Find research datasets worth reusing
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27
datasets available to search
ShareScore release 0.9.0
Dataset results
27 results for “alternative phenotypes”
Developmental decoupling of alternative phenotypes: insights from the transcriptomes of horn-polyphenic beetles
GEO Series GSE23425. Onthophagus nigriventris; Onthophagus taurus. 71 samples. Type: Expression profiling by array.
An EMT-driven alternative splicing program occurs in human breast cancer and modulates cellular phenotype.
GEO Series GSE30290. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Molecular-guided therapy predictions reveal drug resistance phenotypes and treatment alternatives in malignant peripheral nerve sheath tumors
GEO Series GSE50208. Homo sapiens. 8 samples. Type: Expression profiling by array.
Genetically programmed alternative splicing of NEMO mediates an autoinflammatory disease phenotype
GEO Series GSE196243. Homo sapiens. 257 samples. Type: Expression profiling by high throughput sequencing.
Summary statistics for "Alternate approach to stroke phenotyping identifies a genetic risk locus for small vessel stroke"
<p>Summary statistics of the GWA studies presented in <a href="https://doi.org/10.1101/718221">https://doi.org/10.1101/718221</a></p> <p>These are the summary statistics of all imputed SNPs, minus those that showed big differences in allele frequency between different populations (see manuscript for details).</p> <p>Header description:</p> <p>"rs_id" = the rs-id for the variant</p> <p>"chromosome" = the chromosome of the variant</p> <p>"base_pair_location" = the location in bases, according to human reference genome hg19</p> <p>"effect_allele" = the allele that is tested for association with the phenotype</p> <p>"other_allele" = the other allele</p> <p>"effect_allele_frequency" = the allele frequency of the effect allele (not necessarily the minor allele frequency)</p> <p>"IMPUTE2_info" = the imputation quality score as computed by IMPUTE2</p> <p>"beta" = the beta-coefficient from BOLT-LMM</p> <p>"standard_error" = the standard error of beta</p> <p>"p-value" = the p-value for association from BOLT-LMM</p> <p>To convert beta and standard error to odds ratios, you need to know the fraction of cases of the respective GWAS. These can be found in the supplementary material of the manuscript. Use the following formula with the case fraction μ: log OR = β / (μ * (1 - μ)). See the manuscript for more explanation.</p>
Tunable phenotypic variability through an autoregulatory alternative sigma factor circuit
GEO Series GSE171761. Bacillus subtilis PY79. 8 samples. Type: Expression profiling by high throughput sequencing.
Genetic Basis of Alternative Polyadenylation as an Emerging Molecular Phenotype for Human Traits and Diseases
GEO Series GSE139548. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.