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51
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ShareScore release 0.9.0
Dataset results
51 results for “TAD boundaries”
Pervasive RNA Binding Protein Enrichment on TAD Boundaries Regulates TAD Organization [ChIP-seq]
GEO Series GSE243420. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus [HiC_MEF]
GEO Series GSE104367. Mus musculus. 37 samples. Type: Other.
Characterisation of the mouse alpha-globin sub-TAD 3' boundary in erythroid cells [ATAC-seq]
GEO Series GSE153207. Mus musculus. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination [ChIP-Seq]
GEO Series GSE198176. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus
GEO Series GSE98632. Mus musculus. 68 samples. Type: Other; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
The essential role of CTCF binding site at TAD boundaries in modulating Ifng locus chromatin interactions and transcriptional regulation [Hi-C]
GEO Series GSE300741. Mus musculus. 3 samples. Type: Other.
A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination
GEO Series GSE198182. Mus musculus. 69 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Prmt5-dependent regulation of gene expression and TAD boundary strength during early adipogenesis
GEO Series GSE208298. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac
GEO Series GSE245529. Solanum lycopersicum. 51 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.
A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination [Micro-C]
GEO Series GSE198181. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac [ChIP-seq]
GEO Series GSE245525. Solanum lycopersicum. 28 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The essential role of CTCF binding site at TAD boundaries in modulating Ifng locus chromatin interactions and transcriptional regulation [ChIP-seq]
GEO Series GSE300739. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Pervasive RNA Binding Protein Enrichment on TAD Boundaries Regulates TAD Organization [RNA-seq]
GEO Series GSE277220. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Characterisation of the mouse alpha-globin sub-TAD 3' boundary in erythroid cells [ChIP-seq]
GEO Series GSE153206. Mus musculus. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A TAD boundary at the HoxD locus segregates opposing limb regulatory landscapes and their target genes [ChIP-Seq]
GEO Series GSE101714. Mus musculus. 13 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Characterisation of the mouse alpha-globin sub-TAD 3' boundary in erythroid cells [NG Capture-C]
GEO Series GSE153208. Mus musculus. 18 samples. Type: Other.
Characterisation of the mouse alpha-globin sub-TAD 3' boundary in erythroid cells [RNA-seq]
GEO Series GSE153205. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
A de novo transcription-dependent TAD boundary underpins critical multiway interactions during antibody class switch recombination [PRO-seq]
GEO Series GSE198180. Mus musculus. 4 samples. Type: Other.
Pervasive RNA Binding Protein Enrichment on TAD Boundaries Regulates TAD Organization
GEO Series GSE243534. Homo sapiens; Mus musculus. 23 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.
Induction of a chromatin boundary in vivo upon insertion of a TAD border (TLA)
GEO Series GSE166581. Mus musculus. 2 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.