Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
291
datasets available to search
ShareScore release 0.7.1
Dataset results
291 results for “cycle gene”
Data from: Pleiotropy in the wild: the dormancy gene DOG1 exerts cascading control on life-cycles
In the wild, organismal life cycles occur within seasonal cycles, so shifts in the timing of developmental transitions can alter the seasonal environment experienced subsequently. Effects of genes that control the timing of prior developmental events can therefore be magnified in the wild because they determine seasonal conditions experienced by subsequent life stages, which can influence subsequent phenotypic expression. We examined such environmentally-induced pleiotropy of developmental-timing genes in a field experiment with Arabidopsis thaliana. When studied in the field under natural seasonal variation, an A. thaliana seed-dormancy gene, Delay Of Germination 1 (DOG1), was found to influence not only germination, but also flowering time, overall life history, and fitness. Flowering time of the previous generation, in turn, imposed maternal effects that altered germination, the effects of DOG1 alleles, and the direction of natural selection on these alleles. Thus under natural conditions, germination genes act as flowering genes and potentially vice versa. These results illustrate how seasonal environmental variation can alter pleiotropic effects of developmental-timing genes, such that effects of genes that regulate prior life stages ramify to influence subsequent life stages. In this case, one gene acting at the seed stage impacted the entire life cycle.
Gene expression of neurotransmitter receptors over reproductive cycle of Nicrophorus vespilloides
<p>Understanding genetic influences of traits in non-model organisms is crucial to understanding how novel traits arise. Do new traits require new genes, or are old genes repurposed? How predictable is this process? Here we examine this question for gene expression influencing parenting behavior in a beetle, <i>Nicrophorus</i> <i>vespilloides</i>. Parental care, produced from many individual behaviors, should be influenced by changes of expression of multiple genes and one suggestion is that the genes can be predicted based on knowledge of behavior expected to be precursors to parental care, such as, aggression, resource defense, and mating on a resource. Thus, testing gene expression during parental care allows us to test expectations of this "precursor hypothesis" for multiple genes and traits. We tested for changes of the expression of serotonin, octopamine/tyramine, and dopamine receptors, as well as, one glutamate receptor, predicting that these gene families would be differentially expressed during social interactions with offspring and associated resource defense. We found that serotonin receptors were strongly associated with social and aggression behavioral transitions. Octopamine receptors produced a complex picture of gene expression over a reproductive cycle. Dopamine was not associated with the behavioral transitions sampled here, while the glutamate receptor was most consistent with a behavioral change of resource defense/aggression. Our results generate new hypotheses, refine candidate lists for further studies, and inform the genetic mechanisms that are co-opted during the evolution of parent-offspring interactions, a likely evolutionary path for many lineages that become fully social. The precursor hypothesis, while not perfect, does provide a starting point for identifying candidate genes.</p>
Efficacy of Palbociclib in Advanced Acral Melanoma With Cell Cycle Gene Aberrations
ClinicalTrials.gov study NCT03454919. IPD Sharing: Not stated. Countries: 0. Publications: 1.
Lung-MAP: Palbociclib as Second-Line Therapy in Treating Cell Cycle Gene Alteration Positive Patients With Recurrent Stage IV Squamous Cell Lung Cancer
ClinicalTrials.gov study NCT02785939. IPD Sharing: Not stated. Countries: 1. Publications: 0.
Data from: A proteomic chronology of gene expression through the cell cycle in human myeloid leukemia cells
Open the record for dataset details and reuse information.
Data from: Polyamines in the life of Arabidopsis: profiling the expression of S-adenosylmethionine decarboxylase (SAMDC) gene family during its life cycle
Open the record for dataset details and reuse information.
Data from: Pleiotropy in the wild: the dormancy gene DOG1 exerts cascading control on life-cycles
Open the record for dataset details and reuse information.
Data from: The life cycle of Drosophila orphan genes
Open the record for dataset details and reuse information.
Gene expression of neurotransmitter receptors over reproductive cycle of Nicrophorus vespilloides
Open the record for dataset details and reuse information.
High concentration of adrenaline blocks key cell cycle genes and exhibits antifibrotic and vasoconstrictor effects in glaucoma surgery
GEO Series GSE213217. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Transcriptional inhibition after irradiation occurs preferentially at highly expressed genes in a manner dependent on cell cycle progression
GEO Series GSE217123. Mus musculus. 4 samples. Type: Other; Expression profiling by high throughput sequencing.
PPIB-regulated alternative splicing of cell cycle gene contributes to its regulation of cell proliferation
GEO Series GSE188372. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic and phylogenetic analysis of a bacterial cell cycle reveals strong associations between gene co-expression and evolution
GEO Series GSE46915. Caulobacter vibrioides. 15 samples. Type: Expression profiling by high throughput sequencing.
Global analysis of cell cycle gene expression of the legume symbiont Sinorhizobium meliloti
GEO Series GSE54208. Sinorhizobium meliloti 1021; Sinorhizobium meliloti. 31 samples. Type: Expression profiling by array.
RNA-seq analysis of glyoxylate cycle-dependent genes
GEO Series GSE70582. Burkholderia glumae BGR1. 3 samples. Type: Expression profiling by high throughput sequencing.
Down-regulation of linc00598 affects cell cycle related genes in HEK293t cells
GEO Series GSE80514. Homo sapiens. 6 samples. Type: Expression profiling by array.
Gene expression profiles in the bovine corpus luteum (CL) of the estrous cycle and pregnancy: Possible roles of chemokines in regulating CL function during pregnancy
GEO Series GSE59770. Bos taurus. 16 samples. Type: Expression profiling by array.
qPCR array study for cell cycle related genes in Caco-2 cells treated with human lectin ZG16p
GEO Series GSE84321. Homo sapiens. 6 samples. Type: Expression profiling by RT-PCR.
Dynamic O-GlcNAc cycling at promoters of C. elegans genes regulating Longevity, Stress, and Immunity
GEO Series GSE18132. Caenorhabditis elegans. 72 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by genome tiling array; Other.
Elevation in cell cycle and protein metabolism gene transcription in inactive colonic tissue from Icelandic patients with ulcerative colitis
GEO Series GSE105074. Homo sapiens. 57 samples. Type: Expression profiling by array.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.