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565 results for “RAS”
Linked collectors and determiners for: Genus Salix at the CSBG SB RAS Digital Herbarium.
Natural history specimen data linked to collectors and determiners held within, "Genus Salix at the CSBG SB RAS Digital Herbarium". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/42a55f11-4aeb-46cd-b7e0-b6cff2eef92b">https://bionomia.net/dataset/42a55f11-4aeb-46cd-b7e0-b6cff2eef92b</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/42a55f11-4aeb-46cd-b7e0-b6cff2eef92b">https://gbif.org/dataset/42a55f11-4aeb-46cd-b7e0-b6cff2eef92b</a>. Formatted as a Frictionless Data package.
Text-fig. 15. Large mammal remains from Gaverdovsky and Volchaya Balka, Late Miocene, North Caucasus. a – Hipparion cf. moldavicum, SSC-RAS G-1/1, upper right M1–2, occlusal view, Gaverdovsky; b – Hipparion aff. gromovae, SSC-RAS G-1/2, lower right m3, occlusal view, Gaverdovsky; c – Hipparion sp., SSC-RAS G-1/4, lower right m1, occlusal view, Volchaya Balka; d–e – Microstonyx aff. major, SSC-RAS G-1/3, upper left dP4, d – occlusal view, e – lingual view, Volchaya Balka. in Late Miocene (Early Turolian) Vertebrate Faunas And Associated Biotic Record Of The Northern Caucasus: Geology, Taxonomy, Palaeoenvironment, Biochronology
Text-fig. 15. Large mammal remains from Gaverdovsky and Volchaya Balka, Late Miocene, North Caucasus. a – Hipparion cf. moldavicum, SSC-RAS G-1/1, upper right M1–2, occlusal view, Gaverdovsky; b – Hipparion aff. gromovae, SSC-RAS G-1/2, lower right m3, occlusal view, Gaverdovsky; c – Hipparion sp., SSC-RAS G-1/4, lower right m1, occlusal view, Volchaya Balka; d–e – Microstonyx aff. major, SSC-RAS G-1/3, upper left dP4, d – occlusal view, e – lingual view, Volchaya Balka.
Text-fig. 6. Fish remains from Volchaya Balka locality (Late Miocene, North Caucasus). a – Scardinius sp., SSC-RAS G-2/1, pharyngeal tooth of the first row, side view, occlusal view; b – Abramis cf. bjoerkna, SSC-RAS G-2/2, pharyngeal tooth of the first row: top – side view, bottom – occlusal view; c – Carassius sp., SSC-RAS G-2/3, pharyngeal tooth of the first row: top – side view, bottom – occlusal view; d – Alburnus sp., SSC-RAS G-2/4, fragment of pharyngeal bone (os pharyngicus inferius), medial view; e – Acipenser sp., SSC-RAS G-2/5, left hyomandibular: left – medial view, right – proximal view; f – Gobiidae gen. indet., SSC-RAS G-2/6, tail vertebra: left – lateral view, right – dorsal view; g – Gobiidae gen. indet., SSC-RAS G-2/7, dentary: top – medial view, bottom – dorsal view. in Late Miocene (Early Turolian) Vertebrate Faunas And Associated Biotic Record Of The Northern Caucasus: Geology, Taxonomy, Palaeoenvironment, Biochronology
Text-fig. 6. Fish remains from Volchaya Balka locality (Late Miocene, North Caucasus). a – Scardinius sp., SSC-RAS G-2/1, pharyngeal tooth of the first row, side view, occlusal view; b – Abramis cf. bjoerkna, SSC-RAS G-2/2, pharyngeal tooth of the first row: top – side view, bottom – occlusal view; c – Carassius sp., SSC-RAS G-2/3, pharyngeal tooth of the first row: top – side view, bottom – occlusal view; d – Alburnus sp., SSC-RAS G-2/4, fragment of pharyngeal bone (os pharyngicus inferius), medial view; e – Acipenser sp., SSC-RAS G-2/5, left hyomandibular: left – medial view, right – proximal view; f – Gobiidae gen. indet., SSC-RAS G-2/6, tail vertebra: left – lateral view, right – dorsal view; g – Gobiidae gen. indet., SSC-RAS G-2/7, dentary: top – medial view, bottom – dorsal view.
Dataset for the Ras-related protein Rab5A antibody screening study
<p>This project contains the underlying data included in a study which characterized eleven commercially-available antibodies for Ras-related protein Rab5A. The study is also available on Zenodo (https://doi.org/10.5281/zenodo.8356241).</p>
Panitumumab and RAS, Diagnostically-useful Gene Mutation for mCRC
ClinicalTrials.gov study NCT02394795. IPD Sharing: YES. Countries: 1. Publications: 3.
Hydraulic (HEC-RAS) model of the Lower San Saba River between Harkeyville and San Saba, TX, USA
Open the record for dataset details and reuse information.
Ras Il-Huta
Ras Il-Huta scuplture in Marsaskala (Malta). Created in cooperation with [Mariusz Milka](https://sketchfab.com/mariusz.milka) during my basic photogrammetry course Source: Objaverse 1.0 / Sketchfab
Evaluation_of_different_feeding_frequencies_in_RAS-based_juvenile_pikeperch-DATA
<p>Data file for a study examining various feeding strategies for juvenile pikeperch (<em>Sander lucioperca</em>) in a Recirculating Aquaculture System (RAS) over a period of 112 days. It compared five different feeding intervals (2 hours, 4 hours, 6 hours, 8 hours, and 12 hours) using an automatic feeder Imetronic® (Pessac, France). The results showed that shorter feeding intervals led to higher growth heterogeneity and slightly increased fin damage. However, all tested feeding frequencies provided sufficient nutrients for proper pikeperch growth and welfare. The 8-hour feeding interval was identified as optimal, supporting better conditions for fish (Fulton's coefficient), specific growth rate, survival rate, lower fin damage compared to other tested frequencies, and optimal levels of biochemical parameters in blood plasma.</p> <p> </p> <p>ACCESS<br>it is a condition of the CENAKVA RI financing provider to record accesses to open data. Data can be requested at the following email: <strong>dubova@frov.jcu.cz</strong></p> <p>or visit the CENAKVA RI website<br>https://www.frov.jcu.cz/en/faculty/faculty-parts/south-bohemian-research-centre-for-aquaculture-and-biodiversity-of-hydrocenoses-cenakva/large-research-infrastructure-cenakva</p>
How can we biochemically validate protein function predictions with the Ras GTPase family? - Associated data
<p>This is the data that accompanies the pub "<a href="https://doi.org/10.57844/arcadia-74ad-345f">How can we biochemically validate ProteinCartography with the Ras GTPase family?</a>" It's part of a group of pubs focused on validating ProtienCartography that begins with "<a href="https://doi.org/10.57844/arcadia-cae9-96c4">A strategy to validate protein functions <em>in vitro</em></a><a href="https://doi.org/10.57844/arcadia-cae9-96c4">." </a></p> <p>For this repository, we ran ProteinCartography <a href="https://github.com/Arcadia-Science/ProteinCartography/releases/tag/v0.5.0">v0.5.0</a> using human HRas and KRas as our inputs for a single run (UniProt ID: <a href="https://www.uniprot.org/uniprotkb/P01112/entry">P01112</a> and <a href="https://www.uniprot.org/uniprotkb/P01116/entry">P01116</a>). We asked for 3,000 Foldseek hits and 7,000 BLAST hits for a total of 10,000 structures. The updated configuration file is in the zipped folder in this repository. Also included in the zipped folder are the inputs, structures of all hits, and all ProteinCartography results. </p> <p>Finally, we created a custom overlay for the protein map using this <a href="https://github.com/Arcadia-Science/2023-actin-embedding/blob/main/notebooks/3_plotting_overlays.ipynb">notebook</a> and the manually annotated TSV file in this repository, where we denoted which group of substrates a protein is predicted to act on based on its annotation from UniProt.</p>
Hydraulic model (HEC-RAS) of downstream of Tuttle Creek Reservoir at the confluence of the Big Blue River and the Kansas River near Manhattan, KS
<p>A 2D Hydraulic model (HEC-RAS) for below Tuttle Creek Reservoir at the confluence of the Kansas River and the Big Blue River near Manhattan, KS is presented. Model geometry is based on United States Geological Survey (USGS) 3DEP data (2015), with underwater bathymetry "burned" in using cross-sections sampled in the field in April of 2023. The model was calibrated based on water surface measured during data collection. The hydraulic simulations correspond to streamflows during which fish monitoring data were collected by researchers at Kansas State University (L. Rowley and K. Gido, to be published). Results from the hydraulic model, coupled with a sediment transport model, will be used to study fish and macroinvertabrate ecological response to streamflow.</p>
SASDM65 – Candida albicans Ras-like protein 1
Open the record for dataset details and reuse information.
SASDM55 – GTP-binding domain of Candida albicans Ras-like protein 1
Open the record for dataset details and reuse information.
Fig. 5 in Test Of Different Feeding Regimes And Diets For Rearing Cyprinus Carpio Larvae In Closed Ras
Fig. 5. Larvae mortality.
Fig. 2 in Test Of Different Feeding Regimes And Diets For Rearing Cyprinus Carpio Larvae In Closed Ras
Fig. 2. Water temperature in RAS and larvae mortality.
Fig.7 in Test Of Different Feeding Regimes And Diets For Rearing Cyprinus Carpio Larvae In Closed Ras
Fig.7. Carp weight in four month (in the fishpond and RAS).
Fig.1 in Test Of Different Feeding Regimes And Diets For Rearing Cyprinus Carpio Larvae In Closed Ras
Fig.1. Feeding regimes for each group.
Inputs for 2D HEC-RAS model for sensitivity analysis of DEM and mesh grid resolutions over part of the Virginia Tech StREAM Lab
<p>Inputs into a 2D HEC-RAS model used in the article written by Elizabeth M. Prior, Nathan Michaelson, Jonathan A. Czuba, Thomas J. Pingel, Valerie A. Thomas, and W. Cully Hession titled "Lidar DEM and computational mesh grid resolutions modify roughness in 2D hydrodynamic models".</p>
Excited state observation of active K-Ras reveals differential structural dynamics of wild-type versus oncogenic G12D and G12C mutants
<p>Despite the prominent role of the K-Ras protein in many different types of human cancer, major gaps in atomic-level information severely limit our understanding of K-Ras function in health and disease. Here, we report the quantitative backbone structural dynamics of K-Ras by solution NMR spectroscopy of the active state of wild-type K-Ras·GTP and two of its oncogenic P-loop mutants, G12D and G12C, using a novel nanoparticle-assisted spin relaxation method, relaxation dispersion and chemical exchange saturation transfer experiments covering the entire range of timescales from picosecond to milliseconds. Our combined experiments allow the detection and analysis of the functionally critical Switch I and Switch II regions that have previously remained largely unobservable by X-ray crystallography and NMR spectroscopy. Our data reveal cooperative transitions of K-Ras·GTP to a highly dynamic excited state that closely resembles the partially disordered K-Ras·GDP state. These results advance our understanding of differential GTPase activities and signaling properties of the WT versus mutants and may thus guide new strategies for the development of therapeutics.</p>
Study of Binimetinib + Nivolumab Plus or Minus Ipilimumab in Patients With Previously Treated Microsatellite-stable (MSS) Metastatic Colorectal Cancer With RAS Mutation
ClinicalTrials.gov study NCT03271047. IPD Sharing: YES. Countries: 5. Publications: 1.
Phase Ib/II Study of Efficacy and Safety of MEK162 and Panitumumab, in Adult mCRC Patients With Mutant or Wild-type RAS Tumors
ClinicalTrials.gov study NCT01927341. IPD Sharing: YES. Countries: 7. Publications: 1.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.