Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
51
datasets available to search
ShareScore release 0.9.0
Dataset results
51 results for “Sampling Standardization”
CONCOCT 1.0.0 genome binning of the CAMI 2 Mouse Gut Toy data set, samples 0-63, gold standard pooled assembly
Genome binning of the gold standard pooled assembly <br><strong>Software: </strong>CONCOCT<br><strong>SoftwareVersion: </strong>1.0.0<br><strong>DataURL: </strong> https://data.cami-challenge.org/participate<br><strong>SoftwareURL:</strong> https://github.com/BinPro/CONCOCT<br><strong>DockerImage:</strong> quay.io/biocontainers/concoct:1.0.0--py37h88e4a8a_5<br><strong>IsBiobox:</strong> No<br><strong>ShortReadsUsed:</strong> True<br><strong>LongReadsUsed:</strong> False<br><strong>CommandUsed:</strong> for i in {0..63}; do bowtie2 -q --threads 30 --fr -x anonymous_gsa_pooled.fasta --interleaved sample_${i}/anonymous_reads.fq -S anonymous_reads_sample_${i}.sam ; done<br>for i in {0..63}; do samtools view -b sample_${i}.sam -o anonymous_reads_sample_${i}.bam & done<br>for i in {0..63}; do samtools sort anonymous_reads_sample_${i}.bam -o anonymous_reads_sample_${i}.sorted.bam ; done<br>for i in {0..63}; do samtools index anonymous_reads_sample_${i}.sorted.bam ; done<br>cut_up_fasta.py anonymous_gsa_pooled.fasta -c 10000 -o 0 --merge_last -b contigs_10K.bed > contigs_10K.fa<br>concoct_coverage_table.py contigs_10K.bed /host/benchmarking/fmeyer/output/bowtie2/mouse_gut/sorted_bam/anonymous_reads_sample_*.sorted.bam > coverage_table.tsv<br>concoct --composition_file contigs_10K.fa --coverage_file coverage_table.tsv -b<br>merge_cutup_clustering.py clustering_gt1000.csv > clustering_merged.csv
MaxBin 2.2.7 genome binning of the CAMI 2 Mouse Gut Toy data set, samples 0-63, gold standard pooled assembly
Genome binning of the gold standard pooled assembly <br><strong>Software: </strong>MaxBin<br><strong>SoftwareVersion: </strong>2.2.7<br><strong>DataURL: </strong> https://data.cami-challenge.org/participate<br><strong>SoftwareURL:</strong> https://sourceforge.net/projects/maxbin/<br><strong>DockerImage:</strong> cami/maxbin:2.2.7<br><strong>IsBiobox:</strong> No<br><strong>ShortReadsUsed:</strong> True<br><strong>LongReadsUsed:</strong> False<br><strong>CommandUsed:</strong> run_MaxBin.pl -thread 16 -contig anonymous_gsa_pooled.fasta -out output -reads sample_0/reads/anonymous_reads.fq -reads2 sample_1/reads/anonymous_reads.fq -reads3 sample_2/reads/anonymous_reads.fq -reads4 sample_3/reads/anonymous_reads.fq -reads5 sample_4/reads/anonymous_reads.fq -reads6 sample_5/reads/anonymous_reads.fq -reads7 sample_6/reads/anonymous_reads.fq -reads8 sample_7/reads/anonymous_reads.fq -reads9 sample_8/reads/anonymous_reads.fq -reads10 sample_9/reads/anonymous_reads.fq -reads11 sample_10/reads/anonymous_reads.fq -reads12 sample_11/reads/anonymous_reads.fq -reads13 sample_12/reads/anonymous_reads.fq -reads14 sample_13/reads/anonymous_reads.fq -reads15 sample_14/reads/anonymous_reads.fq -reads16 sample_15/reads/anonymous_reads.fq -reads17 sample_16/reads/anonymous_reads.fq -reads18 sample_17/reads/anonymous_reads.fq -reads19 sample_18/reads/anonymous_reads.fq -reads20 sample_19/reads/anonymous_reads.fq -reads21 sample_20/reads/anonymous_reads.fq -reads22 sample_21/reads/anonymous_reads.fq -reads23 sample_22/reads/anonymous_reads.fq -reads24 sample_23/reads/anonymous_reads.fq -reads25 sample_24/reads/anonymous_reads.fq -reads26 sample_25/reads/anonymous_reads.fq -reads27 sample_26/reads/anonymous_reads.fq -reads28 sample_27/reads/anonymous_reads.fq -reads29 sample_28/reads/anonymous_reads.fq -reads30 sample_29/reads/anonymous_reads.fq -reads31 sample_30/reads/anonymous_reads.fq -reads32 sample_31/reads/anonymous_reads.fq -reads33 sample_32/reads/anonymous_reads.fq -reads34 sample_33/reads/anonymous_reads.fq -reads35 sample_34/reads/anonymous_reads.fq -reads36 sample_35/reads/anonymous_reads.fq -reads37 sample_36/reads/anonymous_reads.fq -reads38 sample_37/reads/anonymous_reads.fq -reads39 sample_38/reads/anonymous_reads.fq -reads40 sample_39/reads/anonymous_reads.fq -reads41 sample_40/reads/anonymous_reads.fq -reads42 sample_41/reads/anonymous_reads.fq -reads43 sample_42/reads/anonymous_reads.fq -reads44 sample_43/reads/anonymous_reads.fq -reads45 sample_44/reads/anonymous_reads.fq -reads46 sample_45/reads/anonymous_reads.fq -reads47 sample_46/reads/anonymous_reads.fq -reads48 sample_47/reads/anonymous_reads.fq -reads49 sample_48/reads/anonymous_reads.fq -reads50 sample_49/reads/anonymous_reads.fq -reads51 sample_50/reads/anonymous_reads.fq -reads52 sample_51/reads/anonymous_reads.fq -reads53 sample_52/reads/anonymous_reads.fq -reads54 sample_53/reads/anonymous_reads.fq -reads55 sample_54/reads/anonymous_reads.fq -reads56 sample_55/reads/anonymous_reads.fq -reads57 sample_56/reads/anonymous_reads.fq -reads58 sample_57/reads/anonymous_reads.fq -reads59 sample_58/reads/anonymous_reads.fq -reads60 sample_59/reads/anonymous_reads.fq -reads61 sample_60/reads/anonymous_reads.fq -reads62 sample_61/reads/anonymous_reads.fq -reads63 sample_62/reads/anonymous_reads.fq -reads64 sample_63/reads/anonymous_reads.fq
Data from: DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity
Documenting the diversity of marine life is challenging because many species are cryptic, small, and rare, and belong to poorly known groups. New sequencing technologies, especially when combined with standardized sampling, promise to make comprehensive biodiversity assessments and monitoring feasible on a large scale. We used this approach to characterize patterns of diversity on oyster reefs across a range of geographic scales comprising a temperate location [Virginia (VA)] and a subtropical location [Florida (FL)]. Eukaryotic organisms that colonized multilayered settlement surfaces (autonomous reef monitoring structures) over a 6-mo period were identified by cytochrome c oxidase subunit I barcoding (>2-mm mobile organisms) and metabarcoding (sessile and smaller mobile organisms). In a total area of ∼15.64 m2 and volume of ∼0.09 m3, 2,179 operational taxonomic units (OTUs) were recorded from 983,056 sequences. However, only 10.9% could be matched to reference barcodes in public databases, with only 8.2% matching barcodes with both genus and species names. Taxonomic coverage was broad, particularly for animals (22 phyla recorded), but 35.6% of OTUs detected via metabarcoding could not be confidently assigned to a taxonomic group. The smallest size fraction (500 to 106 μm) was the most diverse (more than two-thirds of OTUs). There was little taxonomic overlap between VA and FL, and samples separated by ∼2 m were significantly more similar than samples separated by ∼100 m. Ground-truthing with independent assessments of taxonomic composition indicated that both presence–absence information and relative abundance information are captured by metabarcoding data, suggesting considerable potential for ecological studies and environmental monitoring.
Data from: Deep COI sequencing of standardized benthic samples unveils overlooked diversity of Jordanian coral reefs in the Northern Red Sea
High-Throughput Sequencing (HTS) of DNA barcodes (metabarcoding), particularly when combined with standardized sampling protocols, is one of the most promising approaches for censusing overlooked cryptic invertebrate communities. We present biodiversity estimates based on sequencing of the cytochrome c oxidase subunit 1 (COI) gene for coral reefs of the Gulf of Aqaba, a semi-enclosed system in the Northern Red Sea. Samples were obtained from standardized sampling devices [Autonomous Reef Monitoring Structures (ARMS)] deployed for 18 months. DNA barcoding of non-sessile specimens >2mm revealed 83 OTUs in six phyla, of which only 25% matched a reference sequence in public databases. Metabarcoding of the 2mm-500μm and sessile bulk fractions revealed 1197 OTUs in 15 animal phyla, of which only 4.9% matched reference barcodes. These results highlight the scarcity of COI data for cryptobenthic organisms of the Red Sea. Compared with data obtained using similar methods, our results suggest that Gulf of Aqaba reefs are less diverse than two Pacific coral reefs but much more diverse than an Atlantic oyster reef at a similar latitude. The standardized approaches used here show promise for establishing baseline data on biodiversity, monitoring the impacts of environmental change, and quantifying patterns of diversity at regional and global scales.
ECCO v4 standard analysis sample (v4r5-rc2)
<p>Generated from the ECCO output (version 4, release 5, release candidate 2) available to download from ecco-group.org using a Julia workflow available from OceanStateEstimation.jl (see the docs).</p>
Grinding Versus Standard Methods for the Treatment of Per-operative Bacteriological Samples Associated With Osteo-articular Sepsis
ClinicalTrials.gov study NCT02598141. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Molecular Analysis of Blood Samples in Standardized Cancer Care Referrals for SCAN and CUP
ClinicalTrials.gov study NCT04025970. IPD Sharing: NO. Countries: 1. Publications: 2.
Data from: DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity
Open the record for dataset details and reuse information.
Data from: Deep COI sequencing of standardized benthic samples unveils overlooked diversity of Jordanian coral reefs in the Northern Red Sea
Open the record for dataset details and reuse information.
Appendix Measurements for species of Breviphysoderes gen. nov., Macrophysoderes gen. nov., Nanophysoderes gen. nov., Paraphysoderes Villiers, 1962 and Physoderes Westwood, 1945 (in mm). Numbers in parentheses beside mean values refer to sample size. SD = Standard deviation. In the USI column, UCR _ ENT catalogue numbers are referred to by the number only. in Uncovering hidden diversity: phylogeny and taxonomy of Physoderinae (Reduviidae, Heteroptera), with emphasis on Physoderes Westwood in the Oriental and Australasian regions
<p><b>Appendix</b> Measurements for species of <i>Breviphysoderes</i> gen. nov., <i>Macrophysoderes</i> gen. nov., <i>Nanophysoderes</i> gen. nov., <i>Paraphysoderes</i> Villiers, 1962 and <i>Physoderes</i> Westwood, 1945 (in mm). Numbers in parentheses beside mean values refer to sample size. SD = Standard deviation. In the USI column, UCR _ENT catalogue numbers are referred to by the number only.</p><table><thead><tr><th>Species</th><th>Sex</th><th>USI</th><th>Total Length</th><th>Head length</th><th>Eye length</th><th>Eye width</th><th>Anterior lobe (l)</th><th colspan="2">Pronotum Anterior Posterior lobe (w) lobe (l)</th><th>Posterior lobe (w)</th><th>Hemelytron length</th><th>Scape length</th><th>Interocular distance</th><th>Postocular lobe width</th><th>Abdomen width</th></tr><tr><th colspan="16"><b><i>Breviphysoderes</i> gen. nov.</b></th></tr></thead><tbody><tr><th><i>B. decora</i></th><td>♀</td><td>Mean (5)</td><td>9.19</td><td>2.02</td><td>0.40</td><td>1.06</td><td>0.98</td><td>2.18</td><td>1.08</td><td>2.96</td><td>5.41</td><td>0.55</td><td>0.59</td><td>0.88</td><td>3.76</td></tr><tr><th></th><td></td><td>SD</td><td>0.33</td><td>0.19</td><td>0.03</td><td>0.05</td><td>0.09</td><td>0.12</td><td>0.14</td><td>0.17</td><td>0.18</td><td>0.03</td><td>0.06</td><td>0.04</td><td>0.20</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.81</td><td>1.79</td><td>0.38</td><td>0.99</td><td>0.90</td><td>2.06</td><td>0.89</td><td>2.75</td><td>5.12</td><td>0.51</td><td>0.51</td><td>0.85</td><td>3.56</td></tr><tr><th></th><td></td><td>Maximum</td><td>9.53</td><td>2.24</td><td>0.46</td><td>1.11</td><td>1.09</td><td>2.32</td><td>1.26</td><td>3.14</td><td>5.63</td><td>0.58</td><td>0.65</td><td>0.94</td><td>4.05</td></tr><tr><th><i>B. mjoebergi</i></th><td>♂</td><td>Mean (3)</td><td>7.91</td><td>1.62</td><td>0.37</td><td>0.96</td><td>0.89</td><td>2.02</td><td>1.11</td><td>2.74</td><td>4.41</td><td>0.53</td><td>0.56</td><td>0.83</td><td>3.31</td></tr><tr><th></th><td></td><td>SD</td><td>0.43</td><td>0.21</td><td>0.02</td><td>0.03</td><td>0.11</td><td>0.06</td><td>0.24</td><td>0.14</td><td>0.41</td><td>0.03</td><td>0.04</td><td>0.03</td><td>0.23</td></tr><tr><th></th><td></td><td>Minimum</td><td>7.49</td><td>1.39</td><td>0.36</td><td>0.95</td><td>0.77</td><td>1.96</td><td>0.94</td><td>2.61</td><td>3.96</td><td>0.50</td><td>0.52</td><td>0.79</td><td>3.06</td></tr><tr><th></th><td></td><td>Maximum</td><td>8.35</td><td>1.82</td><td>0.39</td><td>1.00</td><td>0.97</td><td>2.08</td><td>1.38</td><td>2.88</td><td>4.77</td><td>0.57</td><td>0.59</td><td>0.85</td><td>3.50</td></tr><tr><th></th><td>♀</td><td>Mean (5)</td><td>8.76</td><td>1.82</td><td>0.47</td><td>1.03</td><td>1.00</td><td>2.23</td><td>1.08</td><td>2.91</td><td>5.03</td><td>0.56</td><td>0.61</td><td>0.87</td><td>3.76</td></tr><tr><th></th><td></td><td>SD</td><td>0.69</td><td>0.12</td><td>0.23</td><td>0.06</td><td>0.15</td><td>0.23</td><td>0.14</td><td>0.22</td><td>0.52</td><td>0.05</td><td>0.03</td><td>0.03</td><td>0.40</td></tr><tr><th></th><td></td><td>Minimum</td><td>7.91</td><td>1.68</td><td>0.32</td><td>0.98</td><td>0.87</td><td>1.97</td><td>0.97</td><td>2.63</td><td>4.36</td><td>0.51</td><td>0.57</td><td>0.84</td><td>3.31</td></tr><tr><th></th><td></td><td>Maximum</td><td>10.23</td><td>2.08</td><td>0.38</td><td>1.07</td><td>1.50</td><td>3.18</td><td>1.24</td><td>3.35</td><td>6.20</td><td>0.69</td><td>0.65</td><td>0.93</td><td>4.07</td></tr><tr><th><i>B. vestita</i></th><td>♀</td><td>Mean (5)</td><td>9.13</td><td>1.84</td><td>0.33</td><td>1.01</td><td>1.06</td><td>2.29</td><td>1.09</td><td>2.89</td><td>5.46</td><td>0.60</td><td>0.63</td><td>0.88</td><td>3.95</td></tr><tr><th></th><td></td><td>SD</td><td>0.30</td><td>0.18</td><td>0.03</td><td>0.02</td><td>0.04</td><td>0.17</td><td>0.06</td><td>0.13</td><td>0.14</td><td>0.03</td><td>0.03</td><td>0.03</td><td>0.16</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.74</td><td>1.57</td><td>0.29</td><td>0.99</td><td>1.01</td><td>2.05</td><td>1.02</td><td>2.73</td><td>5.26</td><td>0.56</td><td>0.59</td><td>0.83</td><td>3.73</td></tr><tr><th></th><td></td><td>Maximum</td><td>9.54</td><td>2.04</td><td>0.38</td><td>1.04</td><td>1.12</td><td>2.46</td><td>1.18</td><td>3.08</td><td>5.58</td><td>0.64</td><td>0.67</td><td>0.92</td><td>4.15</td></tr><tr><th><b><i>Macrophysoderes</i> gen. nov.</b></th><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th><i>M. cirripilosa</i> gen. et sp. nov.</th><td>♂</td><td>Mean (16)</td><td>8.7</td><td>1.66</td><td>0.34</td><td>0.98</td><td>0.95</td><td>2.24</td><td>1.01</td><td>2.82</td><td>5.32</td><td>0.46</td><td>0.62</td><td>0.85</td><td>3.25</td></tr><tr><th></th><td></td><td>SD</td><td>0.66</td><td>0.12</td><td>0.03</td><td>0.06</td><td>0.09</td><td>0.19</td><td>0.14</td><td>0.21</td><td>0.45</td><td>0.04</td><td>0.06</td><td>0.03</td><td>0.24</td></tr><tr><th></th><td></td><td>Minimum</td><td>7.8</td><td>1.45</td><td>0.29</td><td>0.84</td><td>0.81</td><td>1.88</td><td>0.77</td><td>2.4</td><td>4.71</td><td>0.4</td><td>0.56</td><td>0.79</td><td>2.72</td></tr><tr><th></th><td></td><td>Maximum</td><td>9.85</td><td>1.99</td><td>0.39</td><td>1.05</td><td>1.14</td><td>2.62</td><td>1.32</td><td>3.16</td><td>6.05</td><td>0.53</td><td>0.75</td><td>0.91</td><td>3.62</td></tr><tr><th></th><td>♀</td><td>Mean (21)</td><td>9.04</td><td>1.67</td><td>0.35</td><td>1.01</td><td>0.94</td><td>2.23</td><td>1.05</td><td>2.88</td><td>5.61</td><td>0.48</td><td>0.65</td><td>0.89</td><td>3.7</td></tr><tr><th></th><td></td><td>SD</td><td>1.12</td><td>0.19</td><td>0.05</td><td>0.09</td><td>0.12</td><td>0.27</td><td>0.15</td><td>0.31</td><td>0.8</td><td>0.05</td><td>0.06</td><td>0.07</td><td>0.42</td></tr><tr><th></th><td></td><td>Minimum</td><td>7.16</td><td>1.27</td><td>0.23</td><td>0.88</td><td>0.72</td><td>1.79</td><td>0.69</td><td>2.43</td><td>4.04</td><td>0.4</td><td>0.55</td><td>0.81</td><td>2.91</td></tr><tr><th></th><td></td><td>Maximum</td><td>11.01</td><td>1.97</td><td>0.46</td><td>1.17</td><td>1.15</td><td>2.79</td><td>1.28</td><td>3.47</td><td>7.04</td><td>0.58</td><td>0.79</td><td>1.04</td><td>4.43</td></tr><tr><th><i>M. elongata</i> gen. et sp. nov.</th><td>♂</td><td>Mean (5) SD Minimum Maximum</td><td>10.29 0.47 9.98 11.11</td><td>1.77 0.13 1.57 1.88</td><td>0.36 0.03 0.32 0.39</td><td>1.02 0.03 0.97 1.06</td><td>1.06 0.15 0.91 1.29</td><td>2.78 0.25 2.49 2.98</td><td>1.33 0.06 1.24 1.4</td><td>3.28 0.17 3.04 3.49</td><td>6.64 0.37 6.36 7.28</td><td>0.52 0.03 0.49 0.57</td><td>0.65 0.05 0.57 0.69</td><td>0.94 0.01 0.93 0.96</td><td>3.74 0.2 3.51 4.03</td></tr><tr><th></th><td>♀</td><td>Mean (4) SD Minimum Maximum</td><td>9.89 0.4 9.47 10.41</td><td>1.77 0.1 1.66 1.86</td><td>0.33 0.04 0.28 0.38</td><td>0.99 0.02 0.98 1.02</td><td>0.98 0.13 0.87 1.13</td><td>2.49 0.11 2.34 2.61</td><td>1.12 0.05 1.05 1.15</td><td>3.07 0.15 2.93 3.21</td><td>6.39 0.42 6.08 7</td><td>0.45 0.06 0.37 0.5</td><td>0.66 0 0.65 0.66</td><td>0.91 0.04 0.85 0.95</td><td>3.76 0.19 3.51 3.91</td></tr><tr><th><i>M. finisterre</i> gen. et sp. nov.</th><td>♂</td><td>Mean (5) SD Minimum Maximum</td><td>8.85 0.38 8.4 9.36</td><td>1.66 0.1 1.51 1.76</td><td>0.33 0.04 0.3 0.38</td><td>0.96 0.05 0.89 1.02</td><td>0.92 0.04 0.89 0.99</td><td>2.14 0.14 1.92 2.29</td><td>1.11 0.15 0.94 1.32</td><td>2.81 0.14 2.59 2.96</td><td>5.36 0.38 4.97 5.84</td><td>0.48 0.04 0.43 0.54</td><td>0.62 0.01 0.6 0.64</td><td>0.82 0.06 0.75 0.9</td><td>3.23 0.19 2.92 3.38</td></tr><tr><th></th><td>♀</td><td>Mean (5) SD Minimum Maximum</td><td>9.12 0.48 8.53 9.8</td><td>1.74 0.02 1.71 1.76</td><td>0.35 0.04 0.3 0.4</td><td>0.99 0.04 0.95 1.04</td><td>0.98 0.07 0.91 1.08</td><td>2.14 0.13 2.05 2.36</td><td>1.12 0.14 0.98 1.35</td><td>2.86 0.18 2.74 3.18</td><td>5.52 0.39 4.94 5.97</td><td>0.48 0.05 0.43 0.55</td><td>0.64 0.04 0.6 0.67</td><td>0.85 0.04 0.8 0.92</td><td>3.7 0.25 3.43 4.11</td></tr><tr><th><i>M. histrionica</i></th><td>♂</td><td>00018520</td><td>8.5</td><td>-</td><td>-</td><td>-</td><td>-</td><td>-</td><td>-</td><td>2.8</td><td>5</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><th><i>M. grandis</i> gen. et sp. nov.</th><td>♂ ♀</td><td>00052314 00073625</td><td>11.58 12.66</td><td>1.59 2.02</td><td>0.48 0.5</td><td>1.31 1.33</td><td>1.03 1.33</td><td>2.65 2.82</td><td>1.64 1.69</td><td>3.74 4.03</td><td>7.71 8.21</td><td>0.75 0.75</td><td>0.62 0.67</td><td>1.01 1.01</td><td>4.28 4.86</td></tr><tr><th><i>M. modesta</i></th><td>♂ ♀</td><td>00069386 00069384</td><td>9.45 -1.82</td><td>1.94 2.13</td><td>0.35 0.36</td><td>1.06 1.28</td><td>1.08 1.24</td><td>2.14 2.56</td><td>1.27 1.52</td><td>2.95 3.71</td><td>5.49 7.37</td><td>0.52 0.58</td><td>0.59 0.73</td><td>0.88 0.96</td><td>3.46 4.47</td></tr><tr><th><i>M. monticola</i></th><td>♂ ♀</td><td>00069387 Mean (3) SD Minimum Maximum</td><td>10.34 9.88 0.72 9.11 10.53</td><td>1.81 1.98 0.11 1.89 2.11</td><td>0.29 0.35 0.01 0.34 0.37</td><td>1.06 1.08 0.06 1.02 1.13</td><td>0.96 0.93 0.09 0.84 1</td><td>2.29 2.32 0.2 2.1 2.48</td><td>1.37 1.26 0.22 1.06 1.49</td><td>3.36 3.24 0.29 2.93 3.51</td><td>6.35 5.99 0.3 5.65 6.21</td><td>0.49 0.47 0.02 0.44 0.49</td><td>0.63 0.66 0.04 0.62 0.69</td><td>0.91 0.93 0.02 0.91 0.96</td><td>4.19 4 0.34 3.68 4.36</td></tr><tr><th><b><i>Nanophysoderes</i> gen. nov.</b> <i>N. dentiscutum</i></th><td>♂</td><td>00037370</td><td>7.66</td><td>1.55</td><td>0.33</td><td>0.89</td><td>0.76</td><td>1.86</td><td>0.86</td><td>2.34</td><td>4.58</td><td>0.42</td><td>0.52</td><td>0.79</td><td>2.8</td></tr><tr><th><i>Paraphysoderes</i></th><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th><i>Pa. popeye</i> sp. nov.</th><td>♂</td><td>00073584</td><td>7.09</td><td>1.27</td><td>0.26</td><td>0.83</td><td>0.78</td><td>1.57</td><td>0.84</td><td>2.22</td><td>4.35</td><td>0.43</td><td>0.59</td><td>0.69</td><td>2.56</td></tr><tr><th></th><td>♀</td><td>Mean (5)</td><td>7.89</td><td>1.55</td><td>0.29</td><td>0.98</td><td>1</td><td>1.96</td><td>0.84</td><td>2.61</td><td>4.69</td><td>0.51</td><td>0.66</td><td>0.76</td><td>3.32</td></tr><tr><th></th><td></td><td>SD</td><td>0.44</td><td>0.21</td><td>0.02</td><td>0.02</td><td>0.06</td><td>0.18</td><td>0.07</td><td>0.14</td><td>0.23</td><td>0.07</td><td>0.03</td><td>0.01</td><td>0.14</td></tr><tr><th></th><td></td><td>Minimum</td><td>7.47</td><td>1.25</td><td>0.27</td><td>0.95</td><td>0.95</td><td>1.8</td><td>0.76</td><td>2.5</td><td>4.46</td><td>0.42</td><td>0.63</td><td>0.75</td><td>3.17</td></tr><tr><th></th><td></td><td>Maximum</td><td>8.41</td><td>1.83</td><td>0.33</td><td>1.01</td><td>1.1</td><td>2.25</td><td>0.93</td><td>2.77</td><td>5.02</td><td>0.61</td><td>0.69</td><td>0.78</td><td>3.54</td></tr><tr><th><i>Physoderes</i></th><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td><td></td></tr><tr><th><i>P.anamalaiensis</i> sp. nov.</th><td>♂</td><td>Mean (5)</td><td>9.27</td><td>1.93</td><td>0.32</td><td>1.01</td><td>1.33</td><td>2.85</td><td>0.87</td><td>2.83</td><td>5.44</td><td>0.49</td><td>0.65</td><td>0.85</td><td>3.56</td></tr><tr><th></th><td></td><td>SD</td><td>0.36</td><td>0.04</td><td>0.02</td><td>0.03</td><td>0.09</td><td>0.29</td><td>0.11</td><td>0.16</td><td>0.19</td><td>0.04</td><td>0.01</td><td>0.03</td><td>0.13</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.91</td><td>1.87</td><td>0.28</td><td>0.98</td><td>1.23</td><td>2.45</td><td>0.73</td><td>2.64</td><td>5.17</td><td>0.42</td><td>0.64</td><td>0.82</td><td>3.41</td></tr><tr><th></th><td></td><td>Maximum</td><td>9.82</td><td>1.97</td><td>0.35</td><td>1.05</td><td>1.46</td><td>3.1</td><td>1.02</td><td>2.96</td><td>5.62</td><td>0.53</td><td>0.67</td><td>0.89</td><td>3.74</td></tr><tr><th></th><td>♀</td><td>Mean (5)</td><td>9.13</td><td>1.97</td><td>0.33</td><td>0.97</td><td>1.13</td><td>2.51</td><td>0.96</td><td>2.84</td><td>5.24</td><td>0.49</td><td>0.63</td><td>0.87</td><td>3.77</td></tr><tr><th></th><td></td><td>SD</td><td>0.27</td><td>0.12</td><td>0.03</td><td>0.04</td><td>0.05</td><td>0.15</td><td>0.15</td><td>0.09</td><td>0.18</td><td>0.03</td><td>0.08</td><td>0.02</td><td>0.19</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.92</td><td>1.85</td><td>0.3</td><td>0.94</td><td>1.07</td><td>2.31</td><td>0.77</td><td>2.75</td><td>5.03</td><td>0.47</td><td>0.54</td><td>0.85</td><td>3.55</td></tr><tr><th></th><td></td><td>Maximum</td><td>9.59</td><td>2.14</td><td>0.36</td><td>1.03</td><td>1.17</td><td>2.72</td><td>1.1</td><td>2.99</td><td>5.48</td><td>0.53</td><td>0.74</td><td>0.91</td><td>4.07</td></tr><tr><th><i>P. azrael</i></th><td>♂</td><td>Mean (5)</td><td>8.58</td><td>1.63</td><td>0.3</td><td>0.89</td><td>0.97</td><td>2.58</td><td>0.94</td><td>2.75</td><td>5.29</td><td>0.39</td><td>0.59</td><td>0.85</td><td>3.1</td></tr><tr><th></th><td></td><td>SD</td><td>0.16</td><td>0.08</td><td>0.02</td><td>0.02</td><td>0.06</td><td>0.18</td><td>0.07</td><td>0.11</td><td>0.15</td><td>0.02</td><td>0.03</td><td>0.03</td><td>0.13</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.39</td><td>1.52</td><td>0.27</td><td>0.86</td><td>0.9</td><td>2.33</td><td>0.83</td><td>2.6</td><td>5.11</td><td>0.36</td><td>0.55</td><td>0.82</td><td>2.94</td></tr><tr><th></th><td></td><td>Maximum</td><td>8.76</td><td>1.7</td><td>0.32</td><td>0.91</td><td>1.05</td><td>2.71</td><td>1</td><td>2.87</td><td>5.49</td><td>0.41</td><td>0.62</td><td>0.88</td><td>3.24</td></tr><tr><th></th><td>♀</td><td>Mean (5)</td><td>8.61</td><td>1.61</td><td>0.29</td><td>0.89</td><td>0.86</td><td>2.13</td><td>0.92</td><td>2.68</td><td>5.41</td><td>0.42</td><td>0.6</td><td>0.86</td><td>3.21</td></tr><tr><th></th><td></td><td>SD</td><td>0.27</td><td>0.06</td><td>0.02</td><td>0.04</td><td>0.04</td><td>0.07</td><td>0.04</td><td>0.09</td><td>0.19</td><td>0.05</td><td>0.03</td><td>0.02</td><td>0.06</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.14</td><td>1.51</td><td>0.26</td><td>0.83</td><td>0.8</td><td>2.04</td><td>0.85</td><td>2.55</td><td>5.13</td><td>0.36</td><td>0.55</td><td>0.84</td><td>3.13</td></tr><tr><th></th><td></td><td>Maximum</td><td>8.83</td><td>1.67</td><td>0.31</td><td>0.93</td><td>0.91</td><td>2.22</td><td>0.96</td><td>2.77</td><td>5.64</td><td>0.49</td><td>0.62</td><td>0.88</td><td>3.26</td></tr><tr><th><i>P. brevipennis</i> sp. nov.</th><td>♂</td><td>Mean (5)</td><td>6.61</td><td>1.77</td><td>0.3</td><td>0.93</td><td>1.28</td><td>2.98</td><td>0.78</td><td>2.6</td><td>2.72</td><td>0.49</td><td>0.6</td><td>0.87</td><td>3.44</td></tr><tr><th></th><td></td><td>SD</td><td>0.35</td><td>0.14</td><td>0.03</td><td>0.04</td><td>0.1</td><td>0.2</td><td>0.05</td><td>0.14</td><td>0.27</td><td>0.03</td><td>0.05</td><td>0.04</td><td>0.24</td></tr><tr><th></th><td></td><td>Minimum</td><td>6.08</td><td>1.67</td><td>0.27</td><td>0.88</td><td>1.21</td><td>2.76</td><td>0.71</td><td>2.47</td><td>2.41</td><td>0.46</td><td>0.53</td><td>0.81</td><td>3.19</td></tr><tr><th></th><td></td><td>Maximum</td><td>7.07</td><td>2.01</td><td>0.34</td><td>0.98</td><td>1.44</td><td>3.25</td><td>0.82</td><td>2.8</td><td>3.05</td><td>0.53</td><td>0.65</td><td>0.91</td><td>3.83</td></tr><tr><th></th><td>♀</td><td>Mean (5)</td><td>6.53</td><td>1.69</td><td>0.31</td><td>0.96</td><td>1.11</td><td>2.49</td><td>0.81</td><td>2.54</td><td>2.71</td><td>0.49</td><td>0.64</td><td>0.89</td><td>3.8</td></tr><tr><th></th><td></td><td>SD</td><td>0.17</td><td>0.15</td><td>0.04</td><td>0.04</td><td>0.09</td><td>0.18</td><td>0.08</td><td>0.13</td><td>0.27</td><td>0.03</td><td>0.03</td><td>0.03</td><td>0.32</td></tr><tr><th></th><td></td><td>Minimum</td><td>6.29</td><td>1.49</td><td>0.25</td><td>0.91</td><td>0.98</td><td>2.19</td><td>0.73</td><td>2.31</td><td>2.31</td><td>0.46</td><td>0.59</td><td>0.84</td><td>3.42</td></tr><tr><th></th><td></td><td>Maximum</td><td>6.73</td><td>1.87</td><td>0.34</td><td>1.01</td><td>1.2</td><td>2.65</td><td>0.91</td><td>2.66</td><td>2.97</td><td>0.54</td><td>0.68</td><td>0.93</td><td>4.14</td></tr><tr><th><i>P. curculionis</i></th><td>♂</td><td>Mean (7)</td><td>7.64</td><td>1.56</td><td>0.28</td><td>0.86</td><td>1.02</td><td>2.53</td><td>0.78</td><td>2.59</td><td>4.48</td><td>0.37</td><td>0.59</td><td>0.81</td><td>3</td></tr><tr><th></th><td></td><td>SD</td><td>0.21</td><td>0.07</td><td>0.01</td><td>0.02</td><td>0.06</td><td>0.15</td><td>0.1</td><td>0.08</td><td>0.18</td><td>0.06</td><td>0.03</td><td>0.02</td><td>0.21</td></tr><tr><th></th><td></td><td>Minimum</td><td>7.37</td><td>1.46</td><td>0.27</td><td>0.82</td><td>0.94</td><td>2.37</td><td>0.64</td><td>2.5</td><td>4.15</td><td>0.27</td><td>0.54</td><td>0.78</td><td>2.68</td></tr><tr><th></th><td></td><td>Maximum</td><td>7.9</td><td>1.67</td><td>0.29</td><td>0.88</td><td>1.11</td><td>2.74</td><td>0.93</td><td>2.69</td><td>4.63</td><td>0.44</td><td>0.65</td><td>0.83</td><td>3.35</td></tr><tr><th></th><td>♀</td><td>Mean (9)</td><td>7.47</td><td>1.52</td><td>0.27</td><td>0.86</td><td>0.91</td><td>2.19</td><td>0.86</td><td>2.54</td><td>4.46</td><td>0.39</td><td>0.58</td><td>0.82</td><td>3.14</td></tr><tr><th></th><td></td><td>SD</td><td>0.17</td><td>0.07</td><td>0.03</td><td>0.04</td><td>0.08</td><td>0.1</td><td>0.08</td><td>0.09</td><td>0.16</td><td>0.03</td><td>0.03</td><td>0.03</td><td>0.26</td></tr><tr><th></th><td></td><td>Minimum</td><td>7.23</td><td>1.38</td><td>0.23</td><td>0.82</td><td>0.79</td><td>2.07</td><td>0.72</td><td>2.46</td><td>4.12</td><td>0.36</td><td>0.53</td><td>0.77</td><td>2.5</td></tr><tr><th></th><td></td><td>Maximum</td><td>7.68</td><td>1.61</td><td>0.32</td><td>0.92</td><td>1.07</td><td>2.36</td><td>1.01</td><td>2.7</td><td>4.68</td><td>0.44</td><td>0.63</td><td>0.85</td><td>3.39</td></tr><tr><th><i>P. fuliginosa</i></th><td>♂</td><td>Mean (5)</td><td>10.47</td><td>2.01</td><td>0.34</td><td>0.99</td><td>1.45</td><td>3.42</td><td>1.15</td><td>3.31</td><td>6.24</td><td>0.55</td><td>0.65</td><td>0.94</td><td>3.82</td></tr><tr><th></th><td></td><td>SD</td><td>0.54</td><td>0.08</td><td>0.03</td><td>0.05</td><td>0.2</td><td>0.54</td><td>0.09</td><td>0.23</td><td>0.36</td><td>0.02</td><td>0.07</td><td>0.05</td><td>0.28</td></tr><tr><th></th><td></td><td>Minimum</td><td>9.84</td><td>1.89</td><td>0.29</td><td>0.93</td><td>1.22</td><td>2.85</td><td>1.06</td><td>3.1</td><td>5.84</td><td>0.52</td><td>0.56</td><td>0.89</td><td>3.54</td></tr><tr><th></th><td></td><td>Maximum</td><td>11.03</td><td>2.08</td><td>0.36</td><td>1.04</td><td>1.69</td><td>4</td><td>1.28</td><td>3.63</td><td>6.56</td><td>0.57</td><td>0.74</td><td>1.01</td><td>4.19</td></tr><tr><th></th><td>♀</td><td>Mean (5)</td><td>10.14</td><td>2</td><td>0.38</td><td>1.01</td><td>1</td><td>2.39</td><td>1.34</td><td>3.2</td><td>6.2</td><td>0.5</td><td>0.64</td><td>0.92</td><td>4.04</td></tr><tr><th></th><td></td><td>SD</td><td>0.49</td><td>0.05</td><td>0.04</td><td>0.07</td><td>0.08</td><td>0.18</td><td>0.12</td><td>0.15</td><td>0.37</td><td>0.03</td><td>0.06</td><td>0.04</td><td>0.26</td></tr><tr><th></th><td></td><td>Minimum</td><td>9.59</td><td>1.92</td><td>0.33</td><td>0.93</td><td>0.9</td><td>2.19</td><td>1.22</td><td>3</td><td>5.72</td><td>0.49</td><td>0.59</td><td>0.88</td><td>3.8</td></tr><tr><th></th><td></td><td>Maximum</td><td>10.89</td><td>2.03</td><td>0.44</td><td>1.12</td><td>1.1</td><td>2.6</td><td>1.54</td><td>3.4</td><td>6.68</td><td>0.55</td><td>0.74</td><td>0.98</td><td>4.47</td></tr><tr><th><i>P.minime</i> sp. nov.</th><td>♂</td><td>Mean (5)</td><td>8.64</td><td>2.01</td><td>0.31</td><td>0.89</td><td>1.23</td><td>2.83</td><td>0.98</td><td>2.74</td><td>4.72</td><td>0.52</td><td>0.61</td><td>0.86</td><td>3.3</td></tr><tr><th></th><td></td><td>SD</td><td>0.28</td><td>0.08</td><td>0.01</td><td>0.01</td><td>0.05</td><td>0.09</td><td>0.06</td><td>0.08</td><td>0.23</td><td>0.03</td><td>0.03</td><td>0.01</td><td>0.1</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.31</td><td>1.9</td><td>0.29</td><td>0.88</td><td>1.18</td><td>2.73</td><td>0.93</td><td>2.64</td><td>4.54</td><td>0.49</td><td>0.55</td><td>0.84</td><td>3.19</td></tr><tr><th></th><td></td><td>Maximum</td><td>9.03</td><td>2.12</td><td>0.32</td><td>0.9</td><td>1.28</td><td>2.97</td><td>1.07</td><td>2.82</td><td>5.13</td><td>0.56</td><td>0.62</td><td>0.87</td><td>3.46</td></tr><tr><th></th><td>♀</td><td>Mean (5)</td><td>8.29</td><td>1.88</td><td>0.3</td><td>0.87</td><td>0.89</td><td>2.07</td><td>1.04</td><td>2.6</td><td>4.77</td><td>0.49</td><td>0.57</td><td>0.87</td><td>3.58</td></tr><tr><th></th><td></td><td>SD</td><td>0.16</td><td>0.14</td><td>0.05</td><td>0.06</td><td>0.06</td><td>0.08</td><td>0.09</td><td>0.1</td><td>0.26</td><td>0.02</td><td>0.09</td><td>0.04</td><td>0.16</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.1</td><td>1.7</td><td>0.25</td><td>0.79</td><td>0.81</td><td>1.98</td><td>0.96</td><td>2.48</td><td>4.48</td><td>0.47</td><td>0.49</td><td>0.82</td><td>3.31</td></tr><tr><th></th><td></td><td>Maximum</td><td>8.54</td><td>2.05</td><td>0.38</td><td>0.94</td><td>0.98</td><td>2.15</td><td>1.19</td><td>2.7</td><td>5.11</td><td>0.51</td><td>0.69</td><td>0.94</td><td>3.71</td></tr><tr><th><i>P. muluensis</i> sp. nov.</th><td>♂</td><td>Mean (4)</td><td>7.35</td><td>1.73</td><td>0.3</td><td>0.91</td><td>0.9</td><td>1.95</td><td>0.95</td><td>2.43</td><td>3.96</td><td>0.49</td><td>0.56</td><td>0.82</td><td>2.83</td></tr><tr><th></th><td></td><td>SD</td><td>0.27</td><td>0.18</td><td>0.03</td><td>0.06</td><td>0.12</td><td>0.11</td><td>0.03</td><td>0.13</td><td>0.3</td><td>0.03</td><td>0.03</td><td>0.09</td><td>0.18</td></tr><tr><th></th><td></td><td>Minimum</td><td>6.99</td><td>1.46</td><td>0.27</td><td>0.84</td><td>0.77</td><td>1.82</td><td>0.93</td><td>2.26</td><td>3.61</td><td>0.46</td><td>0.53</td><td>0.74</td><td>2.61</td></tr><tr><th></th><td></td><td>Maximum</td><td>7.59</td><td>1.87</td><td>0.33</td><td>0.96</td><td>1.04</td><td>2.08</td><td>0.99</td><td>2.56</td><td>4.35</td><td>0.53</td><td>0.6</td><td>0.93</td><td>3.01</td></tr><tr><th></th><td>♀</td><td>Mean (3)</td><td>7.92</td><td>1.75</td><td>0.3</td><td>0.95</td><td>1</td><td>2.05</td><td>0.95</td><td>2.59</td><td>4.32</td><td>0.48</td><td>0.64</td><td>0.85</td><td>3.34</td></tr><tr><th></th><td></td><td>SD</td><td>0.27</td><td>0.07</td><td>0.03</td><td>0.05</td><td>0.05</td><td>0.09</td><td>0.09</td><td>0.04</td><td>0.26</td><td>0.05</td><td>0.06</td><td>0.03</td><td>0.08</td></tr><tr><th></th><td></td><td>Minimum</td><td>7.67</td><td>1.72</td><td>0.27</td><td>0.89</td><td>0.95</td><td>1.98</td><td>0.9</td><td>2.55</td><td>4.02</td><td>0.45</td><td>0.57</td><td>0.81</td><td>3.28</td></tr><tr><th></th><td></td><td>Maximum</td><td>8.21</td><td>1.83</td><td>0.32</td><td>0.99</td><td>1.06</td><td>2.15</td><td>1.06</td><td>2.62</td><td>4.5</td><td>0.54</td><td>0.69</td><td>0.87</td><td>3.43</td></tr><tr><th><i>P. mysorensis</i> sp. nov.</th><td>♂</td><td>Mean (3)</td><td>10.82</td><td>2.05</td><td>0.36</td><td>1.07</td><td>1.62</td><td>3.69</td><td>1.12</td><td>3.54</td><td>6.43</td><td>0.58</td><td>0.72</td><td>0.93</td><td>4.14</td></tr><tr><th></th><td></td><td>SD</td><td>0.14</td><td>0.11</td><td>0.08</td><td>0.05</td><td>0.1</td><td>0.26</td><td>0.1</td><td>0.12</td><td>0.21</td><td>0</td><td>0.01</td><td>0.04</td><td>0.32</td></tr><tr><th></th><td></td><td>Minimum</td><td>10.69</td><td>1.92</td><td>0.27</td><td>1.03</td><td>1.51</td><td>3.44</td><td>1.01</td><td>3.41</td><td>6.3</td><td>0.57</td><td>0.71</td><td>0.89</td><td>3.92</td></tr><tr><th></th><td></td><td>Maximum</td><td>10.96</td><td>2.14</td><td>0.42</td><td>1.12</td><td>1.71</td><td>3.95</td><td>1.21</td><td>3.63</td><td>6.67</td><td>0.58</td><td>0.73</td><td>0.97</td><td>4.37</td></tr><tr><th></th><td>♀</td><td>Mean (2)</td><td>10.7</td><td>2.08</td><td>0.34</td><td>1.08</td><td>1.45</td><td>3.11</td><td>1.17</td><td>3.56</td><td>6.48</td><td>0.58</td><td>0.66</td><td>1</td><td>4.3</td></tr><tr><th></th><td></td><td>SD</td><td>0.25</td><td>0.11</td><td>0.04</td><td>0.06</td><td>0.14</td><td>0.08</td><td>0.17</td><td>0.07</td><td>0.05</td><td>0.03</td><td>0.11</td><td>0.01</td><td>NA</td></tr><tr><th></th><td></td><td>Minimum</td><td>10.52</td><td>2</td><td>0.32</td><td>1.04</td><td>1.35</td><td>3.05</td><td>1.05</td><td>3.51</td><td>6.45</td><td>0.56</td><td>0.58</td><td>1</td><td>4.3</td></tr><tr><th></th><td></td><td>Maximum</td><td>10.88</td><td>2.15</td><td>0.36</td><td>1.12</td><td>1.56</td><td>3.16</td><td>1.29</td><td>3.61</td><td>6.52</td><td>0.61</td><td>0.74</td><td>1.01</td><td>4.3</td></tr><tr><th><i>P.nigripennis</i> sp. nov.</th><td>♂</td><td>Mean (5)</td><td>9.12</td><td>1.89</td><td>0.34</td><td>1.02</td><td>0.9</td><td>2.17</td><td>1.24</td><td>2.95</td><td>5.27</td><td>0.53</td><td>0.59</td><td>0.85</td><td>3.42</td></tr><tr><th></th><td></td><td>SD</td><td>0.29</td><td>0.08</td><td>0.03</td><td>0.05</td><td>0.07</td><td>0.09</td><td>0.07</td><td>0.1</td><td>0.16</td><td>0.07</td><td>0.05</td><td>0.04</td><td>0.22</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.76</td><td>1.77</td><td>0.29</td><td>0.96</td><td>0.83</td><td>2.04</td><td>1.13</td><td>2.82</td><td>5.09</td><td>0.46</td><td>0.53</td><td>0.79</td><td>3.16</td></tr><tr><th></th><td></td><td>Maximum</td><td>9.48</td><td>1.95</td><td>0.36</td><td>1.09</td><td>1</td><td>2.28</td><td>1.32</td><td>3.07</td><td>5.45</td><td>0.65</td><td>0.66</td><td>0.89</td><td>3.72</td></tr><tr><th></th><td>♀</td><td>Mean (5)</td><td>10.05</td><td>1.9</td><td>0.35</td><td>1.13</td><td>0.94</td><td>2.3</td><td>1.4</td><td>3.32</td><td>6.07</td><td>0.6</td><td>0.64</td><td>0.92</td><td>4.17</td></tr><tr><th></th><td></td><td>SD</td><td>0.41</td><td>0.04</td><td>0.02</td><td>0.02</td><td>0.09</td><td>0.08</td><td>0.1</td><td>0.11</td><td>0.47</td><td>0.09</td><td>0.03</td><td>0.02</td><td>0.14</td></tr><tr><th></th><td></td><td>Minimum</td><td>9.6</td><td>1.88</td><td>0.33</td><td>1.1</td><td>0.83</td><td>2.22</td><td>1.32</td><td>3.2</td><td>5.65</td><td>0.51</td><td>0.62</td><td>0.89</td><td>4.05</td></tr><tr><th></th><td></td><td>Maximum</td><td>10.65</td><td>1.97</td><td>0.37</td><td>1.16</td><td>1.05</td><td>2.4</td><td>1.56</td><td>3.49</td><td>6.8</td><td>0.71</td><td>0.67</td><td>0.93</td><td>4.41</td></tr><tr><th><i>P. nigroalbus</i></th><td>♀</td><td>00040566</td><td>9.74</td><td>1.88</td><td>0.29</td><td>1</td><td>1.03</td><td>2.24</td><td>1.17</td><td>2.95</td><td>6.01</td><td>0.41</td><td>0.66</td><td>0.94</td><td>3.66</td></tr><tr><th><i>P. notata</i></th><td>♂</td><td>Mean (5)</td><td>9.94</td><td>1.81</td><td>0.32</td><td>1.02</td><td>1.24</td><td>3.17</td><td>1.25</td><td>3.14</td><td>6.08</td><td>0.45</td><td>0.63</td><td>0.91</td><td>3.61</td></tr><tr><th></th><td></td><td>SD</td><td>0.3</td><td>0.12</td><td>0.02</td><td>0.04</td><td>0.09</td><td>0.26</td><td>0.09</td><td>0.08</td><td>0.2</td><td>0.04</td><td>0.04</td><td>0.06</td><td>0.24</td></tr><tr><th></th><td></td><td>Minimum</td><td>9.44</td><td>1.7</td><td>0.29</td><td>0.97</td><td>1.12</td><td>2.89</td><td>1.17</td><td>3.06</td><td>5.75</td><td>0.41</td><td>0.57</td><td>0.84</td><td>3.34</td></tr><tr><th></th><td></td><td>Maximum</td><td>10.22</td><td>1.99</td><td>0.34</td><td>1.08</td><td>1.35</td><td>3.51</td><td>1.4</td><td>3.26</td><td>6.3</td><td>0.51</td><td>0.66</td><td>1.01</td><td>3.87</td></tr><tr><th></th><td>♀</td><td>Mean (5)</td><td>9.94</td><td>1.8</td><td>0.32</td><td>1.05</td><td>0.96</td><td>2.45</td><td>1.31</td><td>3.17</td><td>6.28</td><td>0.46</td><td>0.66</td><td>0.93</td><td>3.73</td></tr><tr><th></th><td></td><td>SD</td><td>0.31</td><td>0.15</td><td>0.03</td><td>0.04</td><td>0.1</td><td>0.09</td><td>0.18</td><td>0.15</td><td>0.25</td><td>0.04</td><td>0.04</td><td>0.04</td><td>0.23</td></tr><tr><th></th><td></td><td>Minimum</td><td>9.54</td><td>1.62</td><td>0.3</td><td>1.01</td><td>0.84</td><td>2.35</td><td>1.06</td><td>3</td><td>5.93</td><td>0.42</td><td>0.62</td><td>0.88</td><td>3.38</td></tr><tr><th></th><td></td><td>Maximum</td><td>10.3</td><td>1.99</td><td>0.37</td><td>1.1</td><td>1.12</td><td>2.57</td><td>1.51</td><td>3.33</td><td>6.51</td><td>0.51</td><td>0.73</td><td>0.98</td><td>3.94</td></tr><tr><th><i>P.ractepilosa</i> sp. nov.</th><td>♂</td><td>Mean (2)</td><td>8.93</td><td>1.86</td><td>0.37</td><td>0.86</td><td>0.9</td><td>2.13</td><td>1</td><td>2.74</td><td>5.51</td><td>0.47</td><td>0.5</td><td>0.85</td><td>3.39</td></tr><tr><th></th><td></td><td>SD</td><td>0.49</td><td>0.15</td><td>0.03</td><td>0</td><td>0.17</td><td>0.12</td><td>0.3</td><td>0.14</td><td>0.6</td><td>0.05</td><td>0.14</td><td>0.07</td><td>0.25</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.59</td><td>1.75</td><td>0.34</td><td>0.86</td><td>0.77</td><td>2.04</td><td>0.79</td><td>2.64</td><td>5.09</td><td>0.44</td><td>0.4</td><td>0.8</td><td>3.21</td></tr><tr><th></th><td></td><td>Maximum</td><td>9.27</td><td>1.96</td><td>0.39</td><td>0.86</td><td>1.02</td><td>2.21</td><td>1.21</td><td>2.83</td><td>5.93</td><td>0.5</td><td>0.6</td><td>0.9</td><td>3.57</td></tr><tr><th></th><td>♀</td><td>Mean (5)</td><td>9.19</td><td>1.99</td><td>0.37</td><td>0.93</td><td>0.9</td><td>2.23</td><td>1.1</td><td>2.99</td><td>5.47</td><td>0.51</td><td>0.55</td><td>0.84</td><td>3.86</td></tr><tr><th></th><td></td><td>SD</td><td>0.67</td><td>0.1</td><td>0.02</td><td>0.03</td><td>0.06</td><td>0.13</td><td>0.12</td><td>0.21</td><td>0.47</td><td>0.04</td><td>0.07</td><td>0.01</td><td>0.26</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.32</td><td>1.83</td><td>0.34</td><td>0.89</td><td>0.82</td><td>2.02</td><td>0.97</td><td>2.66</td><td>4.89</td><td>0.44</td><td>0.43</td><td>0.81</td><td>3.44</td></tr><tr><th></th><td></td><td>Maximum</td><td>10.19</td><td>2.08</td><td>0.4</td><td>0.97</td><td>0.97</td><td>2.37</td><td>1.27</td><td>3.22</td><td>6.2</td><td>0.56</td><td>0.6</td><td>0.85</td><td>4.1</td></tr><tr><th><i>P. tricolor</i> sp. nov.</th><td>♂</td><td>Mean (2)</td><td>8.66</td><td>1.58</td><td>0.29</td><td>0.91</td><td>0.99</td><td>2.47</td><td>1.17</td><td>2.65</td><td>5.3</td><td>0.42</td><td>0.54</td><td>0.84</td><td>2.92</td></tr><tr><th></th><td></td><td>SD</td><td>0.16</td><td>0.04</td><td>0.01</td><td>0.05</td><td>0.09</td><td>0.07</td><td>0.01</td><td>0.05</td><td>0.05</td><td>0</td><td>0.03</td><td>0.02</td><td>0.17</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.55</td><td>1.56</td><td>0.29</td><td>0.88</td><td>0.93</td><td>2.42</td><td>1.16</td><td>2.61</td><td>5.26</td><td>0.42</td><td>0.51</td><td>0.82</td><td>2.8</td></tr><tr><th></th><td></td><td>Maximum</td><td>8.77</td><td>1.61</td><td>0.3</td><td>0.95</td><td>1.05</td><td>2.52</td><td>1.17</td><td>2.68</td><td>5.33</td><td>0.42</td><td>0.56</td><td>0.86</td><td>3.04</td></tr><tr><th></th><td>♀</td><td>Mean (3)</td><td>9.33</td><td>1.7</td><td>0.31</td><td>0.92</td><td>0.9</td><td>2.17</td><td>1.13</td><td>2.77</td><td>5.6</td><td>0.39</td><td>0.6</td><td>0.85</td><td>3.2</td></tr><tr><th></th><td></td><td>SD</td><td>0.74</td><td>0.03</td><td>0.02</td><td>0.01</td><td>0.02</td><td>0.09</td><td>0.13</td><td>0.1</td><td>0.23</td><td>0.04</td><td>0.02</td><td>0.04</td><td>0.19</td></tr><tr><th></th><td></td><td>Minimum</td><td>8.7</td><td>1.67</td><td>0.29</td><td>0.91</td><td>0.88</td><td>2.07</td><td>1.02</td><td>2.66</td><td>5.44</td><td>0.35</td><td>0.58</td><td>0.8</td><td>2.98</td></tr><tr><th></th><td></td><td>Maximum</td><td>10.15</td><td>1.73</td><td>0.32</td><td>0.93</td><td>0.92</td><td>2.25</td><td>1.28</td><td>2.86</td><td>5.76</td><td>0.42</td><td>0.61</td><td>0.87</td><td>3.34</td></tr></tbody></table>
Data from: DNA barcoding meets molecular scatology: short mtDNA sequences for standardized species assignment of carnivore noninvasive samples
Although species assignment of scats is important to study carnivoran biology, there is still no standardized assay for the identification of carnivores worldwide, which would allow large-scale routine assessments and reliable cross-comparison of results. Here we evaluate the potential of two short mtDNA fragments (ATP6 [126 bp] and COI [187 bp]) to serve as standard markers for the Carnivora. Samples of 66 species were sequenced for one or both of these segments. Alignments were complemented with archival sequences, and analyzed with three approaches (tree-based, distance-based and character-based). Intraspecific genetic distances were generally lower than between-species distances, resulting in diagnosable clusters for 86% (ATP6) and and 85% (COI) of the species. Notable exceptions were recently diverged species, most of which could still be identified using diagnostic characters, uniqueness of haplotypes, or by reducing the geographic scope of the comparison. In silico comparative analyses were also performed with a 110-bp cytochrome b (cytb) segment, whose identification success was lower (70%), possibly due to the smaller number of informative sites and/or the influence of misidentified sequences obtained from GenBank. Finally, we performed case-studies with faecal samples, which supported the suitability of our two focal markers for poor-quality DNA, and allowed an assessment of prey-DNA co-amplification. No evidence of prey DNA contamination was found for ATP6, while some cases were observed for COI and subsequently eliminated by the design of more specific primers. Overall, our results indicate that these segments hold good potential as standard markers for accurate species-level identification in the Carnivora.
ECCO v4 standard analysis sample (v4r1)
<p>Generated from the ECCO output (version 4, release 1) available to download from <a href="https://ecco-group.org/products.htm">ecco-group.org</a> using a Julia workflow available from <a href="https://github.com/gaelforget/OceanStateEstimation.jl">OceanStateEstimation.jl</a> (see <a href="https://gaelforget.github.io/OceanStateEstimation.jl/dev/">the docs</a>).</p>
Table ¹: Summary statistics for mandible measurements (in mm) of each age group of Choloepus (mean ± standard deviation [range] sample size). in Harpy eagle kill sample provides insights into the mandibular ontogenetic patterns of two-toed sloths (Xenarthra: Choloepus)
<p><b>Table ¹:</b> Summary statistics for mandible measurements (in mm) of each age group of <i>Choloepus</i> (mean ± standard deviation [range] sample size).</p><table><tbody><tr><th><b>Measurement</b></th><th><b>Age classes</b></th></tr></tbody><tbody><tr><th></th><td><b>Infant</b></td><td><b>Įuvenile</b></td><td><b>Subadult</b></td><td><b>Adult</b></td></tr><tr><th>BAC</th><td>44.08 ± 3.04 [40.7–47.92] 4</td><td>48.54 ± 2.65 [42.39–52.29] 15</td><td>54.46 ± 3.79 [50.78–59.2] 4</td><td>65.12 ± 3.28 [61.05–71.01] 9</td></tr><tr><th>BCC</th><td>20.57 ± 1.47 [18.76–22.35] 4</td><td>23.08 ± 1.33 [20.83–25.78] 16</td><td>26.51 ± 0.73 [25.53–27.25] 4</td><td>31.81 ± 1.59 [28.84–33.69] 9</td></tr><tr><th>HCA</th><td>12.84 ± 1.41 [9.66–15.12] 13</td><td>15.66 ± 1.74 [11.95–20.11] 18</td><td>17.48 ± 1.13 [16.32–18.88] 4</td><td>21 ± 1.25 [18.49–23.08] 9</td></tr><tr><th>HCC</th><td>8.16 ± 1.4 [6.01–10.29] 13</td><td>9.65 ± 1.23 [7.52–11.68] 15</td><td>13.08 ± 0.72 [12.11–13.83] 4</td><td>23.68 ± 0.98 [22.16–25.02] 9</td></tr><tr><th>LAM</th><td>17.74 ± 1.57 [14.58–20.44] 13</td><td>20.6 ± 1.15 [19.15–22.72] 18</td><td>24.11 ± 2.11 [21.29–26.3] 4</td><td>26.28 ± 1.67 [23.31–28.9] 9</td></tr><tr><th>LCD</th><td>8.69 ± 1.11 [7.48–11.43] 13</td><td>9.88 ± 0.75 [8.89–11.73] 18</td><td>11.43 ± 0.8 [10.7–12.54] 4</td><td>12 ± 1.07 [10.18–13.89] 9</td></tr><tr><th>LMS</th><td>14.78 ± 0.84 [13.52–16.22] 13</td><td>16.98 ± 0.54 [16–18.11] 18</td><td>18.74 ± 0.69 [17.72–19.15] 4</td><td>20.06 ± 0.71 [19.15–21.38] 9</td></tr><tr><th>TML</th><td>56.3 ± 3.76 [50.53–61.07] 13</td><td>64.9 ± 1.99 [62.81–68.57] 18</td><td>72.42 ± 2.12 [69.41–74.39] 4</td><td>86.67 ± 3.52 [81.7–91.93] 9</td></tr></tbody></table><p>See main text for measurement abbreviations.</p>
Randomized Comparison of Vaginal Self Sampling for Human Papillomavirus (HPV) Testing by Standard Versus Dry Vaginal Swabs
ClinicalTrials.gov study NCT01316120. IPD Sharing: Not stated. Countries: 0. Publications: 1.
Data from: DNA barcoding meets molecular scatology: short mtDNA sequences for standardized species assignment of carnivore noninvasive samples
Open the record for dataset details and reuse information.
Comprehensive analysis of RNA-seq kits for standard, low and ultra-low quantity samples
GEO Series GSE124198. Homo sapiens. 80 samples. Type: Expression profiling by high throughput sequencing.
No detectable alloreactive transcriptional responses under standard sample preparation conditions during donor-multiplexed single-cell RNA sequencing of peripheral blood mononuclear cells
GEO Series GSE161329. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Standard and targeted single-cell transcriptomics of CD8+ T cell samples and targeted single-cell transcriptomics of B cell samples for systematic analysis
GEO Series GSE223704. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Gold standard taxonomic profile of the CAMI 2 Mouse Gut Toy data set, samples 0-63
<p><strong>DataURL: </strong> https://data.cami-challenge.org/participate</p>
A Study of the PedSCath Pediatric Sampling Catheter Versus Current Standard of Care.
ClinicalTrials.gov study NCT04763967. IPD Sharing: Not stated. Countries: 1. Publications: 0.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.