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Fig. 6. K2P pairwise comparisons generated from MEGA X in Biodiversity of the Buffalo Leeches Genus (Arhynchobdellida, Hirudinidae) in Southern Thailand Revealed from DNA Barcoding.
Fig. 6. K2P pairwise comparisons generated from MEGA X showing barcoding gaps of 1.54 to 2.88% between intra- and interspecific genetic distances of buffalo leeches genus Hirudinaria.
Fig. 5 in Biodiversity of the Buffalo Leeches Genus (Arhynchobdellida, Hirudinidae) in Southern Thailand Revealed from DNA Barcoding.
Fig. 5. Genetic distance based on K2P model from BOLD. (A) comparison of maximum intraspecific distance of each species and distance to its nearest neighbor (B) comparison of mean intraspecific distance of each species and distance to its nearest neighbor. Red diagonals indicate where intraspecific distance equals distance to nearest neighbor.
Fig. 3 in Biodiversity of the Buffalo Leeches Genus (Arhynchobdellida, Hirudinidae) in Southern Thailand Revealed from DNA Barcoding.
Fig. 3. BEAST ultrametric tree of buffalo leeches genus Hirudinaria. Leeches from southern Thailand are highlighted in bold. Numbers on nodes are bootstrap values from ML tree generated by IQ-TREE, Bayesian posterior probability from BI tree generated by MrBayes, and from ultrametric tree generated by BEAST, respectively. Black bars indicate morphological identification (MORPHO) and delineated OTUs suggested by four species delimitation approaches (GMYC, bPTP, BIN, and ABGD). Grey bars indicate samples that were not available for morphological identification.
Fig. 2 in Biodiversity of the Buffalo Leeches Genus (Arhynchobdellida, Hirudinidae) in Southern Thailand Revealed from DNA Barcoding.
Fig. 2. External morphology of living Hirudinaria leeches from southern Thailand. (A) dorsal and (B) ventral sides of H. bpling from Satun Province (C) dorsal and (D) ventral sides of H. manillensis 3 from Songkhla Province. Scale bar = 1 cm.
Fig. 1 in Biodiversity of the Buffalo Leeches Genus (Arhynchobdellida, Hirudinidae) in Southern Thailand Revealed from DNA Barcoding.
Fig. 1. Map showing sampling localities of buffalo leeches genus Hirudinaria in (A) Asia and (B) southern Thailand. Dotted lines indicate hypothetical fauna transition zones in southern Thailand: Isthmus of Kra and Surat Thani-Krabi Line.
Fig. 4. Maximum Likelihood phylogenetic tree generated using N in The African buffalo parasite Theileria. sp. (buffalo) can infect and immortalize cattle leukocytes and encodes divergent orthologues of Theileria parva antigen genes
Fig. 4. Maximum Likelihood phylogenetic tree generated using N-terminal sequences of T. sp. (buffalo) and T. parva PIM antigen genes. Maximum composite likelihood trees were constructed using 1000 bootstrap replicates as implemented in MEGA5; the optimal nucleotide substitution model was identified using data monkey. The tree constructed with RAxML (Stamatakis et al., 2014) using a GTR/G/I model with 100 bootstrap iterations.
Fig. 5 in The African buffalo parasite Theileria. sp. (buffalo) can infect and immortalize cattle leukocytes and encodes divergent orthologues of Theileria parva antigen genes
Fig. 5. Maximum Likelihood Phylogenetic trees illustrating the genetic relationships of T. parva CD8 T target antigen gene orthologues from T. sp. (buffalo). Panel (A) Tp6; Panel B Tp7: Panel C Tp8. Sequences were aligned and used to construct a maximum likelihood tree, at which the nodes were confirmed using 1000 bootstrap replications. The bootstrap values indicating the degree of support for each node are shown and also the GenBank accession numbers of the sequences. For Tp6, the tree was rooted using the prohibitin gene sequences present in Babesia bovis (XM001609045) and Theileria orientalis (AB161472). For Tp7, the tree was rooted using the putative Heat shock protein 90 gene sequences from Toxoplasma gondii (AY344115), Babesia bovis (AK442026) and Theileria annulata (XM_947380). For Tp8, the tree was rooted using an orthologue of Tp8 found in Theileria equi (CP001669).
Fig. 3 in The African buffalo parasite Theileria. sp. (buffalo) can infect and immortalize cattle leukocytes and encodes divergent orthologues of Theileria parva antigen genes
Fig. 3. PCR amplification of genes encoding Theileria parva antigens from Marula schizont-infected leukocyte cultures. Panel A, p104 primers; Panel B PIM, primers; Panel C p67 primers. The order of the schizont-infected lymphocyte samples is (1) N6; (2). N13; (3). N18; (4). N20; (5). N33; (6). N36; (7). N38; (8). N43; (9). N50; (10). N55; (11). N69; (12). N76; (13). N77, (14). N79; (15). N86, (16). N88; (17). N99; (18). N100; (19). N102; (20). N103; (21). N106; (22). N107.
Fig. 2 in The African buffalo parasite Theileria. sp. (buffalo) can infect and immortalize cattle leukocytes and encodes divergent orthologues of Theileria parva antigen genes
Fig. 2. Results of a semi-nested PCR assay used to amplify 18S ribosomal subunit DNA using primers specific for T. parva and T. sp. (buffalo). Samples are as follows: 1)N13 2)N18 3) N20 4)N33 5)N36 6) N43 7)N50 8)N55 9) N69 10)N76 11) N79 12) N86 13) N88 14) N99 15)N100 16) N102 17) N103 18)N107 19—21) T. parva clones 22—24) T. sp. (buffalo) clones (documented in Table 2).
Fig. 1 in The African buffalo parasite Theileria. sp. (buffalo) can infect and immortalize cattle leukocytes and encodes divergent orthologues of Theileria parva antigen genes
Fig. 1. Reverse line blot analysis of schizont cultures containing parasites isolated from Marula farm. The following species-specific oligonucleotide probes were used (a) T. annulata, (b) T. parva, (c) T. mutans, (d) T. velifera, (e) T. taurotragi, (f) T. buffeli, (g) T. sp. (buffalo). (h) B. bigemina, (i) B. bovis. The order of the experimental samples hybridized is DNA from cell culture isolates in lanes 1—22 was lane 1; (1) N6, (2) N13, (3) N18, (4) N20, (5) N33, (6) N36, (7) N38 (8) N43, (9) N50 (10) N55, (11) N69, (12) N76, (13) N77, (14) N79, (15) N88, (16) N99, (17) N100 (18) N103, (19) N106, (20) N107, (21) N86, (22) N102 and DNA extracted from whole cattle blood (23) N106 (24) N69 (25) N86.
Fig. 3 in The first report of hydatid disease (Echinococcus granulosus) in an Australian water buffalo (Bubalus bubalis)
Fig. 3. Section of a PAS-stained hepatic hydatid cyst from a 3 year old female water buffalo from a farm in New South Wales, Australia (LL = laminated layer; GL = germinal layer (detatched, normally closely applied to the laminated layer).
Fig. 1 in The first report of hydatid disease (Echinococcus granulosus) in an Australian water buffalo (Bubalus bubalis)
Fig. 1. One of the buffalo grazing paddocks abutting State Forest containing populations of wild dogs (dingoes and/or dingo/domestic dog hybrids).
Fig. 2. Pulmonary hydatid cyst from a 3 year old female water buffalo from a in The first report of hydatid disease (Echinococcus granulosus) in an Australian water buffalo (Bubalus bubalis)
Fig. 2. Pulmonary hydatid cyst from a 3 year old female water buffalo from a farm in New South Wales, Australia.
Fig. 2 in Occurrence of Amblyomma mixtum on the water buffalo (Bubalus bubalis) in Mexico
Fig. 2. Morphological characters used for Amblyomma mixtum identification: Dorsal view A) Female, B) Male; Zoom of the notum of the female C) and the scutum of the male D); Dorsal view of the capitulum of the female E) and male F); Ventral view of the female G); Dentition of the hypostome H).
Figures 1–9 in Rumen ciliate biota of water buffalo (Bubalus bubalis Linnaeus, 1758) in Kastamonu, Turkey
Figures 1–9. Photomicrographs of some rumen ciliates of the water buffaloes in Kastamonu, Turkey, after pyridinated silver carbonate impregnation. 1- Entodinium ellipsoideum from the right side, 2- En. bursa from the right side, 3- En. dilobum from the left side, 4- En. bimastus from the right side, 5- En. triacum m. triacum from the left side, 6- En. longinucleatum from the left side, 7- En. simulans m. caudatum from the right side, 8- Diplodinium anisacanthum m. monocanthum from the right side, 9- D. dentatum from the right side. ACZ, Adoral ciliary zone; AP, adoral polybrachykinety; DP, dorsal polybrachykinety; VP, vestibular polybrachykinety.
Figure 2 in Investigation of GH and GHR Alu I gene polymorphisms on meat yields in Anatolian water buffalo breed using PCR-RFLP method
Figure 2. Enzyme digestion results of exons 4 and 5 of the GH gene (M: 50-bp DNA ladder; 1–5 and 7: LL genotype, 6: LV genotype).
Figure 4 in Investigation of GH and GHR Alu I gene polymorphisms on meat yields in Anatolian water buffalo breed using PCR-RFLP method
Figure 4. Enzyme digestion results of the exon 10 region of the GHR gene (M: 50-bp DNA ladder, A: AG genotype, B: AA genotype).
Fig. 1 in Investigations into the carrier-state of Theileria sp. (buffalo) in cattle
Fig. 1. Frequency distribution curves for Theileria parva and Theileria sp. (buffalo) positive animals. Indicated are frequency distribution plots of the CP values and the percentage observed in buffalo from National Parks, buffalo from the Bedrog ranch, and cattle from the Bedrog ranch sampled during the outbreak (3/12/2013) and monitored afterwards for T. parva (top panel) and T. sp. (buffalo) (bottom panel).
Fig. 2 in Investigations into the carrier-state of Theileria sp. (buffalo) in cattle
Fig. 2. Monitoring of Theileria parva and Theileria sp. (buffalo) positive animals over a period of 24 months. The gray shaded areas indicate CP values below the cutoff of the PCR assays. Stars indicate animals that were splenectomized and the arrow indicate the date of splenectomy. The cross indicates an animal that died of natural causes.
Fig. 2 in Epidemiology of Anaplasma marginale and Anaplasma centrale infections in African buffalo (Syncerus caffer) from Kruger National Park, South Africa
Fig. 2. Individual value plots showing the distribution of results for intensity of infection (log-transformed number of copies/reaction) with Anaplasma marginale (a) and Anaplasma centrale (b), using a real-time qPCR from a managed African buffalo (Syncerus caffer) herd from Kruger National Park, South Africa. Error bars represent one standard error, numbers at the top of figure represent sample size.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.