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ShareScore release 0.9.0
Dataset results
42 results for “associations with other animals”
Data from: Individual variation in whole-animal hypoxia tolerance is associated with cardiac hypoxia tolerance in a marine teleost
Hypoxia is a pervasive problem in coastal environments and is predicted to have enduring impacts on aquatic ecosystems. Intraspecific variation in hypoxia tolerance is well documented in fish; however, the factors underlying this variation remain unknown. Here, we investigate the role of the heart in individual hypoxia tolerance of the European sea bass (Dicentrarchus labrax). We found individual whole-animal hypoxia tolerance is a stable trait in sea bass for more than 18 months (duration of study). We next examined in vitro cardiac performance and found myocardial muscle from hypoxia-tolerant individuals generated greater force, with higher rates of contraction and relaxation, than hypoxic-sensitive individuals during hypoxic exposure. Thus, whole-animal hypoxia tolerance is associated with cardiac hypoxia tolerance. As the occurrence of aquatic hypoxia is expected to increase in marine ecosystems, our experimental data suggest that cardiac performance may influence fish survival and distribution.
Host-associated bacteria isolated from animals with chemosynthetic symbionts
<p>Phylogenetic affiliation of bacteria isolated from homogenates of gutless oligochaete worms (<em>Olavius</em> spp.) and from gill tissue of lucinid clams (<em>Loripes lucinalis</em>) and bathymodiolin mussles (<em>Bathymodiolus brooksi</em>).</p>
dataset related to article "Dysregulation of Muscle-Specific MicroRNAs as Common Pathogenic Feature Associated with Muscle Atrophy in ALS, SMA and SBMA: Evidence from Animal Models and Human Patients"
<p> CINZIA CAGNOLI 0000-0001-6863-6687, MICHELA TAIANA 0000-0001-8257-8831, MONICA NIZZARDO 0000-0001-5447-0882, STEFANIA CORTI 0000-0001-5425-969X, VIVIANA PENSATO 0000-0001-9798-2669, ANNA VENERANDO <a href="https://orcid.org/0000-0002-7489-1833">0000-0002-7489-1833</a>, CINZIA GELLERA <a href="https://orcid.org/0000-0002-3582-665X">0000-0002-3582-665X</a>, SILVIA FENU 0000-0002-5233-6580, DAVIDE PAREYSON 0000-0001-6854-765X, RICCARDO MASSON 0000-0002-9311-452X, LORENZO MAGGI 0000-0002-0932-5173, ELEONORA DALLA BELLA 0000-0001-6267-9651, GIUSEPPE LAURIA 0000-0001-9773-020X, RENATO MANTEGAZZA 0000-0002-9810-5737, PIA BERNASCONI 0000-0003-0869-2104, ANGELO POLETTI 0000-0002-8883-0468, SILVIA BONANNO 0000-0002-8823-6821, STEFANIA MARCUZZO 0000-0001-6893-6372.</p>
Bacteria isolated from bengal cat (Felis catus × Prionailurus bengalensis) anal sac secretions produce volatile compounds associated with animal signaling
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Data from: Individual variation in whole-animal hypoxia tolerance is associated with cardiac hypoxia tolerance in a marine teleost
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Data from: Adaptation to reef habitats through selection on the coral animal and its associated microbiome
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Data from: Cohabitation with farm animals rather than breeding effort increases the infection with feather-associated bacteria in the barn swallow Hirundo rustica
Feather-associated bacteria are widespread inhabitants of avian plumage. However, the determinants of the between-individual variation in plumage bacterial loads are less well understood. Infection intensities can be determined by ecological factors, such as breeding habitat, and can be actively regulated by hosts via preening. Preening, yet, is a resource intensive activity, and thus might be traded-off against reproductive investment in breeding birds. Here, we studied barn swallows Hirundo rustica to assess the bacterial cost of reproduction in relation to nesting site micro-habitats. Barn swallows prefer to breed in the company of large-sized farm animals, although the presence of mammalian livestock in barns assures a warm and humid micro-climate that favours bacterial proliferation. Thus, we experimentally manipulated brood sizes of birds breeding in barns with, or without, farm animals and measured total cultivable bacteria (TCB) and feather-degrading bacteria (FDB) from the plumage. We found that the abundance of feather-associated bacteria (i.e. both TCB and FDB) in females, but not males, breeding in barns with livestock were significantly higher than in conspecifics breeding in empty barns. Plumage bacterial loads, however, were not affected by brood size manipulations in either sex. In addition, we report a negative relationship between both TCB and FDB and hatching date in females, and several sex and seasonal differences in plumage bacterial abundances. Our study is the first to show that breeding micro-habitat (i.e. livestock co-tenancy) has consequences for the abundance of feather-associated bacteria.
Data from: Allometry of animal-microbe interactions and global census of animal-associated microbes
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Data from: Evidence from pyrosequencing indicates that natural variation in animal personality is associated with DRD4 DNA methylation
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Data from: Cohabitation with farm animals rather than breeding effort increases the infection with feather-associated bacteria in the barn swallow Hirundo rustica
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Data from: Big data analysis of genes associated with neuropsychiatric disorders in an Alzheimer's disease animal model
Alzheimer's disease is a neurodegenerative disease characterized by the impairment of cognitive function and loss of memory, affecting millions of individuals worldwide. With the dramatic increase in the prevalence of Alzheimer's disease, it is expected to impose extensive public health and economic burden. However, this burden is particularly heavy on the caregivers of Alzheimer's disease patients eliciting neuropsychiatric symptoms that include mood swings, hallucinations, and depression. Interestingly, these neuropsychiatric symptoms are shared across symptoms of bipolar disorder, schizophrenia, and major depression disorder. Despite the similarities in symptomatology, comorbidities of Alzheimer's disease and these neuropsychiatric disorders have not been studied in the Alzheimer's disease model. Here, we explore the comprehensive changes in gene expression of genes that are associated with bipolar disorder, schizophrenia, and major depression disorder through the microarray of an Alzheimer's disease animal model, the forebrain specific PSEN double knockout mouse. To analyze the genes related with these three neuropsychiatric disorders within the scope of our microarray data, we used selected 1207 of a total of 45,037 genes that satisfied our selection criteria. These genes were selected on the basis of 14 Gene Ontology terms significantly relevant with the three disorders which were identified by previous research conducted by the Psychiatric Genomics Consortium. Our study revealed that the forebrain specific deletion of Alzheimer's disease genes can significantly alter neuropsychiatric disorder associated genes. Most importantly, most of these significantly altered genes were found to be involved with schizophrenia. Taken together, we suggest that the synaptic dysfunction by mutation of Alzheimer's disease genes can lead to the manifestation of not only memory loss and impairments in cognition, but also neuropsychiatric symptoms.
Animal-associated marine acidobacteria with a rich natural product repertoire
<p>This dataset contains the data associated with the manuscript: "Animal-associated marine acidobacteria with a rich natural product repertoire". This includes:</p> <p>- the list of accessions used for the antiSMASH analyses (Accessions for antiSMASH analysis.txt).</p> <p>- the scripts and data use for the transPACT analysis (.rar files).</p> <p>- the metagenome-assembled genome (MAG) recovered from a coral (Millepora sp.) metagenome belonging to the Acanthopleuribacteraceae bacterial family (TARA_CO-0003230_METAG-metabat2_a200_c2k_e500.23.fa).</p> <p>- the NMR data for the products characterised in this work (phorbactazoles, acidobactamides and calyculinamide)</p>
Animated Video and Associated Pain and Anxiety Reduction, Following Pin Removal Post-supracondylar Fracture Fixation
ClinicalTrials.gov study NCT07234396. IPD Sharing: NO. Countries: 1. Publications: 0.
Data from: Big data analysis of genes associated with neuropsychiatric disorders in an Alzheimer's disease animal model
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Sex‐specific accelerated decay in time/activity‐dependent plasticity and associative memory in an animal model of Alzheimer's disease
GEO Series GSE186710. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Purification of TAP::ALG-1 complexes and associated RNA from mixed-stage TAP::ALG-1 transgenic (WS4303) and wild-type (N2) animals
GEO Series GSE32941. Caenorhabditis elegans. 6 samples. Type: Other.
Microarray analysis of TAP::ALG-1 associated RNAs isolated from synchronized 'wild-type' animals and 'mir-58' mutants
GEO Series GSE32942. Caenorhabditis elegans. 6 samples. Type: Other.
The emergence of the stem cell-associated Sox and POU transcription factors predates animal origins (Spec-Seq)
GEO Series GSE253886. synthetic construct. 34 samples. Type: Other.
The emergence of the stem cell-associated Sox and POU transcription factors predates animal origins
GEO Series GSE253888. synthetic construct. 38 samples. Type: Other.
The emergence of the stem cell-associated Sox and POU transcription factors predates animal origins (SELEX)
GEO Series GSE253887. synthetic construct. 4 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.