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3,178 results for “biomass”

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edi60/100

Lake Mendota, Wisconsin, USA, (Non-Dreissenid) Benthic Macroinvertebrate Abundance, Biomass, and Community Composition 2016-2018

We sampled the zoobenthos (macroinvertebrates of the benthos) of Lake Mendota from 2016-2018 to track impacts of invasive zebra mussels (Dreissena polymorpha) which were discovered in Lake Mendota in 2015 and grew exponentially to densities greater than 10,000 m-2 in shallow, rocky habitat by 2018. The data presented here exclude all zebra mussels, which are archived in a separate datset. We sampled along three transects inherited from Karatayev et al. (2013) at five different depths (1, 3, 5, 8, and 10 m) twice a summer (June and August) from 2016-2018. These data also contain some samples opportunistically taken from deeper depths along these transects that do not follow the routine sampling structure. A pared-down version of this routine sampling continued from 2019 onward but is not included here. This dataset complements zebra mussel and phytobenthos data collected according to the same routine sampling structure, for which data is also archived with EDI.

openCC (other)Dec 2022View details →
edi60/100

Lake Mendota, Wisconsin, USA, Zebra Mussel Body Size and Biomass Biometrics 2018

We sampled 98 individuals of the zebra mussel (Dreissena polymorpha) population of Lake Mendota from many littoral zone sites in 2018 to create biometric relationships between several metrics of body size and several metrics of biomass, including length, width, height, living weight, wet weight, dry weight, shell weight, shell-free dry weight, and ash-free dry weight. We selected individuals to span a wide range of body sizes and found strong relationships between most combinations of body size and biomass metrics.

openCC (other)Dec 2022View details →
edi60/100

Above-ground biomass and NDVI for Sensor Node Array, 2017 - ongoing.

Spatial and temporal variability characterizes virtually all ecosystems, with resource supply changing over the course of growing season and across years due to climate variation. To better understand spatial heterogeneity in ecological response across landscape positions, we established a 16-node sensor array within a 45-hectare catchment landscape that measures temporal variability of important biogeochemical and hydrological controls on ecosystem processes. The array was established at the Niwot Saddle catchment in order to accompany long term water quality and discharge records taken at the top and bottom of this catchment. The region forms an important ecological linkage between the terrestrial areas of the Niwot Ridge LTER and the aquatic component in the Green Lakes Valley. Over two years (2017 – 2018), above-ground biomass data were sampled adjacent to each of the 16 sensor nodes to characterize plant productivity. Beginning in 2023, Normalized Difference Vegetation Index (NDVI) was measured at each node.

openCC (other)Jan 2026View details →
edi56/100

Characterization of photosynthetic epilithic biomass on the river bed of the Upper Clark Fork River (Montana, USA) during the algal growing season of 2019

The Upper Clark Fork River (UCFR) Long Term Research in Environmental Biology (LTREB) umbrella monitoring project generating these data is conducted separately and complementarily to the 200-million-dollar (USD) superfund project for ecological restoration of the UCFR, associated tributaries, and head water streams including Silver Bow and Warm Springs Creeks. Restoration along the UCFR in western Montana includes removal of metal-laden floodplain soils, lowering of the floodplain to its original elevation, and re-vegetation of over 70 km of the river’s floodplain closest to contaminant sources. The UCFR LTREB project includes bi-weekly water quality monitoring across the first 200 km of the river and its major tributaries along a gradient of heavy metal contamination associated with historic mining. Monitoring includes inorganic phosphorus and nitrogen concentrations, biotic standing stocks, and dissolved and whole-water heavy metal concentrations. The monitoring program began in 2017 with funding likely to be extended through 2028. The original analytical intent for data in this product was to assess the response of the river algal community to the floodplain restoration. Data characterize epilithic biomass on the river bed including measurements of benthic standing stocks as organic matter and abundance of pigments associated with primary producers. Metrics of characterization include areal density of chlorophyll a, areal density of phaeophytin, the ratio of carotenoid to chlorophyll absorbance, areal density of organic matter, percent organic matter, and category of biomass composition (filamentous algae vs. other epilithon). Samples were obtained from collecting and scrubbing five rocks at any given site. Estimates of organic matter in biomass were obtained from area-corrected ash-free dry mass. Pigment concentrations were obtained through the use of extraction in acetone followed by spectroscopy. Data are from the 2019 algal growing season. Data were collected

openCC0Apr 2023View details →
edi56/100

Characterization of pigments in photosynthetic benthic biomass on the river bed of the Upper Clark Fork River (Montana, USA) during the algal growing season of 2020

The Upper Clark Fork River (UCFR) Long Term Research in Environmental Biology (LTREB) umbrella monitoring project generating these data is conducted separately and complementarily to the 200-million-dollar (USD) superfund project for ecological restoration of the UCFR, associated tributaries, and head water streams including Silver Bow and Warm Springs Creeks. Restoration along the UCFR in western Montana includes removal of metal-laden floodplain soils, lowering of the floodplain to its original elevation, and re-vegetation of over 70 km of the river’s floodplain closest to contaminant sources. The UCFR LTREB project includes bi-weekly water quality monitoring across the first 200 km of the river and its major tributaries along a gradient of heavy metal contamination associated with historic mining. Monitoring includes inorganic phosphorus and nitrogen concentrations, biotic standing stocks, and dissolved and whole-water heavy metal concentrations. The monitoring program began in 2017 with funding likely to be extended through 2028. The original analytical intent for data in this product was to assess the response of the river algal community to the floodplain restoration. Data are measurements of benthic biomass organic matter standing stocks and pigments associated with primary producers. Benthic biomass data were collected on the UCFR (USGS HUC 17010201) at seven monitoring sites distributed from Warm Springs (near Anaconda, MT) to Bonita (east of Missoula, MT). Data from the Deer Lodge and Garrison sites were obtained from the River Algal Succession Study, a project funded by the Montana Consortium for Research on Environmental Water Systems. Data from Bonita were obtained from the Nitrogen Fixation Algal Study, a Research Experience for Undergraduates project. Benthic samples were obtained using a cylindrical benthic sampler isolating a known area of the river bed. Five samples were obtained at each site. Estimates of organic matter in biomass were obtained fr

openCC0Apr 2023View details →
edi56/100

H2Ohio Wetland Monitoring Program Vegetation Community Composition, Biomass, and Nutrient Content across Ohio, USA (2021-2022)

This data package includes vegetation community composition, percent cover, biomass, and nutrient concentration data from wetland projects across Ohio, USA, monitored by the H2Ohio Wetland Monitoring Program. Monitoring began in July 2021 and is ongoing, with annual updates planned. While data collection varies by site, most wetlands are surveyed to characterize vegetation and estimate nutrient stocks through community composition assessments and biomass sampling. Sampling points are randomly generated within and up to 5 meters outside the approximated wetland boundary. Surveys are conducted at points where wetland species (FAC–OBL) are present using a 1×1 meter quadrat to record species composition and percent cover. At approximately half of these locations, a 0.25×0.25 meter quadrat is placed outside the northeast corner to collect vegetation samples for nutrient analysis. In these smaller quadrats, community composition and percent cover are recorded prior to sampling aboveground biomass and, at approximately one third of those sites, belowground biomass. Datasets collected by the H2Ohio Wetland Monitoring Program containing surface water and soil nutrient concentration from samples collected at Ohio wetlands during the 2021–2022 sampling period can be found in an accompanying data package (edi.2087) at https://doi.org/10.6073/pasta/297bd6d93b4fcc8416e4225834db380e.

openCC (other)Nov 2025View details →
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Cross Bank Benthic Aboveground Biomass, Everglades National Park (FCE LTER), South Florida from 1983 to 2014 (Reformatted to the ecocomDP Design Pattern)

This data package is formatted as an ecocomDP (Ecological Community Data Pattern). For more information on ecocomDP see https://github.com/EDIorg/ecocomDP. This Level 1 data package was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-fce/1203/2. The abstract below was extracted from the Level 0 data package and is included for context: Aboveground biomass surveys of benthos on cross bank, a site of experimental fetilization via bird defecation since 1983. Dataset includes species specific biomass at five sites, each with both control and experimental treatments We are investigating how variability in regional climate, freshwater inputs, disturbance, and perturbations affect the coastal Everglades ecosystem. Our long term research program focuses on testing the following central idea and hypotheses: Regional processes mediated by water flow control population and ecosystem level dynamics at any location within the coastal Everglades landscape. This phenomenon is best exemplified in the dynamics of an estuarine oligohaline zone where fresh water draining phosphorus-limited Everglades marshes mixes with water from the more nitrogen-limited coastal ocean. Hypothesis 1: In nutrient-poor coastal systems, long-term changes in the quantity or quality of organic matter inputs will exert strong and direct controls on estuarine productivity, because inorganic nutrients are at such low levels. Hypothesis 2: Interannual and long-term changes in freshwater flow controls the magnitude of nutrients and organic matter inputs to the estuarine zone, while ecological processes in the freshwater marsh and coastal ocean control the quality and characteristics of those inputs. Hypothesis 3: Long-term changes in freshwater flow (primarily manifest through management and Everglades restoration) will interact with long-term changes in the climatic and disturbance (sea level rise, hurricanes, fires) regimes to modify ecological pattern

openCC (other)Aug 2021View details →
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Plant biomass, leaf area, carbon, nitrogen, and phosphorus in wet sedge tundra, 1994, Arctic LTER, Toolik Lake, Alaska.

Plant biomass, leaf area, carbon, nitrogen, and phosphorus were measured in three wet sedge tundra experimental sites. Treatments at each site included factorial NxP and at the Toolik sites greenhouse and shade house. Treatments started in 1985 (Sag site) and in 1988 (Toolik sites).

openCC (other)Feb 2023View details →
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Plant biomass in heath tundra experimental plots, 1996, Arctic LTER, Toolik Lake, Alaska.

Plant biomass in arctic heath experimental plots. Plots set up in 1989 with nitrogen, phosphorus, nitrogen plus phosphorus and a shade treatment were harvested for above ground biomass. Root mass was also measured on a smaller subsample.

openCC (other)Feb 2023View details →
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Plant biomass in mesic acidic tussock tundra, 1998 15Nitrogen controls, Toolik, Alaska.

Five or six quadrats (20cm x 20cm squares) along a line (block) were collected for plant biomass in mesic tussock tundra. In the lab each quadrat was separated into individual species, new and old aboveground and belowground biomass.

openCC (other)Feb 2023View details →
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Above and below ground plant biomass in Arctic LTER's 1981 mesic acidic tussock tundra experimental site (MAT81) harvested in 2000, Arctic LTER, Toolik Lake, Alaska.

Above and below-ground plant biomass, including plant roots, was measured in Arctic LTER's moist acidic tussock tundra experimental site (MAT81). The plots were set up in 1981 and have been harvested in previous years (See Shaver and Chapin Ecological Monographs, 61(1), 1991 pp.1-31). This file contains the 2000 harvested biomass and percent carbon and nitrogen summaries for control and fertilized plots. Leaf area data for select species are available in Shaver, G. 2016. https://doi.org/10.6073/pasta/13915ef410067ef23bad0faff678319c

openCC (other)Jul 2025View details →
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Above ground plant and below ground stem biomass in the Arctic LTER acidic tussock tundra experimental plots, 2002, Toolik Lake, Alaska.

Above ground plant and below ground stem biomass and their carbon and nitrogen content was measured in the Arctic LTER moist acidic tussock tundra experimental plots(MAT89). Treatments included control, nitrogen plus phosphorus amended plots for either 6 or 13 years and vole exclosure plots with or without amends of nitrogen and phosphorus. Note: The added Carbon and Nitrogen values were incorrectly added to the data sheet. A block of data was repeated for all treatments. In version 14 the values were corrected.

openCC (other)Mar 2024View details →
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Above ground plant, belowground stem and root biomass in Arctic Long-term Ecological Research's 2006 moist acidic tussock tundra experimental sites, 2012, Toolik Lake, Alaska.

Above ground plant, belowground stem and root biomass was measured in moist acidic tussock tundra experimental sites established in 2006 by the Arctic Long-term Ecological Research site (ARC-LTER. Control plots and plots amended with three different levels of nitrogen(N) and phosphorus(P), F10 (10 g/m2 N and 5 g/m2 P); F5 (5 g/m2 N and 2.5 g/m2 P); F2 (2 g/m2 N and 1 g/m2 P), were sampled.

openCC (other)Aug 2024View details →
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Macrophyte and microbial mat biomass co-variation along a hydrologic gradient and response to a removal experiment in temporary wetlands Everglades, FL, USA, February 2003 – November 2006

This data package encompasses hydrologic variables, soil depth, hydrologically-regulated macrophyte community types, macrophyte biomass and community structure, and microbial mat biomass that was collected in two observational surveys and one in-situ experimental manipulation in six temporary wetland regions located in the Everglades, FL, USA. The goal of this project was to examine the co-variation in macrophyte and microbial mat biomass along the hydrologic gradient present across wetland regions and to determine the type and strength of interactions occurring between the two communities, which was tested using a biomass (macrophyte or microbial mat) removal experiment. The census observational survey took place at 140 sites from 2003-04-09 to 2004-05-26, which were randomly distributed across the hydrologic gradient present across the six temporary wetland regions. The transect observational survey occurred along six transects and each was deliberately established along the present hydrologic gradient within each region; a total of 254 sites were sampled from 2003-02-19 to 2005-03-04. The experiment took place at three temporary wetland sites with contrasting hydroperiods (3 – 6 months), and four transects were established per site with 24 pairs of control and treatment plots per transect. The removal treatment occurred one year before data collection, and data collection occurred from 2004-06-20 to 2006-11-25. The package includes six datasets, one R code file, and two shape files associated with the R code. Data collection for all datasets is complete. FCE1274_Census_Survey includes hydrologically-regulated macrophyte community type classifications, macrophyte biomass, microbial mat ash-free dry mass, mean soil depth, water depth, mean annual hydroperiod, and vegetation-inferred hydroperiod; each site was sampled once during the survey period and a subset of sites were sampled each year. FCE1274_Transect_Survey includes macrophyte community type classifications

openCC (other)Dec 2024View details →
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Seasonal aboveground plant biomass estimates at 15 net primary production (NPP) study sites at Jornada Basin LTER from 1989-ongoing

This data package contains aboveground vegetation cover, volume, and calculated biomass values at the 15 Net Primary Production (NPP) study sites on Jornada Experimental Range (JER) and Chihuahuan Desert Rangeland Research Center (CDRRC) lands. Sites were selected to represent the 5 major ecosystem types in the Chihuahuan Desert (upland grasslands, playa grasslands, mesquite-dominated shrublands, creosotebush-dominated shrublands, tarbush-dominated shrublands). For each ecosystem type, three sites were selected to represent the range in variability in production and plant diversity; thus the locations are not replicates. All sites are excluded from domestic grazing. Eleven sites are in non-grazed pastures, and at the other four sites 1 hectare areas around the observational plots were fenced in 1988. At all sites a grid of 49 (48 at one playa location) 1m x 1m replicate quadrats was laid out when sampling began in 1989. For each quadrat, aboveground biomass has been calculated from two data sources: 1) non-destructive horizontal cover and vertical height measurements of individual plants, or plant parts, within each quadrat, and 2) linear regression coefficients for each plant species derived from off-quadrat cover, height, and harvested biomass measurements. Non-destructive measurements (1) are taken during winter, spring, and fall measurement campaigns, then aggregated by species for each quadrat, and resulting dimensions are used to calculate species biomass (grams) by quadrat and season using using the species-specific regression coefficients derived from dataset 2. This is the most detailed biomass dataset available and can be used to derive values of net primary production between seasons or annually. Each dataset record contains calculated biomass (and related variables) by species, quadrat, season, and site. Data collection is ongoing with new observations in spring, fall, and winter of each year, but this data package may be updated less frequently. Attenti

openCC (other)Aug 2023View details →
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Biomass of harvested annual and perrenial forbs and grasses along fertilized and unfertilized ecosystem transects at the Jornada Basin LTER site in 1989

This data package contains biomass data for annual or perennial grasses and forbs harvested from quadrats along the Jornada Basin LTER (LTER-I) transects in southern New Mexico, USA. These transects are located in a livestock exclosure established in 1982 in the Chihuahuan Desert Rangeland Research Center (CDRRC) and run from the middle of the College Playa up to the foot of Mt. Summerford (2.7 km in length). Prior to the exclosure, the study site was moderately to heavily grazed for the past 100 years. The Treatment transect was treated annually with ammonium nitrate fertilizer (NH4NO3 at 10g N/m2/yr) until 1987. Along each transect, 91 stations, each with a plant intercept line, are spaced at 30 meter intervals. Each plant intercept line is perpendicular to the transect and is 30 meters in length broken into 5-meter segments. The included dataset includes biomass data for grasses and forbs clipped from 1 square meter quadrats directly downslope from some, but not all, of these segments. The harvest measurements occurred in September 1989. Data consists of the date, transect, station number, quad, JRN and USDA Plants species codes, species binomial, habit, form, and biomass. This study is complete.

openCC (other)Dec 2021View details →
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PAB01 Aboveground net primary productivity of tallgrass prairie based on accumulated plant biomass on core LTER watersheds (001d, 004b, 020b)

Data set contains estimates of end-of-season standing crop biomass (grams per square meter) of live graminoids, forbs, woody plants, and previous year's dead vegetation for 2 soil types (shallow and deep) on three core LTER watersheds representing three fire frequency treatments. Twenty quadrats (0.1 square meters) are harvested for each soil/treatment type. NOTE: Early (April) and mid-season (July) biomass was collected from 1983-1988, and these data are available by request.

openCC0Jun 2025View details →
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Rhizaria abundance, biomass, and trophic interactions at the Northern Gulf of Alaska LTER site during summer 2023 cruise KM2308

This dataset consists of Rhizaria abundance, biomass, number of individuals with captured prey, and number of individuals that interacted with algal cells, by taxonomic group. Taxonomic group ID characteristics and biomass calculation details are also presented. Sampling occurred on NGA-LTER research cruise KM2308 during summer 2023 at four stations and four different depth-intervals. Seawater samples were collected from CTD-secured Niskin bottles, concentrated by reverse filtration with 50 μm mesh, and analyzed back in the lab with inverted epi-fluorescence microscopy. Excel spreadsheets were converted to CSV files for preservation. These data are part of the Northern Gulf of Alaska Long Term Ecological Research (NGA LTER) program. The LTER program is a National Science Foundation–funded network of 28 sites nationwide that focus on the influence of long-term and large-scale phenomenon on ecosystems. Additional funding for sampling is provided by the North Pacific Research Board (NPRB), the Alaska Ocean Observing System (AOOS), and the Exxon Valdez Oil Spill Trustee Council (EVOS) via the Gulf Watch Alaska program.

openCC0Apr 2025View details →
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North Temperate Lakes LTER: Macrophyte Biomass - Trout Lake 1983 - current

These data are collected to document and characterize the submersed macrophytes of Trout Lake and to evaluate their long-term dynamics and interactions with other compartments of the ecosystem. Four sites along the shoreline of Trout Lake have been sampled annually in August along permanent line transects. This dataset includes biomass per m2 for individual species at three depths along the transect. These data are useful in determining the annual variability of the submersed macrophytes and providing information on the effects of the invasion of an introduced crayfish Sampling Frequency: annually during summer Number of sites: 4

openCC (other)Nov 2022View details →
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Cross Lake Comparison at North Temperate Lakes LTER - Zooplankton Biomass Study 2006

This project investigates why zooplankton size, but not biomass, has been found to influence the phosphorus (TP) - chlorophyll a (chl a) relationship (Pace 1984, Carpenter et al. 1991, Carpenter et al. 2001).

openCC (other)Nov 2022View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record