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57 results for “Schistosoma japonicum”
Comparative analysis of microRNA expression profiles of adult Schistosoma japonicum isolated from water buffalo and yellow cattle
GEO Series GSE124351. Schistosoma japonicum. 8 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Differential Expression of Chemokine and Matrix Re-Modelling Genes Explains Contrasting Schistosoma japonicum-induced Hepatopathology in Murine Models
GEO Series GSE25713. Mus musculus. 24 samples. Type: Expression profiling by array.
Analysis of gene expression among schistosoma japonicum from different hosts
GEO Series GSE24615. Schistosoma japonicum. 9 samples. Type: Expression profiling by array.
MicroRNAs are involved in the regulation of ovary development in the pathogenic blood fluke Schistosoma japonicum
GEO Series GSE74654. Schistosoma japonicum. 8 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Developmental gene expression profiles of the human pathogen Schistosoma japonicum
GEO Series GSE12704. Schistosoma mansoni; Schistosoma japonicum. 45 samples. Type: Expression profiling by array.
HITS–CLIP reveals Argonaute 1-associated MicroRNAs and Target Sites in Schistosoma japonicum
GEO Series GSE63145. Schistosoma japonicum. 1 samples. Type: Other.
Transcriptome bioinformatical analysis of vertebrate stages of Schistosoma japonicum reveals alternative splicing events
GEO Series GSE71722. Schistosoma japonicum. 1 samples. Type: Expression profiling by high throughput sequencing.
Towards an understanding of the mechanism of hypoevolution of Schistosoma japonicum schistosomula from Microtus fortis
GEO Series GSE25728. Schistosoma japonicum. 4 samples. Type: Expression profiling by array.
Gene expression in the Schistosoma japonicum infected spleen
GEO Series GSE19525. Mus musculus. 8 samples. Type: Expression profiling by array.
Comparative analysis of transcriptional profiles of Schistosoma japonicum from SCID mouse and BALB/c mouse
GEO Series GSE122317. Schistosoma japonicum. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional Responses of Schistosoma japonicum Exposed in vivo to Sub-Lethal Dosages of Praziquantel
GEO Series GSE41149. Schistosoma japonicum. 20 samples. Type: Expression profiling by array.
Data from: Whole genome amplification and reduced-representation genome sequencing of Schistosoma japonicum miracidia
Background: In areas where schistosomiasis control programs have been implemented, morbidity and prevalence have been greatly reduced. However, to sustain these reductions and move towards interruption of transmission, new tools for disease surveillance are needed. Genomic methods have the potential to help trace the sources of new infections, and allow us to monitor drug resistance. Large-scale genotyping efforts for schistosome species have been hindered by cost, limited numbers of established target loci, and the small amount of DNA obtained from miracidia, the life stage most readily acquired from humans. Here, we present a method using next generation sequencing to provide high-resolution genomic data from S. japonicum for population-based studies. Methodology/Principal Findings: We applied whole genome amplification followed by double digest restriction site associated DNA sequencing (ddRADseq) to individual S. japonicum miracidia preserved on Whatman FTA cards. We found that we could effectively and consistently survey hundreds of thousands of variants from 10,000 to 30,000 loci from archived miracidia as old as six years. An analysis of variation from eight miracidia obtained from three hosts in two villages in Sichuan showed clear population structuring by village and host even within this limited sample. Conclusions/Significance: This high-resolution sequencing approach yields three orders of magnitude more information than microsatellite genotyping methods that have been employed over the last decade, creating the potential to answer detailed questions about the sources of human infections and to monitor drug resistance. Costs per sample range from $50-$200, depending on the amount of sequence information desired, and we expect these costs can be reduced further given continued reductions in sequencing costs, improvement of protocols, and parallelization. This approach provides new promise for using modern genome-scale sampling to S. japonicum surveillance, and could be applied to other schistosome species and other parasitic helminthes
Validation of POC-CCA Rapid Urine Test for Qualitative Detection of Schistosoma Japonicum
ClinicalTrials.gov study NCT03870204. IPD Sharing: NO. Countries: 1. Publications: 0.
The differential expressed mRNAs in spleen B cells between control(normal)，PBS treated or SJMHE1(Schistosoma japonicum-derived peptide) treated OVA-induced allergic rhinitis mice.
GEO Series GSE229347. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Study on differences in the pathology, T cell subsets and gene expression in susceptible and non-susceptible hosts infected with Schistosoma japonicum
GEO Series GSE21703. Rattus norvegicus; Mus musculus; Alexandromys fortis. 6 samples. Type: Expression profiling by array.
Data from: Whole genome amplification and reduced-representation genome sequencing of Schistosoma japonicum miracidia
Open the record for dataset details and reuse information.
Comparative genomic hybridization of Schistosoma japonicum Chinese and Philippine isolates
GEO Series GSE39329. Schistosoma japonicum. 8 samples. Type: Genome variation profiling by array.
Genome-wide transcriptome analysis revealed extensive alternative RNA splicing in gene expression in the zoonotic parasite Schistosoma japonicum
GEO Series GSE58564. Schistosoma japonicum. 2 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profiles of Schistosoma japonicum in four developmental stages
GEO Series GSE57143. Schistosoma japonicum. 23 samples. Type: Expression profiling by array.
MicroRNA-gene expression network in murine liver during Schistosoma japonicum infection
GEO Series GSE45985. Mus musculus. 4 samples. Type: Expression profiling by array; Non-coding RNA profiling by array.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.