Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
245
datasets available to search
ShareScore release 0.9.0
Dataset results
245 results for “genome-wide differentiation”
Genome-wide changes in DNase-hypersensitivity during osteoblastogenesis reveal differential usage of DNA motifs and define novel cis-regulatory regions that control gene expression during differentiat
GEO Series GSE55045. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Arsenic hexoxide has differential effects on cell proliferation and genome-wide gene expression in human primary mammary epithelial and MCF7 cells
GEO Series GSE157574. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide definition of regulatory elements in hematopoietic stem cell differentiation [RNA-seq (CAGE)]
GEO Series GSE70674. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
NuRD-interacting protein ZFP296 regulates genome-wide NuRD localization and differentiation of mouse embryonic stem cells (ChIP-seq)
GEO Series GSE117287. Mus musculus. 36 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide differential DNA methylation in tropically adapted Creole cattle and their Iberian ancestors
GEO Series GSE101796. Bos taurus. 6 samples. Type: Methylation profiling by high throughput sequencing.
A Genome-Wide CRISPR Screen Identifies BRD4 as a Regulator of Cardiomyocyte Differentiation [in-vivo scRNA-seq]
GEO Series GSE184921. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide expression profiling of an in vitro model for studying esophageal epithelial differentiation
GEO Series GSE65335. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide transcriptional analysis of the primitive erythroid (EryP) lineage differentiation
GEO Series GSE24127. Mus musculus. 24 samples. Type: Expression profiling by array.
A Genome-Wide CRISPR Screen Identifies BRD4 as a Regulator of Cardiomyocyte Differentiation [CUT&RUN]
GEO Series GSE253329. Homo sapiens. 10 samples. Type: Other.
Genome-wide characterization of lncRNAs and mRNAs in muscles with differential meat quality
GEO Series GSE207449. Sus scrofa. 6 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Genome-wide DNA accessibility maps and differential gene expression using ChIP-seq, ATAC-seq and RNA-seq for the human secondary fibroblast cell line hiF-T and whole worms with and without knockdown o
GEO Series GSE98758. Caenorhabditis elegans; Homo sapiens. 58 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Genome-wide analysis of mRNA expression alterations of mucosa associated lymphoid tissue lymphoma translocation gene 1 (Malt1) -/- or Wild Type (WT) Naïve T cells induced to differentiate into (T help
GEO Series GSE40931. Mus musculus. 40 samples. Type: Expression profiling by array.
Genome-wide search for differentially expressed RNAs responsible for the effects induced by Ebola virus replication and transcription
GEO Series GSE105414. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Genome-wide Screen for Differentially Methylated Long Noncoding RNAs identifies Esrp2 and lncRNA Esrp2-as Regulated by Enhancer DNA Methylation with Prognostic Relevance for Human Breast Cancer
GEO Series GSE96641. Mus musculus. 21 samples. Type: Expression profiling by high throughput sequencing.
A Genome-Wide CRISPR Screen Identifies BRD4 as a Regulator of Cardiomyocyte Differentiation [in-vivo bulk RNA-seq]
GEO Series GSE184920. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Computational analysis of genome-wide DNA-methylation during the differentiation of human embryonic stem cells along the endodermal lineage
GEO Series GSE21715. Homo sapiens. 6 samples. Type: Expression profiling by array.
Genome-wide transcriptome analysis of pluripotent (2iL) or differentiated (2iL withdrawal) wild-type or Esrrb KO mES cells.
GEO Series GSE184133. Mus musculus. 39 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide ChIP-Seq reveals a dramatic shift in the binding of the transcription factor erythroid Kruppel-like factor during erythrocyte differentiation
GEO Series GSE48020. Mus musculus. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Genome-wide histone modification and accessibility maps of mESCs, in the pluripotent state and after induced differentiation
GEO Series GSE120376. Mus musculus. 26 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide occupancy map of GATA-1 in proliferating and differentiating murine ES cell derived erythroid progenitors (ES-EP)
GEO Series GSE35379. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.