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42 results for “Metabolic engineering”

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geo24/100

Metabolic engineering of the acid-tolerant yeast Pichia kudriavzevii for efficient L-malic acid production at low pH

GEO Series GSE202655. Pichia kudriavzevii. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2023View details →
geo20/100

Xylose induced dynamic effects on metabolism and gene expression in engineered Saccharomyces cerevisiae in anaerobic glucose-xylose cultures

GEO Series GSE69966. Saccharomyces cerevisiae. 30 samples. Type: Expression profiling by array.

openGEO-OpenMay 2016View details →
geo20/100

Engineering topology and kinetics of sucrose metabolism in Saccharomyces cerevisiae for improved ethanol yield

GEO Series GSE30535. Saccharomyces cerevisiae. 16 samples. Type: Expression profiling by array.

openGEO-OpenSep 2011View details →
geo20/100

PFK2/FBPase-2 is a potential target for metabolic engineering in the filamentous fungus Myceliophthora thermophila

GEO Series GSE214142. Thermothelomyces thermophilus ATCC 42464. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2022View details →
geo20/100

Reprogramming of primary metabolism facilitates metabolic engineering of bioactives in tomato fruit (ChIP-Seq)

GEO Series GSE62462. Solanum lycopersicum. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenOct 2015View details →
geo20/100

Transcriptional profiling of Myceliophthora thermophila on galactose and metabolic engineering for improved galactose utilization

GEO Series GSE165516. Thermothelomyces thermophilus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2021View details →
geo20/100

Whole genome sequencing of Saccharomyces cerevisiae: from genotype to phenotype for improved metabolic engineering applications

GEO Series GSE21479. Saccharomyces cerevisiae; Schizosaccharomyces pombe. 8 samples. Type: Expression profiling by array.

openGEO-OpenDec 2010View details →
geo20/100

Engineered MED12 mutations drive uterine fibroid-like transcriptional and metabolic programs by altering the 3D genome compartmentalization [Hi-C]

GEO Series GSE226015. Homo sapiens. 2 samples. Type: Other.

openGEO-OpenJun 2023View details →
geo20/100

Evolutionary engineering of a wine yeast strain revealed a key role of inositol and mannoprotein metabolism during low-temperature fermentation

GEO Series GSE67428. Saccharomyces cerevisiae; Schizosaccharomyces pombe. 6 samples. Type: Expression profiling by array.

openGEO-OpenMar 2015View details →
geo20/100

Saccharomyces cerevisiae engineered for xylose metabolism

GEO Series GSE835. Saccharomyces cerevisiae. 6 samples. Type: Expression profiling by array.

openGEO-OpenNov 2004View details →
geo20/100

Time-dependent Effects of BRAF-V600E on Cell Cycling, Metabolism, and Function in Engineered Myocardium

GEO Series GSE193466. Rattus norvegicus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2024View details →
geo20/100

Engineered MED12 mutations drive uterine fibroid-like transcriptional and metabolic programs by altering the 3D genome compartmentalization [CUT&Tag]

GEO Series GSE226013. Homo sapiens. 5 samples. Type: Other.

openGEO-OpenJun 2023View details →
geo20/100

Recovery of phenotypes obtained by adaptive evolution through inverse metabolic engineering

GEO Series GSE36118. Schizosaccharomyces pombe; Saccharomyces cerevisiae. 14 samples. Type: Expression profiling by array.

openGEO-OpenFeb 2012View details →
geo20/100

Metabolically engineered urea degrading and urea importing Sake yeast strains K7 (WT), K7 Dur1,2 and K7 Dur3

GEO Series GSE17867. Saccharomyces cerevisiae. 6 samples. Type: Expression profiling by array.

openGEO-OpenApr 2010View details →
geo16/100

Transcriptomic analysis of budding yeast with re-engineering acetyl coenzyme A metabolic pathways that prevent senescence

GEO Series GSE308402. Saccharomyces cerevisiae. 30 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2025View details →
geo16/100

Metabolic reprogramming of macrophages via engineered nanoparticles after volumetric muscle loss

GEO Series GSE288005. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2025View details →
geo16/100

Elucidation of gene clusters underlying withanolide biosynthesis in ashwagandha through yeast metabolic engineering

GEO Series GSE313882. Withania somnifera. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo16/100

Engineered methionine adenosyltransferase cascades for metabolic labeling of individual DNA methylomes in live cells

GEO Series GSE267304. Mus musculus. 6 samples. Type: Other.

openGEO-OpenMay 2025View details →
geo16/100

Identification of a novel metabolic engineering target for carotenoid production in Saccharomyces cerevisiae via ethanol-induced adaptive laboratory evolution

GEO Series GSE164470. Saccharomyces cerevisiae. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2021View details →
geo16/100

RNA seq of naïve CD8+ T cells expanded in different cytokines (along with our re-engineered cytokine) to find differences in t cell function, marturation and metabolic reprogramming.

GEO Series GSE202765. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2022View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record