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40
datasets available to search
ShareScore release 0.9.0
Dataset results
40 results for “cortical layers”
Data from "Leveraging mouse chromatin data for heritability enrichment informs common disease architecture and reveals cortical layer contributions to schizophrenia"
<p>All the data is from the final version of a paper exploring schizophrenia heritability with mouse chromatin data. The manuscript is entitled:</p> <p>"Leveraging mouse chromatin data for heritability enrichment informs common disease architecture and reveals cortical layer contributions to schizophrenia"</p> <p>The published manuscript can be found here: To be updated soon</p> <p>bioRxiv versions of the manuscript can be found here: <a href="https://www.biorxiv.org/content/10.1101/427484v1">https://www.biorxiv.org/content/10.1101/427484</a></p> <p>Code for analyzing and producing data can be found on GitHub: <a href="https://github.com/pwh124/open_chromatin">https://github.com/pwh124/open_chromatin</a></p>
Brain state and cortical layer-specific mechanisms underlying perception at threshold
<p>Dataset for Morton et al. 2024. eLife</p> <p>https://doi.org/10.7554/eLife.91722.3</p>
sFANS RNAseq profiling of deep layer cortical cell types from human control and Huntington's Disease samples
GEO Series GSE233408. Homo sapiens. 163 samples. Type: Expression profiling by high throughput sequencing.
Sliced Human Cortical Organoids for Modeling Distinct Cortical Neuronal Layer Formation
GEO Series GSE137941. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Spatial transcriptomics]
GEO Series GSE259405. Mus musculus. 12 samples. Type: Other.
Single cell transcriptomics analysis of induced pluripotent stem cell-derived cortical neurons reveals frequent dual layer identity
GEO Series GSE69790. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Cortical RORb is required for layer 4 transcriptional identity and barrel integrity
GEO Series GSE138001. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Neonatal Tbr1 Dosage Controls Cortical Layer 6 Connectivity.
GEO Series GSE119362. Mus musculus. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Differential gene expression in postnatal day 10 Scn1b+/+ vs. Scn1b -/- cortical layer VI
GEO Series GSE128573. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Distinct Layer 6b transcriptomic subtypes parcellate the cortical mantle
GEO Series GSE299810. Mus musculus. 8 samples. Type: Other.
Complementary networks of cortical somatostatin interneurons enforce layer specific control
GEO Series GSE153824. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
sFANS enriched snRNAseq profiling of deep layer cortical cell types from human control and Huntington's Disease samples
GEO Series GSE233387. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Unique molecular features and cellular responses differentiate two populations of motor cortical Layer 5b neurons in a preclinical model of ALS.
GEO Series GSE172484. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.
Repetitive transcranial magnetic stimulation induces cortical layer, brain region, and protocol dependent neural plasticity [Bulk RNA-seq]
GEO Series GSE259403. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Clinical Study of How Information Flows Across the Human Cortical Sheet Layers (Laminae), Aiming to Discover Key Principles of Laminar Circuits and Information Flow for Complex Behavior.
ClinicalTrials.gov study NCT07073391. IPD Sharing: NO. Countries: 0. Publications: 0.
Aberrant cortical layer development of brain organoids developed from Noonan syndrome-iPSCs
GEO Series GSE213798. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
DOT1L and H3K79 methylation refer layer identity by controlling temporo-spatial expression of key transcription factors in cortical development
GEO Series GSE95834. Mus musculus. 31 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Integrative analysis of long isoform sequencing and functional data identifies distinct cortical layer neuronal subtypes derived from human iPSC
GEO Series GSE274249. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Expansion of outer cortical layer Cux2+ neurons required selective adaptations for DNA repair
GEO Series GSE314470. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Data related to "Upper cortical layer-driven network impairment in schizophrenia" paper, by Batiuk, Tyler et al.
<p>This is Supplementary Dataset for "Upper cortical layer-driven network impairment in schizophrenia" paper, by Batiuk, Tyler et al.</p> <p> </p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.