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265 results for “developer tools”
Timbral Characterisation Tool v0.1 Development Dataset
<p>This dataset contains data generated as part of the AudioCommons project (DS 5.2.1). Data relate to the development of Deliverable D5.2 which was the first prototype of a set of timbral characterisation tools for semantically annotating audio content.</p> <p>Data comprise Max-based listening test interfaces, audio files, test results in the form of csv files, and documentation.</p> <p><strong>References</strong></p> <p>D5.2 (2016): A.Pearce, T.Brookes, R.Mason, "First prototype of timbral characterisation tools for semantically annotating non-musical content", AudioCommons Deliverable Report<br> - http://www.audiocommons.org/materials/</p> <p>Martin (2017): C.Martin, "Timbral Tagging: Towards the Development of a model for Metallic-natured sounds", Undergraduate technical project, Institute of Sound Recording, University of Surrey, Guildford, Surrey, UK.</p>
Replication Package for "How Developers Engage with Static Analysis Tools in Different Contexts"
<p>This is the replication package for the paper "How Developers Engage with Static Analysis Tools in Different Contexts".</p> <p>We include all the artifacts necessary to replicate the results obtained in our paper. Specifically, we provide (i) the survey questions together with all the valid answers we received including the demographics of our respondents, (ii) the most relevant statements that we extracted from the interviews including the demographics of our interviewees, (iii) the results of the card sorting performed on the development activities where our participants adopt Static Analysis Tools, (iv) all the data related to Krippendorff’s Alpha calculation for the performed card sorting, and (v) mapping of ASATs to the "rules" categories defined by Novak et al. (2010) and script for calculating occurrence, definition, and enforcement of the different ASAT types together with input and output data. Furthermore, we include the list of links to Reddit posts and inspected open-source projects together with their inspection data and the scripts for computing the inter-rater agreement during the inspection. Finally, we provide the Github features computed for each project and script for generating the sets of projects.</p>
Development of tools to rapidly identify cryptic species and characterize their genetic diversity in different European kelp species
<p>Marine ecosystems formed by kelp forests are severely threatened by global change and local coastline disturbances in many regions. In order to take appropriate conservation, mitigation and restoration actions, it is crucial to identify the most diverse populations which could serve as a "reservoir" of genetic diversity. This requires the development of specific tools, such as microsatellite markers to investigate the level and spatial distribution of genetic diversity. Here, we tested new polymorphic microsatellite loci from the genome of the kelp, <i>Lamina</i><i>ria digitata,</i> and tested them for cross-amplification and polymorphism in four closely related congeneric species (<i>Laminaria hyperborea, Laminaria ochroleuca, Laminaria rodriguezii and Laminaria pallida</i>). Adding these 20 new microsatellite loci to the ten <i>L. digitata</i> loci previously developed by Billot et al. (1998) and Brenan et al. (2014) and to the ten <i>L. ochroleuca</i> loci previously developed by Coelho et al. (2014), we retained a total of 30 polymorphic loci for <i>L. digitata</i>, 19 for <i>L. hyperborea</i>, 16 for <i>L ochroleuca</i>, 19 for<i> L. rodriguezii</i> and 12 for<i> L. pallida</i>. These markers have been tested for the first time in the last two species. As predicted, the proportion of markers that cross-amplified between species decreased with increasing genetic distance. In addition, as problems of species identification were reported in this genus, mainly between <i>L. digitata </i>and <i>Hedophyllum nigripes</i>,<i> </i>but also between <i>L. digitata, L. hyperborea </i>and<i> L. ochroleuca </i>in areas where their range distributions overlap, we report a rapid PCR identification method based on species-specific cox1 mitochondrial primers that allows these four species of kelp to be rapidly distinguished.</p>
Argument maps as tools to support the development of new media literacies: a systematic review.
<p>The post-digital era is characterized by the vast presence of platforms imposing their digital affordances and algorithmic control on our behavior. This environment is challenging education and training, with implications for digital and transmedial literacy. Investigating instructional methodologies is crucial to foster critical comprehension of such novel informational environments. The argument maps (AM), which were first created and evaluated in static information contexts (analogical/old web), could be useful in the emergence of dynamic (post-digital) textual forms.</p> <p>The current paper describes a comprehensive literature review based on the assumptions above. We looked into state of the art in research on using AM to handle dynamic information. We found 150 papers using a PRISMA procedure and then examined 25 of them. Our review produced pertinent data about the current state of AM, including the sorts of texts on which they are used and the tools (especially digital and AI-based) that have been employed. Our research lays the groundwork for teaching the literacies needed in new informational settings, such as multimodal, dynamic, algorithmic, and data-driven contexts, with a specific focus on AM as an effective mediational tool.</p> <p>This Zenodo record presents the full dataset composed of the following sheets:</p> <ol> <li>Codebook</li> <li>Italian Journals</li> <li>List of articles extracted from SCOPUS</li> <li>List of articles extracted from ERIC</li> <li>List of articles extracted from WOS</li> <li>List of articles extracted from DOAJ</li> <li>PRISMA workflow</li> <li>Analysis - First Level (classification of 25 articles selected)</li> <li>Analysis - Second Level (List of 19 articles selected)</li> <li>Final Dataset</li> <li>Interrater Agreement.</li> </ol> <p>As for the Keywords' Map, a primo file .txt displays the text over which basis was performed the keyword maps analysis. The second .txt file shows notes relating to the analysis procedures using the software VOS-Viewer <a href="http://www.vosviewer.com/">http://www.vosviewer.com/</a> </p> <p>Any comments or improvements are welcome!</p>
Towards the generation of gnotobiotic larvae as a tool to investigate the influence of the microbiome on the development of the amphibian immune system
<div> <div> <div> <p>The immune equilibrium model suggests that exposure to microbes during early life primes immune responses for pathogen exposure later in life. While recent studies using a range of gnotobiotic (germ-free) model organisms offer support for this theory, we currently lack a tractable model system for investigating the influence of the microbiome on immune system development. Here, we used an amphibian species (<em>Xenopus laevis</em>) to investigate the importance of the microbiome in larval development and susceptibility to infectious disease later in life. We found that experimental reductions of the microbiome during embryonic and larval stages effectively reduced microbial richness, diversity, and altered community composition in tadpoles prior to metamorphosis. In addition, our antimicrobial treatments resulted in few negative effects on larval development, body condition, or survival to metamorphosis. However, contrary to our predictions, our antimicrobial treatments did not alter susceptibility to the lethal fungal pathogen <em>Batrachochytrium dendrobatidis</em> (<em>Bd</em>) in the adult life stage. While our treatments to reduce the microbiome during early development did not play a critical role in determining susceptibility to disease caused by <em>Bd</em> in <em>X</em>. <em>laevis</em>, they nevertheless indicate that developing a gnotobiotic amphibian model system may be highly useful for future immunological investigations.</p> </div> </div> </div>
Data from: Comparative LCA studies of simulated HMF-biorefineries from maize and miscanthus as an example of first- and second-generation biomass as a tool for process development
<p class="MsoNormal"><span>5-Hydroxymethylfurfural (HMF) is a versatile platform chemical for a fossil free, bio-based chemical industry. HMF can be produced by using fructose as a feedstock. Using edible, first-generation biomass to produce chemicals has been questioned in terms of potential competition with food supply. Second-generation biomass like miscanthus could be an alternative. However, there is a lack of information if second-generation lignocellulosic biomass is a more sustainable feedstock to produce HMF. Therefore, a life cycle assessment was performed in this study to determine the environmental impacts of HMF production from miscanthus and to compare it with HMF from high fructose corn syrup (HFCS). HFCS from either Hungary or Baden-Württemberg (Germany) was considered. Compared to the HFCS biorefineries the miscanthus concept is producing less emissions in all impact categories studied, except land occupation. Overall, the production and usage of second-generation biomass could be especially beneficial in areas where the use of N-fertilizers is restricted. Besides, conclusions for the further development of the on-farm-biorefinery concept were elaborated. For this purpose, process simulations from a previous study were used. Results of the previous study in terms of TEA and the current LCA study in terms of environmental sustainability indicate that the lignin depolymerization unit in the miscanthus biorefinery has to be improved. The scenario without lignin depolymerization performs better in all impact categories. The authors recommend to not further convert the lignin to products like phenol and other aromatic compounds. The results of the contribution analyses show that the major impact in the HMF production is caused by the auxiliary materials in the separation units and the required heat. Further technical development should focus on efficient heat as well as solvent use and solvent recovery. At this point further optimizations will lead to reduced emissions and costs at the same time. The presented data set is the used inventory to model the environmental impacts. </span></p>
GERDAT021-Dataset for "Development and testing of the Outcome Prioritization Tool adjusted to older patients with cancer: A pilot study"
<p>This dataset shows the data underlying the publication "Development and testing of the Outcome Prioritization Tool adjusted to older patients with cancer: A pilot study published in JGO on 21 July 2023, which can be found at <a href="https://doi.org/10.1016/j.jgo.2023.101590">10.1016/j.jgo.2023.101590</a>."</p>
The Use of VR/AR End-User Development Tools in Education: Lessons Learned and Future Challenges
<p>Dataset of the paper "The Use of VR/AR End-User Development Tools in Education: Lessons Learned and Future Challenges"</p>
Developing an Imaging-Based Tool to Identify Areas for Prostate Cancer Biopsy
ClinicalTrials.gov study NCT03585660. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
Developing and Evaluating a Machine-Learning Opioid Overdose Prediction & Risk-Stratification Tool in Primary Care
ClinicalTrials.gov study NCT06810076. IPD Sharing: NO. Countries: 1. Publications: 5.
Development and Testing of a Pediatric Cervical Spine Injury Risk Assessment Tool
ClinicalTrials.gov study NCT05049330. IPD Sharing: NO. Countries: 1. Publications: 2.
Developing a COMputerised Bone Age Tool
ClinicalTrials.gov study NCT02617901. IPD Sharing: NO. Countries: 1. Publications: 3.
Developing and Testing a Personalized Evidence-based Shared Decision-making Tool for Stent Selection
ClinicalTrials.gov study NCT02046902. IPD Sharing: UNDECIDED. Countries: 1. Publications: 2.
Efficacy Side-effect Score (ESS): Development and Evaluation of a New Tool for Patients After Surgery
ClinicalTrials.gov study NCT02143128. IPD Sharing: YES. Countries: 2. Publications: 1.
Development of tools to rapidly identify cryptic species and characterize their genetic diversity in different European kelp species
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Data from: Comparative LCA studies of simulated HMF-biorefineries from maize and miscanthus as an example of first- and second-generation biomass as a tool for process development
Open the record for dataset details and reuse information.
Towards the generation of gnotobiotic larvae as a tool to investigate the influence of the microbiome on the development of the amphibian immune system
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Data from: First insights into the transcriptome and development of new genomic tools of a widespread circum-Mediterranean tree species, Pinus halepensis Mill.
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Development of a tool for quantifying need-supportive coaching in technology-mediated exercise classes
Open the record for dataset details and reuse information.
Tool for genomic selection and breeding to evolutionary adaptation: Development of a 100K single nucleotide polymorphism array for the honey bee
High-throughput high density genotyping arrays continue to be a fast, accurate, and cost-effective method for genotyping thousands of polymorphisms in high numbers of individuals. Here we have developed a new high-density SNP genotyping array (103 270 SNPs) for honey bees, one of the most ecologically and economically important pollinators worldwide. SNPs were detected by conducting whole genome resequencing of 61 honey bee drones (haploid males) from throughout Europe. Selection of SNPs for the chip was done in multiple steps using several criteria. The majority of SNPs were selected based on their location within known candidate regions or genes underlying a range of honey bee traits, including hygienic behaviour against pathogens, foraging and subspecies. Additionally, markers from a GWAS of hygienic behaviour against the major honey bee parasite Varroa destructor, were brought over. The chip also includes SNPs associated with each of three major breeding objectives - honey yield, gentleness and Varroa resistance. We validated the chip and make recommendations for its use by determining error rates in repeat genotypings, examining the genotyping performance of different tissues, and by testing how well different sample types represent the queen's genotype. The latter is a key test because it is highly beneficial to be able to determine the queen's genotype by non-lethal means. The array is now publicly available and we suggest it will be a useful tool in genomic selection and honey bee breeding, as well as for GWAS of different traits, and for population genomic, adaptation and conservation questions.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.