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281
datasets available to search
ShareScore release 0.9.0
Dataset results
281 results for “Whole brain”
Whole Brain Drosophila Larval Glia
<p>Example intact whole brains from female and male Drosophila larva expressing a glial marker associated with manuscript -</p> <p><strong>Intact Drosophila Whole Brain Cellular Quantitation reveals Sexual Dimorphism</strong>. Wei Jiao, Gard Spreemann, Evelyne Ruchti, Soumya Banerjee, Ying Shi, R. Steven Stowers, Kathryn Hess and Brian D. McCabe</p> <p>Brain Mind Institute, EPFL - Swiss Federal Institute of Technology Lausanne, Switzerland <a href="https://mccabelab.org">https://mccabelab.org</a></p> <p>See ReadMe file for detailed genotype and methods.</p>
NEATmap: a high-efficiency deep learning approach for whole mouse brain neuronal activity trace mapping
<p>Here are some demo datasets for validating the NEATmap pipeline for high-efficiency whole brain c-Fos<sup>+</sup> cell automated segmentation and quantitative analysis, including:</p> <ol> <li>BrainImage_group.zip.001-007: Validation of NEATmap for automated segmentation and quantitative analysis of mouse whole-brain c-Fos activity images (in Forced Swimming Test).</li> <li>Segmentation_result.zip: Figure 1a, Supplementary Videos 1 and 2 show dual-channel brain slices and segmentation results. They can be merged using Imaris to validate the segmentation results of NEATmap.</li> <li>RawImage_example.zip: High-resolution 3D images of mouse brain slices showing c-Fos<sup>+</sup> cells in Figure 1e.</li> </ol> <p>Due to the total size of the mouse whole-brain image datasets (both raw and processed) included in all the tests exceeding 10 Terabytes, uploading it to a public data repository is impractical. In this work, we provide a dataset of dual-channel (c-Fos<sup>+</sup> channel and autofluorescence channel in forced swimming test experimental group) whole-brain images of mouse for the validation of NEATmap automated segmentation method.</p>
Whole-Brain 3D MRF and MRI Multi-Scanner, Scan-Rescan Dataset at 3T
<p>This repository contains a multi-scanner, scan-rescan dataset comprising thirty (30) whole-brain 3D MRI acquisitions. Each scan acquisition (n = 30) includes whole-brain quantitative MRI maps (MRF T1, MRF T2, and ADC) and weighted MR images (T1w MPRAGE, T2w SPACE, and T2w FLAIR). Five healthy subjects (deidentified) were scanned over three scanners (all 3T field strength). Each subject was scanned twice per scanner, for a total of 30 scans (5 subjects × 3 scanners × 2 scans). All data was acquired at University Hospitals Cleveland Medical Center and Case Western Reserve University.</p> <p> </p> <p>This dataset was used in the analysis for the following research article published in Investigative Radiology: "<strong><a href="https://journals.lww.com/investigativeradiology/fulltext/9900/physics_informed_discretization_for_reproducible.159.aspx">Physics-Informed Discretization for Reproducible and Robust Radiomic Feature Extraction Using Quantitative MRI</a></strong>" and request this article be referenced in all research works that use this dataset.</p>
Stereotactic Radiation Therapy With or Without Whole-Brain Radiation Therapy in Treating Patients With Brain Metastases
ClinicalTrials.gov study NCT00377156. IPD Sharing: Not stated. Countries: 2. Publications: 2.
Tarceva With Whole Brain Radiation Therapy - Brain Mets From Non-Small Cell Lung Cancer
ClinicalTrials.gov study NCT00871923. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Memantine in Preventing Side Effects in Patients Undergoing Whole-Brain Radiation Therapy for Brain Metastases From Solid Tumors
ClinicalTrials.gov study NCT00566852. IPD Sharing: Not stated. Countries: 2. Publications: 1.
Phase I Study of Ipilimumab Combined With Whole Brain Radiation Therapy or Radiosurgery for Melanoma
ClinicalTrials.gov study NCT01703507. IPD Sharing: Not stated. Countries: 1. Publications: 60.
18F-FLT-PET Imaging of the Brain in Patients With Metastatic Breast Cancer to the Brain Treated With Whole Brain Radiation Therapy With or Without Sorafenib: Comparison With MR Imaging of the Brain
ClinicalTrials.gov study NCT01621906. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Whole Brain Radiotherapy With or Without Temozolomide at Daily Fixed-dose for Brain Metastases Treatment
ClinicalTrials.gov study NCT01015534. IPD Sharing: Not stated. Countries: 1. Publications: 4.
[18F]SF12051 for Imaging the 18-kDa Translocator Protein (TSPO) in Brain and Whole Body of Healthy Subjects
ClinicalTrials.gov study NCT05564429. IPD Sharing: YES. Countries: 1. Publications: 1.
Avoiding the Hippocampus During Whole-Brain Radiation Therapy in Treating Patients With Brain Metastases
ClinicalTrials.gov study NCT01227954. IPD Sharing: Not stated. Countries: 2. Publications: 1.
Stereotactic Radiosurgery or Whole-Brain Radiation Therapy in Treating Patients With Brain Metastases That Have Been Removed By Surgery
ClinicalTrials.gov study NCT01372774. IPD Sharing: Not stated. Countries: 1. Publications: 3.
Whole Brain Radiation Therapy With Boost to Metastatic Tumor Volume Using RapidArc
ClinicalTrials.gov study NCT01218542. IPD Sharing: NO. Countries: 1. Publications: 10.
Whole-Brain Radiation Therapy or Stereotactic Radiosurgery With or Without Lapatinib Ditosylate in Treating Patients With Brain Metastasis From HER2-Positive Breast Cancer
ClinicalTrials.gov study NCT01622868. IPD Sharing: Not stated. Countries: 3. Publications: 0.
Whole-Brain Radiation Therapy With or Without Hippocampal Avoidance in Limited Stage or Extensive Stage Small Cell Lung Cancer
ClinicalTrials.gov study NCT02635009. IPD Sharing: Not stated. Countries: 2. Publications: 2.
Memantine Hydrochloride and Whole-Brain Radiotherapy With or Without Hippocampal Avoidance in Reducing Neurocognitive Decline in Patients With Brain Metastases
ClinicalTrials.gov study NCT02360215. IPD Sharing: Not stated. Countries: 2. Publications: 1.
Data for: Whole brain in situ mapping of neuronal activation in Drosophila during social behaviors and optogenetic stimulation
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Whole-transcriptome sequencing identifies neuroinflammation, metabolism and blood-brain barrier related processes in the hippocampus of aged mice during perioperative period
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Guardian of excitability: Multifaceted role of galanin in whole brain excitability
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Data from: In vivo human whole-brain Connectom diffusion MRI dataset at 760 µm isotropic resolution (PART I)
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ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.