 127-154. https://doi.org/10.3897/mycokeys.102.112565
Figure 5 Tatraea clepsydriformis (HKAS 128275, holotype) a–b fresh ascomata on the wood c–f dried ascomata on the wood g vertical section of an ascoma h–j excipulum k paraphyses l–p asci (o–p asci in Meltzer's reagent) q–r ascospores. Scale bars: 2 mm (c); 600 μm (d); 700 μm (e); 250 μm (f); 800 μm (g); 150 μm (h, j); 100 μm (i); 60 μm (k–p); 40 μm (q–r).
Figure 3 from: Li C-J-Y, Thilini Chethana KW, Eungwanichayapant PD, Zhou D-Q, Zhao Q (2024) Additional four species of Tatraea (Leotiomycetes, Helotiales) in Yunnan Province, China. MycoKeys 102: 127-154. https://doi.org/10.3897/mycokeys.102.112565
Figure 3 The results of the pairwise homoplasy index (PHI) test for the closely related species in Tatraea using LogDet transformation. A. PHI test for Tatraea yunnanensis vs. Tatraea macrospora. B. PHI test for Tatraea yuxiensis vs. Tatraea aseptata. C. PHI test for Tatraea clepsydriformis vs. Tatraea griseoturcoisina. PHI test results (Φw < 0.05) indicate significant recombination within the dataset.
Figure 2 from: Li C-J-Y, Thilini Chethana KW, Eungwanichayapant PD, Zhou D-Q, Zhao Q (2024) Additional four species of Tatraea (Leotiomycetes, Helotiales) in Yunnan Province, China. MycoKeys 102: 127-154. https://doi.org/10.3897/mycokeys.102.112565
Figure 2 Maximum likelihood tree based on a combined dataset of LSU and ITS sequences for the genus Tatraea. The ML bootstrap proportions (ML-BP) equal to or higher than 70% and Bayesian posterior proportions (BI-PP) equal to or higher than 0.90 are shown near the branches on the phylogenetic tree. Newly generated isolates of the current study are shown in blue and ex-types are shown in bold.
Figure 4 from: Li C-J-Y, Thilini Chethana KW, Eungwanichayapant PD, Zhou D-Q, Zhao Q (2024) Additional four species of Tatraea (Leotiomycetes, Helotiales) in Yunnan Province, China. MycoKeys 102: 127-154. https://doi.org/10.3897/mycokeys.102.112565
Figure 4 Tatraea aseptata (HKAS 128275) a–c Fresh ascomata on the wood d–g dried ascomata on the wood h vertical section of an ascoma i–j excipulum k paraphyses l–p asci (o–p asci in Meltzer's reagent) q–v ascospores. Scale bars: 1.5 mm (d); 400 μm (e); 800 μm (f–g); 1000 μm (h); 200 μm (i); 100 μm (j); 70 μm (k–p); 15 μm (q–v).
ScienceDex guides
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International Brain Laboratory public data
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OpenNeuro
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