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219
datasets available to search
ShareScore release 0.9.0
Dataset results
219 results for “Ribosomal proteins”
Ribosomal stalk proteins RPLP1 and RPLP2 promote biogenesis of flaviviral and cellular multi-pass transmembrane proteins
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The ribosome-inactivating proteins MAP30 and Momordin inhibit SARS-CoV-2
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Ribosome profiling reveals a functional role for autophagy in protein translational control
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The ribosome lowers the entropic penalty of protein folding
<p>This dataset contains concatenated MD trajectories for unfolded, isolated FLN5 A3A3 (iso.pdb and iso_traj.xtc) and the unfolded FLN5+31 A3A3 ribosome-nascent chain complex (RNC, nc.pdb and nc_traj.xtc). A representative structure of the ribosome model used in the simulations is also provided (ribosome_sim.pdb). Numpy array files (ending in .npy) contain the weights obtained for every frame in the ensembles after reweighting with PRE-NMR data. Text files including the trajectory frames (1-indexed, frames_nc.ndx and frames_iso.ndx) corresponding to the weights are also included (a few frames were removed because MTSL/spinlabel rotamers could not be accomdated sterically to allow for PRE calculations at protein labelling sites of interest). Both ensembles consist of ~100,000 frames. The FLN5 A3A3 ensemble was generated from ten independent MD trajectories of 2 microseconds, and FLN5+31 A3A3 consists of ten independent simulations lasting 1.5 microseconds (20 and 15 microseconds total, respectively). Independent simulations were initiated from different starting structures. The *.tar files contain initial coordinate files, MD input files and topologies. </p>
Data from: Generality of toxins in defensive symbiosis: ribosome-inactivating proteins and defense against parasitic wasps in Drosophila
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MYSM1 maintains ribosomal protein gene expression in hematopoietic stem cells to prevent hematopoietic dysfunction II.
GEO Series GSE150666. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Subfunctionalized expression drives evolutionary retention of ribosomal protein paralogs Rps27 and Rps27l in vertebrates
GEO Series GSE201845. Mus musculus. 15 samples. Type: Other.
Ribosomal Protein Gene Deletions in Diamond Blackfan Anemia
GEO Series GSE31575. Homo sapiens. 74 samples. Type: Genome variation profiling by SNP array; Genome variation profiling by genome tiling array.
Robust single-cell discovery of RNA targets of RNA binding proteins and ribosomes [RNA-seq]
GEO Series GSE155649. Homo sapiens. 77 samples. Type: Other.
Cellular response to small molecules that selectively stall protein synthesis by the ribosome
GEO Series GSE121981. Homo sapiens. 9 samples. Type: Other.
Enhancing co-translational folding of heterologous protein by deleting non-essential ribosomal proteins in Pichia pastoris
GEO Series GSE116415. Komagataella pastoris. 60 samples. Type: Expression profiling by high throughput sequencing.
mRNA regions where 80S ribosomes pause during translation elongation in vivo interact with protein uS19, a component of the decoding site
GEO Series GSE128265. Homo sapiens. 6 samples. Type: Other.
Transcriptome analysis of V338Y mutant mitochondrial ribosomal protein in mouse muscle tissue
GEO Series GSE107520. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Ligation-Free Ribosome Profiling Reveals Cell Type-Specific Regulation of Protein Synthesis in the Brain
GEO Series GSE78163. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing; Other.
Ribosomal protein S6 phospho-deficient mice display altered novelty-induced locomotion, synaptic plasticity, and specific mRNA translation
GEO Series GSE98029. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Simultaneous activation of Tor and suppression of ribosome biogenesis by TRIM-NHL proteins promotes terminal differentiation
GEO Series GSE218205. Drosophila melanogaster. 6 samples. Type: Expression profiling by high throughput sequencing.
Mutant huntingtin stalls ribosomes and represses protein synthesis in a cellular model of Huntington disease [Ribo-seq]
GEO Series GSE146674. Mus musculus. 9 samples. Type: Other.
Genome-wide reporter screen for transcriptional regulators of ribosome biogenesis genes and ribosomal protein genes
GEO Series GSE207900. synthetic construct. 19 samples. Type: Other.
The ribosome synchronizes folding and assembly to promote oligomeric protein biogenesis
GEO Series GSE291748. Escherichia coli. 4 samples. Type: Other.
The nucleolar aberrancies that drive ribosome impairment induced by RNA binding proteins are hallmarks of aging
GEO Series GSE242038. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.