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Figure 2 in Diversity of cellulolytic and xylanolytic fungi associated with the digestive tract of aquatic insect larvae in streams of the Amazon Forest and Cerrado in Brazil
Figure 2. Principal component analysis (PCA) of the physicochemical parameters of the streams sampled in the Amazon Forest - Amazonas (A) and Cerrado - Tocantins (T) in the north of Brazil.
Figure 1 in Diversity of cellulolytic and xylanolytic fungi associated with the digestive tract of aquatic insect larvae in streams of the Amazon Forest and Cerrado in Brazil
Figure 1. Map of the sampling sites of Stenochironomus (Diptera:Chironomidae) in low-order streams in the Adolpho Ducke Forest Reserve in the state of Amazonas (Amazon Forest Biome) and at the Lajeado State Park (LSP) in the state of Tocantins, (Cerrado Biome) Brazil.
Figure 2 in Diversity and enzymatic capabilities of fungi associated with the digestive tract of larval stages of a shredder insect in Cerrado and Amazon Forest, Brazil
Figure 2. Percentage of fungal isolates from the DT of Triplectides (Trichoptera: Leptoceridae) in Cerrado (A) and Amazon Forest (B) biomes producers and non-producers of xylanase (Xyl) and cellulase (CMCase).
Fig. 2 in A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea
Fig. 2. Phylogenetic tree based on 16S rRNA gene sequence comparisons, showing the relationship between the isolated strains in this study and the notable species from phylum Firmicutes (a) order Lactobacillales (In particular Enterococcus, Lactobacillus and Vagococcus), phylum Actinobacteria (c) and phylum Proteobacteria (d) and. The trees were mainly reconstructed using the neighbor-joining algorithm (NJ), Maximum parsimony (MP) and maximum likelihood (ML) algorithms were applied for additional comparison. Filled diamonds indicate branches present in the phylogenetic trees generated using the three different methods. Numbers on the nodes (>70%) represent bootstrap values as percentages of 1000 replicates (NJ/MP/ML). Clostridium butyricum DSM 10702T (AQQF01000149), Bifidobacterium bifidum ATCC 29521T (KE993182) and Spirochaeta aurantia subsp. aurantia DSM 1902T (FR749896) were used as outgroups, respectively. Bar, 0.02 (a, c, d) and 0.01 (b) accumulated changes per nucleotide.
Fig. 1 in A report of 12 unrecorded prokaryotic species isolated from gastrointestinal tracts and feces of various endangered animals in Korea
Fig. 1. Transmission electron micrographs of the isolated strains. Strain-1, AE4-1; strain-2, B3; strain-3, M3; strain-4, VM3408; strain-5, VT2418; strain-6, VM2501; strain-7, VT2414; strain-8, VT2504.
Рис. 4. Карта-схема мест встреч пятнистого оΛеня в Нижнем Приамурье в 1979–2021 гг. КваΑраты — места фоторегистрации: 1 — верховья рр. Обор и Àурмин; 2, 3 — Анюйский национаΛьный парк; круги — места встреч по Λитературным и опросным Αанным: 1 — окрестности с. Кутузовка (место первой регистрации в 1979 г.); 2 — верховья р. СиΑима; 3 — устье р. Нижняя Буге; 4 — бассейн р. Мухен; 5–8 — Анюйский национаΛьный парк (соответственно, р. Пихца, урочище Сира, окрестности с. Арсеньево, устье р. СоΛоми); 9 — среΑнее течение р. СоΛоми; 10 — 76 км трассы ΔиΑога — Ванино; 11 — бассейн р. Кия; 12 — бассейн р. ХойΑур; 13 — бассейн р. Нюра Fig. 4. A schematic map of sika deer sightings in the Lower Amur Region in 1979-2021. Squares designate sites of photo recording: 1 — upper reaches of the rivers Obor and Durmin; 2, 3 — Anyui National Park; circles designate sightings sites according to the literature and the survey data: 1 — vicinity of the village Kutuzovka (the place of the first registration in 1979); 2 — upper reaches of the river Sidima; 3 — the mouth of the river Lower Buge; 4 — the Mukhen River basin; 5-8 —Anyui National Park (respectively, the Pikhtsa River, the Sira tract, the vicinity of the village Arsenyevo, the mouth of the Solomi River); 9 — the middle course of the Solomi River; 10 — 76 km of the Lidoga-Vanino Highway; 11 — the Kiya River basin; 12 — the Khoydur River basin; 13 — the Nyura River basin in New data on the distribution of sika deer Cervus nippon Temminck, 1838 in the Lower Amur Region
Рис. 4. Карта-схема мест встреч пятнистого оΛеня в Нижнем Приамурье в 1979–2021 гг. КваΑраты — места фоторегистрации: 1 — верховья рр. Обор и Àурмин; 2, 3 — Анюйский национаΛьный парк; круги — места встреч по Λитературным и опросным Αанным: 1 — окрестности с. Кутузовка (место первой регистрации в 1979 г.); 2 — верховья р. СиΑима; 3 — устье р. Нижняя Буге; 4 — бассейн р. Мухен; 5–8 — Анюйский национаΛьный парк (соответственно, р. Пихца, урочище Сира, окрестности с. Арсеньево, устье р. СоΛоми); 9 — среΑнее течение р. СоΛоми; 10 — 76 км трассы ΔиΑога — Ванино; 11 — бассейн р. Кия; 12 — бассейн р. ХойΑур; 13 — бассейн р. Нюра Fig. 4. A schematic map of sika deer sightings in the Lower Amur Region in 1979-2021. Squares designate sites of photo recording: 1 — upper reaches of the rivers Obor and Durmin; 2, 3 — Anyui National Park; circles designate sightings sites according to the literature and the survey data: 1 — vicinity of the village Kutuzovka (the place of the first registration in 1979); 2 — upper reaches of the river Sidima; 3 — the mouth of the river Lower Buge; 4 — the Mukhen River basin; 5-8 —Anyui National Park (respectively, the Pikhtsa River, the Sira tract, the vicinity of the village Arsenyevo, the mouth of the Solomi River); 9 — the middle course of the Solomi River; 10 — 76 km of the Lidoga-Vanino Highway; 11 — the Kiya River basin; 12 — the Khoydur River basin; 13 — the Nyura River basin
Fig. 3 in A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)
Fig. 3. Phylogenetic tree based on 16S rRNA gene sequence comparisons, showing the relationship between the seven strains belonging to the phylum Firmicutes isolated in this study and the notable type species from each genus. The tree was reconstructed using neighbor joining (NJ), maximum likelihood (ML), and maximum parsimony (MP) algorithms. Filled diamonds indicate corresponding branches present in the phylogenetic tree generated using the three different tree construction methods. Numbers at the nodes represent bootstrap values of more than 70% are shown, based on 1000 replicates (NJ/MP/ML). Limnochorda pilosa HC45T (AP014924) was used as the outgroup. The bar indicates 0.02 accumulated substitutions per nucleotide.
Fig. 4 in A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)
Fig. 4. Phylogenetic tree based on 16S rRNA gene sequence comparisons, showing the relationship between the two strains belonging to the phylum Proteobacteria isolated in this study and the notable type species from each family. The tree was reconstructed using neighbor joining (NJ), maximum likelihood (ML), and maximum parsimony (MP) algorithms. Filled diamonds indicate corresponding branches present in the phylogenetic tree generated using the three different tree construction methods. Numbers at the nodes represent bootstrap values of more than 70% are shown, based on 1000 replicates (NJ/MP/ML). Bacteroides fragilis NCTC 9343T (NR_074784.2) was used as the outgroup. The bar indicates 0.05 accumulated substitutions per nucleotide.
Fig. 2 in A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)
Fig. 2. Phylogenetic tree based on 16S rRNA gene sequence comparisons, showing the relationship between the eight strains belonging to the phylum Actinobacteria isolated in this study and the notable type species from each genus. The tree was reconstructed using neighbor joining (NJ), maximum likelihood (ML), and maximum parsimony (MP) algorithms. Filled diamonds indicate corresponding branches present in the phylogenetic tree generated using the three different tree construction methods. Numbers at the nodes represent bootstrap values of more than 70% are shown, based on 1000 replicates (NJ/MP/ML). Akkermansia muciniphila ATCC BAA-835T (NR_074436.1) was used as the outgroup. The bar indicates 0.02 accumulated substitutions per nucleotide.
Fig. 1 in A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)
Fig. 1. Transmission electron micrographs of the strains isolated in this study. The arrows indicate flagella. Strains: 1, H11M7; 2, H11M9; 3, H23M10; 4, H21T1; 5, H13T1; 6, H43T7; 7, H21T20; 8, H23M25; 9, H23M9; 10, S13R1; 11, H13R26; 12, H11M5; 13, H11M15; 14, H11R12; 15, H21T7; 16, H11R21; 17, M13M1; 18, H23T21.
Fig. 5 in A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)
Fig. 5. Phylogenetic tree based on 16S rRNA gene sequence comparisons, showing the relationship between strain H23T21 and the notable type species from the family Sphingobacteriaceae. The tree was reconstructed using neighbor joining (NJ), maximum likelihood (ML), and maximum parsimony (MP) algorithms. Filled diamonds indicate corresponding branches present in the phylogenetic tree generated using the three different tree construction methods. Numbers at the nodes represent bootstrap values of more than 70% are shown, based on 1000 replicates (NJ/MP/ML). Filobacterium rodentium SMR-CT (LC055729) was used as the outgroup. The bar indicates 0.05 accumulated substitutions per nucleotide.
Datasets for 'Reducing variability in along-tract analysis with diffusion profile realignment'
<p>Datasets we used in the manuscript 'Reducing variability in along-tract analysis with diffusion profile realignment'.</p> <p>Additional code available at https://github.com/samuelstjean/dpr</p>
Figure 6 in A new species of Thraulodes Ulmer (Ephemeroptera: Leptophlebiidae), with additional data on the anatomy of the reproductive tract
Figure 6 Female reproductive tract of the Thraulodes latinus sp. nov. A- Reproductive tract of an adult female showing the ovarian follicles (of) full of eggs and the lateral oviduct (lo). In (B) detail of the lateral oviduct (la) and common oviduct (co). The arrows indicate the eggs in the ovarian follicles and in the lateral oviduct.C- Rectangular oocytes (arrow) in mature females. Bars: A = 400 µm and B-C = 160 µm.
Figure 5 in A new species of Thraulodes Ulmer (Ephemeroptera: Leptophlebiidae), with additional data on the anatomy of the reproductive tract
Figure 5 Male reproductive tract of the Thraulodes latinus sp. nov. A- Mature nymph showed the testes (T) and deferent ducts (dd) still empty. Subimago (B) and adults (C-D) showed the degenerate testes (T), deferent ducts (dd) full of spermatozoa, penises (p) and forceps (f). Bars: A = 0.7 mm and B-D = 0.5 mm.
Figure 2 in A new species of Thraulodes Ulmer (Ephemeroptera: Leptophlebiidae), with additional data on the anatomy of the reproductive tract
Figure 2 Thraulodes latinus sp. nov., male imago. A- Fore wing; B- Hind wing; C- Styliger plate, ventral view; D-E- Detail penes, dorsal view (D) and ventral view (E). Bars: A-B = 1 mm; C = 0.04 mm; D-E = 0.02 mm.
Figure 1 in A new species of Thraulodes Ulmer (Ephemeroptera: Leptophlebiidae), with additional data on the anatomy of the reproductive tract
Figure 1 Thraulodes latinus sp. nov., male imago. A- Lateral view; B- Dorsal view; C-E- Detail of fore leg (C), middle leg (D) and hind leg (E); F-G- General aspect of genitalia in dorsal view (F) and lateral view (G).
Figure 3 in A new species of Thraulodes Ulmer (Ephemeroptera: Leptophlebiidae), with additional data on the anatomy of the reproductive tract
Figure 3 Thraulodes latinus sp. nov., female imago. A- Lateral view; B-C- Abdomen, in dorsal view (B) and ventral view (C).
Figure 2 in Morphology of the male reproductive tract in the water scavenger beetle Tropisternus collaris Fabricius, 1775 (Coleoptera: Hydrophilidae)
Figure 2 Histology of the male reproductive tract of T. collaris. (A) Longitudinal section of a testis showing the follicles (f); growth (a), maturation (b), and differentiation (c) zones; and vas efferens (ve) opening (arrow) into a vas deferens (vd) with lumen full of spermatozoa (asterisk). (B) Longitudinal section showing detail of the vasa efferentia (ve) in the confluence zone (black arrow) with the vas deferens (vd). The white arrow points to sperm bundles in the vas efferens. The asterisk indicates the lumen of a vas deferens with dissociated bundles. The arrowhead points to the epithelial of the vas deferens. (C and D) Details of the stages of spermatogenesis, showing zones of cell growth (a), maturation (b), and differentiation (c). The arrow points to a sperm bundle. Bars: A and B = 600 µm, C and D = 200 µm.
Figure. The phylogenetic tree showing the relationship among Brevibacillus parabrevis strains SA2.2 and TJ2.3, Bacillus licheniformis MG4.2, and their phylogenetically closest type strains. The GenBank accession numbers of the type strains and studied strains are shown following species names. Distance matrix was calculated by Kimura's 2-parameter model. The scale bar indicates 0.02 substitutions per nucleotide position. Alicyclobacillus pohliae AJ564766 served as an out-group. in Distribution of extracellular enzyme-producing bacteria in the digestive tracts of 4 brackish water fish species
Figure. The phylogenetic tree showing the relationship among Brevibacillus parabrevis strains SA2.2 and TJ2.3, Bacillus licheniformis MG4.2, and their phylogenetically closest type strains. The GenBank accession numbers of the type strains and studied strains are shown following species names. Distance matrix was calculated by Kimura's 2-parameter model. The scale bar indicates 0.02 substitutions per nucleotide position. Alicyclobacillus pohliae AJ564766 served as an out-group.
Figure 3 in Seasonal hormones, female reproductive tract changes, and some field observations on breeding activities of the small Indian mongoose (Herpestes javanicus) from its native range of Potohar Plateau, Pakistan
Figure 3. Light microscopic (hematoxylin and eosin stained) sections (40×) of the ovaries of female small Indian mongoose (Herpestes javanicus) from the Potohar Plateau, Pakistan: A) showing 3 Graafian follicles indicative of the state of preovulation during February 2013; B) events of early gestation period during March 2013, corpus luteum of moderate size and reddish yellow, antrum being a bit convoluted in structure rather than being complete; C) events of late gestation period during April 2013, whereby corpora lutea are seen as the most prominent structures; D) showing lactation phase of the species with no corpora lutea or ripe follicles during June 2013. (*P.F.: primary follicle; S.F.: secondary follicle; C.L.: corpus luteum; G.F.: Graafian follicle; Pr. F.: primordial follicle).
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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