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97 results for “energy flux”
UFLUX European ensemble 0.25deg daily carbon, water, and energy fluxes from 2000 - 2020
<h3>UFLUX Ensemble Europe025ddaily (European 0.25° Daily)</h3> <p><strong>Overview</strong><br>The <strong>UFLUX ensemble dataset</strong> offers <strong>European daily fluxes at 0.25° spatial resolution</strong>, generated using <strong>Deep Forest machine learning models</strong>. It integrates <strong>satellite-based vegetation proxies </strong>— including MODIS NIRv, GOME-2 SIF, and OCO-2 SIF — with <strong>ERA5 climate reanalysis</strong>, and is trained against <strong>ICOS eddy covariance observations</strong>. The dataset includes five core flux components:</p> <ul> <li> <p>Gross Primary Production (<strong>GPP</strong>)</p> </li> <li> <p>Ecosystem Respiration (<strong>RECO</strong>)</p> </li> <li> <p>Net Ecosystem Exchange (<strong>NEE</strong>)</p> </li> <li> <p>Sensible Heat Flux (<strong>H</strong>)</p> </li> <li> <p>Latent Energy Flux (<strong>LE</strong>)</p> </li> </ul> <p><strong>Background and Methodology</strong><br>The <strong>Unified FLUXes (UFLUX)</strong> initiative is a data-driven, machine learning-based platform designed to upscale eddy covariance (EC) flux measurements from tower sites to the global scale. It aims to answer pressing questions about how effectively terrestrial ecosystems are managed under climate change.</p> <p>Key innovations of UFLUX include:</p> <ol> <li> <p><strong>Consistent Upscaling Framework</strong>: Harmonizes flux upscaling across spatial/temporal scales and multiple flux types (GPP, RECO, etc.) using deep decision tree-based methods, better suited than conventional neural networks for EC flux data.</p> </li> <li> <p><strong>Hybrid Explainable ML</strong>: Combines black-box ML with ecological interpretability through residual learning, offering both predictive power and new scientific insight (UFLUXv2).</p> </li> <li> <p><strong>Uncertainty Quantification</strong>: Employs sampling space completeness to assess model uncertainty in a transparent, robust manner.</p> </li> <li> <p><strong>Multisource Integration</strong>: Leverages complementary strengths of vegetation proxies (e.g., NIRv, SIF) and climate data (e.g., ERA5) to represent carbon dynamics more comprehensively than single-source approaches.</p> </li> <li> <p><strong>Superior Gap-Filling</strong>: Originally developed as a global EC flux gap-filling tool, UFLUX improves accuracy by up to 30% and reduces uncertainty by as much as 70% compared to traditional methods.</p> </li> <li> <p><strong>High Performance</strong>: Achieves strong predictive accuracy, with global-scale R² > 0.8 for RECO and ≈0.9 for GPP, while being computationally efficient enough to run on a standard laptop.</p> </li> <li> <p><strong>Community Adoption</strong>: Already used by other global upscaling projects, highlighting its reliability and impact.</p> </li> </ol> <p><strong>Applications</strong><br>UFLUX is ideal for studying the interactions between land management, climate change, and carbon fluxes, particularly in improving global estimates of GPP and RECO by addressing biases in EC measurements.</p> <p><strong>Resources</strong></p> <ul> <li><strong>UFLUX Website: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://sites.google.com/view/uflux</a></strong></li> <li> <p><strong>Code Repository</strong>: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://github.com/soonyenju/uflux</a></p> </li> <li> <p><strong>Technical & Descriptive Publication</strong>: <a href="https://doi.org/10.1080/01431161.2024.2312266" target="_new" rel="noopener">https://doi.org/10.1080/01431161.2024.2312266</a></p> </li> </ul>
UFLUX global ensemble 0.25deg monthly carbon, water, and energy fluxes from 2001 - 2021
<p> </p> <h3>UFLUX Ensemble Globe025dmonthly (Global 0.25° Monthly, 13 Members)</h3> <p><strong>Overview</strong><br>The <strong>UFLUX ensemble dataset</strong> provides <strong>global monthly fluxes at 0.25° spatial resolution</strong>, incorporating <strong>13 ensemble members</strong> derived from different combinations of satellite-based vegetation proxies and climate reanalysis data. The dataset includes five key ecosystem flux components:</p> <ul> <li> <p>Gross Primary Production (<strong>GPP</strong>)</p> </li> <li> <p>Ecosystem Respiration (<strong>RECO</strong>)</p> </li> <li> <p>Net Ecosystem Exchange (<strong>NEE</strong>)</p> </li> <li> <p>Sensible Heat Flux (<strong>H</strong>)</p> </li> <li> <p>Latent Energy Flux (<strong>LE</strong>)</p> </li> </ul> <p><strong>Ensemble Members:</strong><br>Each member combines unique satellite vegetation indices with climate datasets:</p> <ol> <li> <p>MODIS-NIRv-CFSV2</p> </li> <li> <p>MODIS-NIRv-ERA5</p> </li> <li> <p>OCO-2-CSIF-ERA5</p> </li> <li> <p>GOME-2-SIF-ERA5</p> </li> <li> <p>GOSAT-755-SIF-ERA5</p> </li> <li> <p>GOSAT-772-SIF-ERA5</p> </li> <li> <p>MODIS-NDVI-ERA5</p> </li> <li> <p>MODIS-EVI2-ERA5</p> </li> <li> <p>AVHRR-NIRv-ERA5</p> </li> <li> <p>AVHRR-NDVI-ERA5</p> </li> <li> <p>AVHRR-EVI2-ERA5</p> </li> <li> <p>MODIS-NIRv-ERA5-WY</p> </li> <li> <p>MODIS-NIRv-ERA5-NT</p> </li> </ol> <p><strong>Background and Methodology</strong><br>The <strong>Unified FLUXes (UFLUX)</strong> initiative is a data-driven, machine learning-based platform designed to upscale eddy covariance (EC) flux measurements from tower sites to the global scale. It aims to answer pressing questions about how effectively terrestrial ecosystems are managed under climate change.</p> <p>Key innovations of UFLUX include:</p> <ol> <li> <p><strong>Consistent Upscaling Framework</strong>: Harmonizes flux upscaling across spatial/temporal scales and multiple flux types (GPP, RECO, etc.) using deep decision tree-based methods, better suited than conventional neural networks for EC flux data.</p> </li> <li> <p><strong>Hybrid Explainable ML</strong>: Combines black-box ML with ecological interpretability through residual learning, offering both predictive power and new scientific insight (UFLUXv2).</p> </li> <li> <p><strong>Uncertainty Quantification</strong>: Employs sampling space completeness to assess model uncertainty in a transparent, robust manner.</p> </li> <li> <p><strong>Multisource Integration</strong>: Leverages complementary strengths of vegetation proxies (e.g., NIRv, SIF) and climate data (e.g., ERA5) to represent carbon dynamics more comprehensively than single-source approaches.</p> </li> <li> <p><strong>Superior Gap-Filling</strong>: Originally developed as a global EC flux gap-filling tool, UFLUX improves accuracy by up to 30% and reduces uncertainty by as much as 70% compared to traditional methods.</p> </li> <li> <p><strong>High Performance</strong>: Achieves strong predictive accuracy, with global-scale R² > 0.8 for RECO and ≈0.9 for GPP, while being computationally efficient enough to run on a standard laptop.</p> </li> <li> <p><strong>Community Adoption</strong>: Already used by other global upscaling projects, highlighting its reliability and impact.</p> </li> </ol> <p><strong>Applications</strong><br>UFLUX is ideal for studying the interactions between land management, climate change, and carbon fluxes, particularly in improving global estimates of GPP and RECO by addressing biases in EC measurements.</p> <p><strong>Resources</strong></p> <ul> <li><strong>UFLUX Website: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://sites.google.com/view/uflux</a></strong></li> <li> <p><strong>Code Repository</strong>: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://github.com/soonyenju/uflux</a></p> </li> <li> <p><strong>Technical & Descriptive Publication</strong>: <a href="https://doi.org/10.1080/01431161.2024.2312266" target="_new" rel="noopener">https://doi.org/10.1080/01431161.2024.2312266</a></p> </li> </ul>
Coastal Upwelling Modulates Winds and Air-Sea Fluxes, Impacting Offshore Wind Energy
<p>Model Output supporting the paper "Coastal Upwelling Modulates Winds and Air-Sea Fluxes, Impacting Offshore Wind Energy"</p> <p>The dataset includes four WRF runs, with upwelling (labeled 'operational') and with upwelling removed (labeled 'experimental'). Two of the runs have parameterized wind turbines, labeled "Fitch". </p> <p>This work was supported by NJ Board of Public Utilities. </p> <p> </p>
Energy-Dependent, Self-Adaptive Mesh h(p)-Refinement of a Constraint-Based Continuous Bubnov-Galerkin Isogeometric Analysis Spatial Discretisation of the Self-Adjoint Angular Flux Form of the Multi-Group Neutron Transport Equation with Dual-Weighted Residual Error Measures
<p>This repository holds all of the raw data generated by my (Modern) Fortran code for a paper "Energy-Dependent, Self-Adaptive Mesh h(p)-Refinement of a Constraint-Based Continuous Bubnov-Galerkin Isogeometric Analysis Spatial Discretisation of the Self-Adjoint Angular Flux Form of the Multi-Group Neutron Transport Equation with Dual-Weighted Residual Error Measures".</p> <p>The (Modern) Fortran code solves the SAAF form of the multi-group neutron transport equation using novel NURBS-based, IGA spatial discretisations.</p>
Water and energy fluxes measurements over a riparian Tamarix spp. stand in the lower Tarim River basin, northwestern China
<p>This dataset includes water and energy fluxes measurements over a riparian <em>Tamarix spp.</em> stand in the lower Tarim River basin, northwestern China. Details of field site and measurements can be found in the paper: Yuan, G., P. Zhang, M.-a. Shao, Y. Luo, and X. Zhu (2014), Energy and water exchanges over a riparian Tamarix spp. stand in the lower Tarim River basin under a hyper-arid climate, Agricultural and Forest Meteorology, 194(0), 144-154.</p> <p>This dataset also accompanies the published paper in the Water Resources Research: Implementing Dynamic Root Optimization in Noah‐MP for Simulating Phreatophytic Root Water Uptake. Water Resources Research 54(3), 1560-1575. With this dataset, we tested the Noah-MP land surface model with implementation of a soil moisture-responsive root dynamics scheme (VOM-ROOT). </p>
Greenhouse gas and energy fluxes in a boreal peatland forest after clearcutting
<p>This package contains the data used in the research article: "Greenhouse gas and energy fluxes in a boreal peatland forest after clearcutting" published in Biogeosciences journal.</p> <p>Changes in this version:</p> <p>Chamber_data.xlsx is now named Chamber_data_clearcut.xlsx. CO2 fluxes were also corrected.</p> <p>Added daily mean CO2, CH4 and N2O fluxes measured at the control site.</p> <p> </p> <p>Chamber_data_clearcut.xlsx contains the daily mean fluxes of CO2, CH4 and N2O measured with soil chambers at the clearcut site.</p> <p>Chamber_data_control.xlsx contains the daily mean fluxes of CO2, CH4 and N2O measured with soil chambers at the control site.</p> <p>EC_CO2_fluxes.xlsx contains the gapfilled 30-min mean CO2 fluxes (NEE) and its components (GPP and respiration).</p> <p>Energy_fluxes.xlsx contains the gapfilled hourly mean energy fluxes.</p> <p>Meteo_data.xlsx contains the daily means of the meteorological variables used in the study.</p>
Results of linear ocean model experiment for: Dual wave energy sources for the Atlantic Niño events identified by wave energy flux in case studies
<p>These are sensitivity experiments designed by manipulating the wind forcing that drives the linear ocean model to investigate the difference in equatorial waves in 1999, 2019, and 2021. </p>
UFLUX 100m half-yearly carbon, water, and energy fluxes in Europe in 2017
<div> <h3>UFLUX Ensemble Europe100m6monthly (European 100 6-monthly) in 2017</h3> <p><strong>Overview</strong><br>The <strong>UFLUX ensemble dataset</strong> offers <strong>European fluxes at 100 m spatial resolution</strong>, generated using <strong>Deep Forest machine learning models</strong>. It integrates <strong>satellite-based Sentinel-2 vegetation proxies NIRv</strong> with <strong>ERA5 climate reanalysis</strong>, and is trained against <strong>ICOS eddy covariance observations</strong>. The UFLUX project includes five core flux components:</p> <ul> <li> <p>Gross Primary Production (<strong>GPP</strong>)</p> </li> <li> <p>Ecosystem Respiration (<strong>RECO</strong>)</p> </li> <li> <p>Net Ecosystem Exchange (<strong>NEE</strong>)</p> </li> <li> <p>Sensible Heat Flux (<strong>H</strong>)</p> </li> <li> <p>Latent Energy Flux (<strong>LE</strong>)</p> </li> </ul> <p><strong>Background and Methodology</strong><br>The <strong>Unified FLUXes (UFLUX)</strong> initiative is a data-driven, machine learning-based platform designed to upscale eddy covariance (EC) flux measurements from tower sites to the global scale. It aims to answer pressing questions about how effectively terrestrial ecosystems are managed under climate change.</p> <p>Key innovations of UFLUX include:</p> <ol> <li> <p><strong>Consistent Upscaling Framework</strong>: Harmonizes flux upscaling across spatial/temporal scales and multiple flux types (GPP, RECO, etc.) using deep decision tree-based methods, better suited than conventional neural networks for EC flux data.</p> </li> <li> <p><strong>Hybrid Explainable ML</strong>: Combines black-box ML with ecological interpretability through residual learning, offering both predictive power and new scientific insight (UFLUXv2).</p> </li> <li> <p><strong>Uncertainty Quantification</strong>: Employs sampling space completeness to assess model uncertainty in a transparent, robust manner.</p> </li> <li> <p><strong>Multisource Integration</strong>: Leverages complementary strengths of vegetation proxies (e.g., NIRv, SIF) and climate data (e.g., ERA5) to represent carbon dynamics more comprehensively than single-source approaches.</p> </li> <li> <p><strong>Superior Gap-Filling</strong>: Originally developed as a global EC flux gap-filling tool, UFLUX improves accuracy by up to 30% and reduces uncertainty by as much as 70% compared to traditional methods.</p> </li> <li> <p><strong>High Performance</strong>: Achieves strong predictive accuracy, with global-scale R² > 0.8 for RECO and ≈0.9 for GPP, while being computationally efficient enough to run on a standard laptop.</p> </li> <li> <p><strong>Community Adoption</strong>: Already used by other global upscaling projects, highlighting its reliability and impact.</p> </li> </ol> <p><strong>Applications</strong><br>UFLUX is ideal for studying the interactions between land management, climate change, and carbon fluxes, particularly in improving global estimates of GPP and RECO by addressing biases in EC measurements.</p> <p><strong>Resources</strong></p> <ul> <li><strong>UFLUX Website: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://sites.google.com/view/uflux</a></strong></li> <li> <p><strong>Code Repository</strong>: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://github.com/soonyenju/uflux</a></p> </li> <li> <p><strong>Technical & Descriptive Publication</strong>: <a href="https://doi.org/10.1080/01431161.2024.2312266" target="_new" rel="noopener">https://doi.org/10.1080/01431161.2024.2312266</a></p> </li> </ul> </div>
Data from: Seasonal variations in planktonic food web structure affect stability by shifting the distribution of energy fluxes
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Data from: Herbivore species and patch heterogeneity modulate grazing-induced shifts in soil nematode trophic structure and energy flux
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Data in: Reduced predation and energy flux in soil food webs by introduced tree species
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Results of linear ocean model experiment for: Dual wave energy sources for the Atlantic Niño events identified by wave energy flux in case studies
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Water, energy and carbon fluxes and ancillary meteorological measurements of four different urban landscapes in Phoenix, AZ during 2015
<p>Water, energy and carbon fluxes and ancillary meteorological measurements of four different urban landscapes in Phoenix, AZ during 2015. The measurements were done in three temporal not continuous deployment and in a permanent site as a reference. The urban landscape sites consisted in:</p> <ul> <li>A xeric landscape (XL), with measurements from 01/20/2015 to 03/13/2015.</li> <li>A parking lot (PL), with measurements from 05/19/2015 to 06/30/2015.</li> <li>A mesic landscape (ML), with measurements from 07/08/2015 to 09/18/2015.</li> <li>A reference suburban neighbourhood (REF), with measurements from 01/01/2015 to 12/13/2015.</li> </ul> <p>Water energy and carbon fluxes were processed using the software EdiRe. If additional data or information is needed, please contact the authors.</p> <p>The use of the datasets requires the citation of the next papers:</p> <p>- Templeton, N.P., Vivoni, E.R., Wang, Z-H., and Schreiner-McGraw, A.P. 2018. Quantifying Water and Energy Fluxes over Different Urban Land Covers in Phoenix, Arizona. Journal of Geophysical Research - Atmospheres. 123(4): 2111-2128.</p> <p>-Pérez-Ruiz, E. R., Vivoni, E. R. and Templeton, N. P. 2020. Urban land cover type determines the sensitivity of carbon dioxide fluxes to precipitation in Phoenix, Arizona. PLoS ONE 15(2): e0228537. https://doi.org/10.1371/journal.pone.0228537</p>
Simulation output from "Multiscale MHD-Kinetic PIC Study of Energy Flux Caused by Reconnection"
<p>Results from an implicit particle-in-cell simulation (IPIC3D) of the energy fluxes from magnetic reconnection in Earth's magnetotail. The results consist of six files in HDF5 format that contain the electric field, magnetic field, the density, velocity and energy flux. Each file contains one time step. </p> <p>The IPIC3D simulation is described in</p> <p>Markidis, S., Lapenta, G. and Rizwan-uddin (2010) Multi-scale simulations of plasma with IPIC3D . Mathematics and Computers and Simulation, 80, 1509-1519.</p> <p>The energy conserving version of IPIC3D used in this study is described in</p> <p>Lapenta, G., (2017) Exactly energy conserving semi-implicit particle in cell formulation, J. Computational Physics, 334, 349-366.</p> <p>The application of IPIC3D to Earth's magnetosphere is described in </p> <p>Walker, R., Lapenta, G., Berchem, J., El-Alaoui, M., and Schriver, D., (2019) Embedding particle-in-cell simulations in global magnetohydrodynamic simulations of the magnetosphere, Journal of Plasma Physics, 85(1). </p>
Data from: Linking size spectrum, energy flux and trophic multifunctionality in soil food webs of tropical land-use systems
1. Many ecosystem functions depend on the structure of food webs, which heavily relies on the body size spectrum of the community. Despite that, little is known on how the size spectrum of soil animals responds to agricultural practices in tropical land-use systems and how these responses affect ecosystem functioning. 2. We studied land-use induced changes in belowground communities in tropical lowland ecosystems in Sumatra (Jambi province, Indonesia), a hotspot of tropical rainforest conversion to rubber and oil palm plantations. The study included ca. 30,000 measured individuals from 33 high-order taxa of meso- and macrofauna spanning eight orders of magnitude in body mass. Using individual body masses we calculated the metabolism of trophic guilds and used food-web models to calculate energy fluxes and infer ecosystem functions, such as decomposition, herbivory, primary and intraguild predation. 3. Land-use change was associated with reduced abundance and taxonomic diversity of soil invertebrates, but strong increase in total biomass and moderate changes in total energy flux. These changes were due to increased biomass of large-sized decomposers in soil, in particular earthworms, with their share in community metabolism increasing from 11% in rainforest to 59-76% in jungle rubber, and rubber and oil palm plantations. Decomposition, i.e. the energy flux to decomposers, stayed unchanged, but herbivory, primary and intraguild predation decreased by an order of magnitude in plantation systems. Intraguild predation was very important, being responsible for 38% of the energy flux in rainforest according to our model. 4. Conversion of rainforest into monoculture plantations is associated by an uneven loss of size classes and trophic levels of soil invertebrates resulting in sequestration of energy in large-sized primary consumers and restricted flux of energy to higher trophic levels. Pronounced differences between rainforest and jungle rubber reflect sensitivity of rainforest soil animal communities to moderate land-use changes. Soil communities in plantation systems sustained high total energy flux despite reduced biodiversity. The high energy flux into large decomposers but low energy fluxes to other trophic guilds suggests that trophic multifunctionality of belowground communities is compromised in plantation systems.
UFLUX 100m half-yearly carbon, water, and energy fluxes in Europe in 2019
<div> <div> <h3>UFLUX Ensemble Europe100m6monthly (European 100 6-monthly) in 2019</h3> <p><strong>Overview</strong><br>The <strong>UFLUX ensemble dataset</strong> offers <strong>European fluxes at 100 m spatial resolution</strong>, generated using <strong>Deep Forest machine learning models</strong>. It integrates <strong>satellite-based Sentinel-2 vegetation proxies NIRv</strong> with <strong>ERA5 climate reanalysis</strong>, and is trained against <strong>ICOS eddy covariance observations</strong>. The UFLUX project includes five core flux components:</p> <ul> <li> <p>Gross Primary Production (<strong>GPP</strong>)</p> </li> <li> <p>Ecosystem Respiration (<strong>RECO</strong>)</p> </li> <li> <p>Net Ecosystem Exchange (<strong>NEE</strong>)</p> </li> <li> <p>Sensible Heat Flux (<strong>H</strong>)</p> </li> <li> <p>Latent Energy Flux (<strong>LE</strong>)</p> </li> </ul> <p><strong>Background and Methodology</strong><br>The <strong>Unified FLUXes (UFLUX)</strong> initiative is a data-driven, machine learning-based platform designed to upscale eddy covariance (EC) flux measurements from tower sites to the global scale. It aims to answer pressing questions about how effectively terrestrial ecosystems are managed under climate change.</p> <p>Key innovations of UFLUX include:</p> <ol> <li> <p><strong>Consistent Upscaling Framework</strong>: Harmonizes flux upscaling across spatial/temporal scales and multiple flux types (GPP, RECO, etc.) using deep decision tree-based methods, better suited than conventional neural networks for EC flux data.</p> </li> <li> <p><strong>Hybrid Explainable ML</strong>: Combines black-box ML with ecological interpretability through residual learning, offering both predictive power and new scientific insight (UFLUXv2).</p> </li> <li> <p><strong>Uncertainty Quantification</strong>: Employs sampling space completeness to assess model uncertainty in a transparent, robust manner.</p> </li> <li> <p><strong>Multisource Integration</strong>: Leverages complementary strengths of vegetation proxies (e.g., NIRv, SIF) and climate data (e.g., ERA5) to represent carbon dynamics more comprehensively than single-source approaches.</p> </li> <li> <p><strong>Superior Gap-Filling</strong>: Originally developed as a global EC flux gap-filling tool, UFLUX improves accuracy by up to 30% and reduces uncertainty by as much as 70% compared to traditional methods.</p> </li> <li> <p><strong>High Performance</strong>: Achieves strong predictive accuracy, with global-scale R² > 0.8 for RECO and ≈0.9 for GPP, while being computationally efficient enough to run on a standard laptop.</p> </li> <li> <p><strong>Community Adoption</strong>: Already used by other global upscaling projects, highlighting its reliability and impact.</p> </li> </ol> <p><strong>Applications</strong><br>UFLUX is ideal for studying the interactions between land management, climate change, and carbon fluxes, particularly in improving global estimates of GPP and RECO by addressing biases in EC measurements.</p> <p><strong>Resources</strong></p> <ul> <li><strong>UFLUX Website: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://sites.google.com/view/uflux</a></strong></li> <li> <p><strong>Code Repository</strong>: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://github.com/soonyenju/uflux</a></p> </li> <li> <p><strong>Technical & Descriptive Publication</strong>: <a href="https://doi.org/10.1080/01431161.2024.2312266" target="_new" rel="noopener">https://doi.org/10.1080/01431161.2024.2312266</a></p> </li> </ul> </div> </div>
UFLUX 100m half-yearly carbon, water, and energy fluxes in Europe in 2020
<div> <div> <div> <h3>UFLUX Ensemble Europe100m6monthly (European 100 6-monthly) in 2020</h3> <p><strong>Overview</strong><br>The <strong>UFLUX ensemble dataset</strong> offers <strong>European fluxes at 100 m spatial resolution</strong>, generated using <strong>Deep Forest machine learning models</strong>. It integrates <strong>satellite-based Sentinel-2 vegetation proxies NIRv</strong> with <strong>ERA5 climate reanalysis</strong>, and is trained against <strong>ICOS eddy covariance observations</strong>. The UFLUX project includes five core flux components:</p> <ul> <li> <p>Gross Primary Production (<strong>GPP</strong>)</p> </li> <li> <p>Ecosystem Respiration (<strong>RECO</strong>)</p> </li> <li> <p>Net Ecosystem Exchange (<strong>NEE</strong>)</p> </li> <li> <p>Sensible Heat Flux (<strong>H</strong>)</p> </li> <li> <p>Latent Energy Flux (<strong>LE</strong>)</p> </li> </ul> <p><strong>Background and Methodology</strong><br>The <strong>Unified FLUXes (UFLUX)</strong> initiative is a data-driven, machine learning-based platform designed to upscale eddy covariance (EC) flux measurements from tower sites to the global scale. It aims to answer pressing questions about how effectively terrestrial ecosystems are managed under climate change.</p> <p>Key innovations of UFLUX include:</p> <ol> <li> <p><strong>Consistent Upscaling Framework</strong>: Harmonizes flux upscaling across spatial/temporal scales and multiple flux types (GPP, RECO, etc.) using deep decision tree-based methods, better suited than conventional neural networks for EC flux data.</p> </li> <li> <p><strong>Hybrid Explainable ML</strong>: Combines black-box ML with ecological interpretability through residual learning, offering both predictive power and new scientific insight (UFLUXv2).</p> </li> <li> <p><strong>Uncertainty Quantification</strong>: Employs sampling space completeness to assess model uncertainty in a transparent, robust manner.</p> </li> <li> <p><strong>Multisource Integration</strong>: Leverages complementary strengths of vegetation proxies (e.g., NIRv, SIF) and climate data (e.g., ERA5) to represent carbon dynamics more comprehensively than single-source approaches.</p> </li> <li> <p><strong>Superior Gap-Filling</strong>: Originally developed as a global EC flux gap-filling tool, UFLUX improves accuracy by up to 30% and reduces uncertainty by as much as 70% compared to traditional methods.</p> </li> <li> <p><strong>High Performance</strong>: Achieves strong predictive accuracy, with global-scale R² > 0.8 for RECO and ≈0.9 for GPP, while being computationally efficient enough to run on a standard laptop.</p> </li> <li> <p><strong>Community Adoption</strong>: Already used by other global upscaling projects, highlighting its reliability and impact.</p> </li> </ol> <p><strong>Applications</strong><br>UFLUX is ideal for studying the interactions between land management, climate change, and carbon fluxes, particularly in improving global estimates of GPP and RECO by addressing biases in EC measurements.</p> <p><strong>Resources</strong></p> <ul> <li><strong>UFLUX Website: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://sites.google.com/view/uflux</a></strong></li> <li> <p><strong>Code Repository</strong>: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://github.com/soonyenju/uflux</a></p> </li> <li> <p><strong>Technical & Descriptive Publication</strong>: <a href="https://doi.org/10.1080/01431161.2024.2312266" target="_new" rel="noopener">https://doi.org/10.1080/01431161.2024.2312266</a></p> </li> </ul> </div> </div> </div>
UFLUX 100m half-yearly carbon, water, and energy fluxes in Europe in 2021
<div> <div> <div> <div> <h3>UFLUX Ensemble Europe100m6monthly (European 100 6-monthly) in 2021</h3> <p><strong>Overview</strong><br>The <strong>UFLUX ensemble dataset</strong> offers <strong>European fluxes at 100 m spatial resolution</strong>, generated using <strong>Deep Forest machine learning models</strong>. It integrates <strong>satellite-based Sentinel-2 vegetation proxies NIRv</strong> with <strong>ERA5 climate reanalysis</strong>, and is trained against <strong>ICOS eddy covariance observations</strong>. The UFLUX project includes five core flux components:</p> <ul> <li> <p>Gross Primary Production (<strong>GPP</strong>)</p> </li> <li> <p>Ecosystem Respiration (<strong>RECO</strong>)</p> </li> <li> <p>Net Ecosystem Exchange (<strong>NEE</strong>)</p> </li> <li> <p>Sensible Heat Flux (<strong>H</strong>)</p> </li> <li> <p>Latent Energy Flux (<strong>LE</strong>)</p> </li> </ul> <p><strong>Background and Methodology</strong><br>The <strong>Unified FLUXes (UFLUX)</strong> initiative is a data-driven, machine learning-based platform designed to upscale eddy covariance (EC) flux measurements from tower sites to the global scale. It aims to answer pressing questions about how effectively terrestrial ecosystems are managed under climate change.</p> <p>Key innovations of UFLUX include:</p> <ol> <li> <p><strong>Consistent Upscaling Framework</strong>: Harmonizes flux upscaling across spatial/temporal scales and multiple flux types (GPP, RECO, etc.) using deep decision tree-based methods, better suited than conventional neural networks for EC flux data.</p> </li> <li> <p><strong>Hybrid Explainable ML</strong>: Combines black-box ML with ecological interpretability through residual learning, offering both predictive power and new scientific insight (UFLUXv2).</p> </li> <li> <p><strong>Uncertainty Quantification</strong>: Employs sampling space completeness to assess model uncertainty in a transparent, robust manner.</p> </li> <li> <p><strong>Multisource Integration</strong>: Leverages complementary strengths of vegetation proxies (e.g., NIRv, SIF) and climate data (e.g., ERA5) to represent carbon dynamics more comprehensively than single-source approaches.</p> </li> <li> <p><strong>Superior Gap-Filling</strong>: Originally developed as a global EC flux gap-filling tool, UFLUX improves accuracy by up to 30% and reduces uncertainty by as much as 70% compared to traditional methods.</p> </li> <li> <p><strong>High Performance</strong>: Achieves strong predictive accuracy, with global-scale R² > 0.8 for RECO and ≈0.9 for GPP, while being computationally efficient enough to run on a standard laptop.</p> </li> <li> <p><strong>Community Adoption</strong>: Already used by other global upscaling projects, highlighting its reliability and impact.</p> </li> </ol> <p><strong>Applications</strong><br>UFLUX is ideal for studying the interactions between land management, climate change, and carbon fluxes, particularly in improving global estimates of GPP and RECO by addressing biases in EC measurements.</p> <p><strong>Resources</strong></p> <ul> <li><strong>UFLUX Website: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://sites.google.com/view/uflux</a></strong></li> <li> <p><strong>Code Repository</strong>: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://github.com/soonyenju/uflux</a></p> </li> <li> <p><strong>Technical & Descriptive Publication</strong>: <a href="https://doi.org/10.1080/01431161.2024.2312266" target="_new" rel="noopener">https://doi.org/10.1080/01431161.2024.2312266</a></p> </li> </ul> </div> </div> </div> </div>
UFLUX 100m half-yearly carbon, water, and energy fluxes in Europe in 2022
<div> <div> <div> <div> <h3>UFLUX Ensemble Europe100m6monthly (European 100 6-monthly) in 2022</h3> <p><strong>Overview</strong><br>The <strong>UFLUX ensemble dataset</strong> offers <strong>European fluxes at 100 m spatial resolution</strong>, generated using <strong>Deep Forest machine learning models</strong>. It integrates <strong>satellite-based Sentinel-2 vegetation proxies NIRv</strong> with <strong>ERA5 climate reanalysis</strong>, and is trained against <strong>ICOS eddy covariance observations</strong>. The UFLUX project includes five core flux components:</p> <ul> <li> <p>Gross Primary Production (<strong>GPP</strong>)</p> </li> <li> <p>Ecosystem Respiration (<strong>RECO</strong>)</p> </li> <li> <p>Net Ecosystem Exchange (<strong>NEE</strong>)</p> </li> <li> <p>Sensible Heat Flux (<strong>H</strong>)</p> </li> <li> <p>Latent Energy Flux (<strong>LE</strong>)</p> </li> </ul> <p><strong>Background and Methodology</strong><br>The <strong>Unified FLUXes (UFLUX)</strong> initiative is a data-driven, machine learning-based platform designed to upscale eddy covariance (EC) flux measurements from tower sites to the global scale. It aims to answer pressing questions about how effectively terrestrial ecosystems are managed under climate change.</p> <p>Key innovations of UFLUX include:</p> <ol> <li> <p><strong>Consistent Upscaling Framework</strong>: Harmonizes flux upscaling across spatial/temporal scales and multiple flux types (GPP, RECO, etc.) using deep decision tree-based methods, better suited than conventional neural networks for EC flux data.</p> </li> <li> <p><strong>Hybrid Explainable ML</strong>: Combines black-box ML with ecological interpretability through residual learning, offering both predictive power and new scientific insight (UFLUXv2).</p> </li> <li> <p><strong>Uncertainty Quantification</strong>: Employs sampling space completeness to assess model uncertainty in a transparent, robust manner.</p> </li> <li> <p><strong>Multisource Integration</strong>: Leverages complementary strengths of vegetation proxies (e.g., NIRv, SIF) and climate data (e.g., ERA5) to represent carbon dynamics more comprehensively than single-source approaches.</p> </li> <li> <p><strong>Superior Gap-Filling</strong>: Originally developed as a global EC flux gap-filling tool, UFLUX improves accuracy by up to 30% and reduces uncertainty by as much as 70% compared to traditional methods.</p> </li> <li> <p><strong>High Performance</strong>: Achieves strong predictive accuracy, with global-scale R² > 0.8 for RECO and ≈0.9 for GPP, while being computationally efficient enough to run on a standard laptop.</p> </li> <li> <p><strong>Community Adoption</strong>: Already used by other global upscaling projects, highlighting its reliability and impact.</p> </li> </ol> <p><strong>Applications</strong><br>UFLUX is ideal for studying the interactions between land management, climate change, and carbon fluxes, particularly in improving global estimates of GPP and RECO by addressing biases in EC measurements.</p> <p><strong>Resources</strong></p> <ul> <li><strong>UFLUX Website: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://sites.google.com/view/uflux</a></strong></li> <li> <p><strong>Code Repository</strong>: <a href="https://github.com/soonyenju/uflux" target="_new" rel="noopener">https://github.com/soonyenju/uflux</a></p> </li> <li> <p><strong>Technical & Descriptive Publication</strong>: <a href="https://doi.org/10.1080/01431161.2024.2312266" target="_new" rel="noopener">https://doi.org/10.1080/01431161.2024.2312266</a></p> </li> </ul> </div> </div> </div> </div>
Disentangling Sources of Uncertainty in CLM5 Model Predictions: Water, Energy, and Carbon Fluxes at European Observation Sites
<p>The datasets include:</p> <ul> <li>EC data from Europement measurement sites in <a href="https://www.icos-cp.eu/data-products/2G60-ZHAK">ICOS</a>, <a href="https://fluxnet.org/login/?redirect_to=/data/download-data/">FLUXNETS</a>, and <a href="https://doi.org/10.34731/x9s3-Kr48">COSMOS-Europe</a>.</li> <li>Ensemble simulation data used for analysis</li> </ul> <p>The atmospheric forcings used in driving the model were all local measurements pre-processed using the script in GitHub repository <a href="https://github.com/FedoAIworld/CLM5-Disentangling-Uncertainty/tree/main/00_create_forcing_ds">CLM5-Disentangling-Uncertainty</a>.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.