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42 results for “MinION”
Minions
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New Diagnostic Tool (MinION) for Identifying Microorganisms in Foot Wounds of Patients Living With Diabetic Foot Osteomyelitis
ClinicalTrials.gov study NCT07391995. IPD Sharing: Not stated. Countries: 1. Publications: 16.
Data from: A first look at the Oxford Nanopore MinION sequencer
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A method for determining the origin of crude drugs derived from animals using MinION, a compact next-generation sequencer
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Fig. 5 Lateral habitus a in Rapid, large-scale species discovery in hyperdiverse taxa using 1D MinION sequencing
Fig. 5 Lateral habitus a and diagnostic features of Megaselia
MinION reads from CO236 and CO237
<p class="MsoNormal"><em>Xanthomonas translucens</em>, the causal agent responsible for bacterial leaf streak disease (BLS) in cereal crops, is re-emerging as a highly destructive pathogen on a global scale. Despite historical reports of BLS causing yield losses, there is growing anecdotal evidence suggesting that newer isolates of <em>X. translucens</em> may have increased virulence. Our research demonstrates that two<em> X. translucens</em> isolates, collected from different locations in Colorado, exhibit a greater level of aggressiveness on wheat and barley varieties when compared to older isolates. We propose that genetic variations between recent and older strains contribute significantly to the observed differences in isolate aggressiveness. To investigate this hypothesis, we conducted phenotypic and genetic analyses on two<em> X. translucens </em>isolates collected in Colorado in 2018, designated as CO236 (from barley) and CO237 (from wheat). With whole-genomes obtained by sequencing using Oxford Nanopore Technology (ONT), we have identified both similarities and distinctions between these recently collected isolates and previously characterized strains. The dataset provided herein contains the raw ONT MinION sequencing reads for isolates Xtt CO236 and Xtu CO237.</p>
Network analysis with either Illumina or MinION reveals that detecting vertebrate species requires metabarcoding of iDNA from a diverse fly community
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MinION reads from CO236 and CO237
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Evaluating the Lettuce Metatranscriptome with MinION Sequencing for Future Spaceflight Food Production Application.
GEO Series GSE152914. Lactuca sativa. 3 samples. Type: Expression profiling by high throughput sequencing.
A streamlined nanopore-compatible 5PSeq protocol for rapid phenotypic antimicrobial sensitivity testing (FigS4D-F_mixed_MinION)
GEO Series GSE312902. Staphylococcus aureus; Clostridioides difficile; Enterococcus faecalis; Bacillus subtilis. 4 samples. Type: Other.
Induction of a chromatin boundary in vivo upon insertion of a TAD border (MinION-nCATS)
GEO Series GSE166583. Mus musculus. 1 samples. Type: Other.
Data from: A MinION™‐based pipeline for fast and cost‐effective DNA barcoding
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MATRIN3 deficiency leads to cGAS-STING activation (MinION RNA-Seq)
GEO Series GSE216826. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
The microprotein Minion controls cell fusion and muscle formation
GEO Series GSE97764. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Fig. 5 Lateral habitus a in Rapid, large-scale species discovery in hyperdiverse taxa using 1D MinION sequencing
Fig. 5 Lateral habitus a and diagnostic features of Megaselia sepsioides spec. nov. b posterior view of the foreleg, c anterior view of the midleg, d, e anterior and postero-dorsal views of the hindleg, and f dorsal view of thorax and abdomen
Fig. 6 in Rapid, large-scale species discovery in hyperdiverse taxa using 1D MinION sequencing
Fig. 6 Haplotype variation of Megaselia sepsioides spec. nov. a UGC0005996, b UGC0012244, and c UGC0012899. UGC numbers
Fig. 6 in Rapid, large-scale species discovery in hyperdiverse taxa using 1D MinION sequencing
Fig. 6 Haplotype variation of Megaselia sepsioides spec. nov. a UGC0005996, b UGC0012244, and c UGC0012899. UGC numbers refer to specimen IDs
MinION-in-ARMS: Nanopore sequencing to expedite barcoding of specimen-rich macrofaunal samples from Autonomous Reef Monitoring Structures
<p>DNA basecalling, demultiplexing information and sequence barcodes</p>
Resequencing of select microbial isolates from the International Space Station with the Nanopore MinION
Microbial isolates from the NASA Space Biology-funded microbial tracking experiments were re-sequenced using the Oxford Nanopore MinION.
Direct cell-to-cell transmission of retrotransposons [Minion]
GEO Series GSE292040. Drosophila melanogaster. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.