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118 results for “environmental determinism”

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dryad36/100

Genome-wide DNA methylation patterns harbor signatures of hatchling sex and past incubation temperature in a species with environmental sex determination

Conservation of thermally sensitive species depends on monitoring organismal and population-level responses to environmental change in real time. Epigenetic processes are increasingly recognized as key integrators of environmental conditions into developmentally plastic responses, and attendant epigenomic datasets hold potential for revealing cryptic phenotypes relevant to conservation efforts. Here, we demonstrate the utility of genome-wide DNA methylation (DNAm) patterns in the face of climate change for a group of especially vulnerable species, those with temperature-dependent sex determination (TSD). Due to their reliance on thermal cues during development to determine sexual fate, contemporary shifts in temperature are predicted to skew offspring sex ratios and ultimately destabilize sensitive populations. Using reduced-representation bisulfite sequencing, we profiled the DNA methylome in blood cells of hatchling American alligator (Alligator mississippiensis), a TSD species lacking reliable markers of sexual dimorphism in early life-stages. We identified 120 sex-associated differentially methylated cytosines (DMCs; FDR < 0.1) in hatchlings incubated under a range of temperatures, as well as 707 unique temperature-associated DMCs. We further developed DNAm-based models capable of predicting hatchling sex with 100% accuracy (in 20 training samples and 4 test samples) and past incubation temperature with a mean absolute error of 1.2˚C (in 4 test samples) based on the methylation status of 20 and 24 loci, respectively. Though largely independent of epigenomic patterning occurring in the embryonic gonad during TSD, DNAm patterns in blood cells may serve as non-lethal markers of hatchling sex and past incubation conditions in conservation applications. These findings also raise intriguing questions regarding tissue-specific epigenomic patterning in the context of developmental plasticity.

opencc-zeroAug 2022View details →

dryad36/100

Simultaneous determination method of 10 organophosphate esters in oyster, an environmental indicator organism

Oyster is a common indicator organism of environment pollution. A method was built to simultaneously determine ten common commercial organophosphate ester flame retardants in oysters. After the careful optimization of conditions, the organophosphate esters (OPEs) in oyster sample were extracted with hexane assisted by ultrasound, purified with NH2 solid-phase extraction column, eluted with the mixture solution of dichloromethane and ethyl acetate at the ratio of 1:1 (v/v), and finally detected by gas chromatography coupled with tandem triple quadrupole mass spectrometry (GC–MS/MS). All the ten compounds in the concentrations ranging from 0.5 ng·mL-1 to 100 ng·mL-1 showed good linearity with their R2 higher than 0.9991. The limits of detection and limits of quantification for the organophosphate esters were from 0.03 ng·g-1 to 0.47 ng·g-1 (dry weight) and from 0.1 ng·g-1 to 1.56 ng·g-1 (dry weight), respectively. At the three spiking levels with five replicates, recoveries of organophosphate esters ranged from 82% to 108% with the relative standard deviation ranging from 0.9% to 6.4%. In the samples collected from mariculture farms, nine OPE compounds were detected in oysters with the concentration ranging from 6.52 ng·g-1 to 22 ng·g-1 (dry weight). It indicated the method was suitable for OPEs determination in oysters.

opencc-zeroOct 2022View details →

dryad36/100

Environmental range per unit space determines a unimodal pattern of species richness along a heterogeneity gradient

Although many studies have focused on the effects of the environment and area on local patterns of species richness, few studies have demonstrated how to reconcile the availability of more niches with smaller habitat areas in heterogeneous localities. Here, the environmental range that a species prefers was defined as a niche; a space was defined as an available space if the environmental range of the space matches a niche; and the metric "environmental range per unit space (ERUS)" was presented to describe the heterogeneity of localities. Because the spaces with stressful environmental ranges, outside the niche, increased with increasing heterogeneity, available spaces did not continue to indefinitely increase, but the proportion of available spaces in spaces was low at high heterogeneous localities. Consequently, the probability of species occurring in their respective available spaces was unimodal. Due to the presence of large spaces in homogenous localities and more spaces in heterogeneous localities, the interval distances between nonadjacent spaces were large in these localities. Together, the changes in the number and proportion of available spaces and distance between spaces determined the unimodal probability of species dispersing into their respective available spaces. Thus, the probability of species coexisting was unimodal because it is important for coexisting species to grow in their respective available spaces. The probability of population extinction increased with increasing heterogeneity because the available spaces became narrower. In this way, the ERUS strongly influence species richness: a unimodal richness along the heterogeneity gradient occurred in suitable, suboptimal and stressful environments, and a unimodal algae richness occurred in a lake and river. These results challenge the viewpoint that richness increases with heterogeneity, providing information about the conservation of richness in very homogeneous and heterogeneous regions, and highlighting the importance of balancing the roles of environment and space in understanding and predicting richness.

opencc-zeroAug 2021View details →

dryad36/100

Data from: Environmental context determines pollution impacts on ecosystem functioning

Global change assessments have typically ignored synthetic chemical pollution, despite the rapid increase of pharmaceuticals, pesticides, and industrial chemicals in the environment. Part of the problem reflects the multifarious origins of these micropollutants, which can derive from urban and agricultural sources. Understanding how micropollutants harm ecosystems is a major scientific challenge due to asymmetries of stress across trophic levels and ecological surprises generated by multiple drivers interacting in human-impacted landscapes. We used field assays above and below municipal wastewater treatment plants (WWTPs) in 60 sampling locations across 20 Swiss streams to test how micropollutants and nutrients originating from WWTPs affect two trophic levels (microbes and detritivores) and their role in leaf litter processing. Wastewater impacts were asymmetric across trophic levels, with the detritivore contribution declining relative to microbial-driven decomposition. The strength of negative impacts was context-dependent, peaking at sites with the highest upstream abundances of detritivorous invertebrates. Diffuse pollution from intensive agriculture and wastewater-born micropollutants contributed to reduced litter processing rates, including indirect effects apparently mediated through negative influences of insecticides on detritivores. Asymmetries in stress responses across trophic levels can introduce quantitative changes in consumer-resource dynamics and leaf litter processing. This means functional redundancies at different trophic levels are insufficient to compensate for biodiversity losses, causing environmental stressors such as chemical pollutants to have pervasive ecosystem-level impacts.

opencc-zeroOct 2022View details →

dryad36/100

Spring arrival of the common cuckoo at breeding grounds is strongly determined by environmental conditions in tropical Africa

Failure to adapt migration timing to changes in environmental conditions along migration routes and at breeding locations can result in mismatches across trophic levels, as occurs between the brood parasitic common cuckoo Cuculus canorus and its hosts. Using satellite tracking data from 87 male cuckoos across 11 years, we evaluate why the cuckoo has not advanced its arrival to the UK. Across years, breeding ground arrival was primarily determined by timing of departure from stopover in West Africa before northward crossing of the Sahara. Together with high population synchrony and low apparent endogenous control of this event, this suggests that a seasonal ecological constraint operating here limits overall variation in breeding grounds arrival, although this event was itself influenced by carry-over from timing of arrival into tropical Africa. Between-year variation within individuals was, in contrast, mostly determined by northward migration through Europe, likely due to weather conditions. We find evidence of increased mortality risk for a) early birds following migration periods positively impacting breeding grounds arrival, and b) late birds, possibly suffering energy limitation, after departure from the breeding grounds. These results help identify areas where demands of responding to global change can potentially be alleviated by improving stopover quality.

opencc-zeroJun 2023View details →

dryad36/100

Data from: phenology and environmental determinants of explosive breeding in gliding treefrogs: diel timing of rainfall matters

The influence of abiotic and biotic factors on the temporal pattern of calling and breeding for many temperate anurans is well understood. However, few studies have documented patterns of reproduction in explosive-breeding tropical frogs or incorporated multiple environmental factors in their analyses, especially across multiple breeding seasons. We combine long-term natural history observations and automated data collection methods with boosted regression tree (BRT) analysis to determine the phenology and determinants of explosive breeding in the gliding treefrog, Agalychnis spurrelli. We monitored breeding for a total of 418 days across three breeding seasons and determined the relative importance of several environmental factors on the probability of calling and breeding activity. Our study population of A. spurrelli on Costa Rica's Osa Peninsula forms breeding aggregations up to 11 times per year during 1–2-day long explosive-breeding events, from late May to mid-September. Calling and breeding activity are strongly and positively related to accumulated rainfall during the previous 24 and 48–24 hours before, particularly rainfall during the afternoon and evening. Day-of-year, days since breeding occurred, and lunar phase also influence reproductive activity. This study provides the first description and analysis of the phenology and factors that predict explosive breeding in A. spurrelli and illustrates the value of using automated data collection paired with BRTs for analysis of complex ecological data.

opencc-zeroSep 2023View details →

dryad36/100