Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
599
datasets available to search
ShareScore release 0.9.0
Dataset results
599 results for “health data”
Research Beyond the Lab, Spring Term 2022, Global Health Engineering, ETH Zurich. Raw data and analysis-ready derived data on waste management in public spaces in Zurich, Switzerland.
<p>This repository contains all raw and derived data produced as part of the <a href="https://rbtl-fs22.github.io/website/">ETH Zurich course "Research Beyond the Lab: Open Science and Research Methods for a Global Engineer" (151-8102-00L)</a> offered in spring term 2022.</p> <p>Students were assigned teams of four to conduct a collaborative research project broadly addressing the theme of “Trash in the Public Spaces of Zurich” in collaboration with <a href="https://www.stadt-zuerich.ch/ted/de/index/entsorgung_recycling.html">Entsorgung & Recycling Zürich (ERZ)</a>, the waste management department at Stadt Zürich.</p> <p>Research methods and design are taught in the first half of the course. Surveys and a waste characterisation study are then designed based on the research questions students have developed in their respective teams. The collected raw data is used in the course to teach principles of research data management, tidy data structures, reproducible research with R & RStudio, and collaboration and version control with Git & GitHub.</p>
Data from: CoAct Citizen Science chatbot explores social support networks in mental health based on lived experiences
<p>A data set on lived experiences in the context of social support in mental health, created within a Citizen Social Science project. </p> <p><br> Societies around the world increasingly encounter wicked and complex problems, such as those related to mental health, environmental justice, and youth employment. <strong>CoAct as a EU-funded global effort</strong> addresses these problems by deploying Citizen Social Science. </p> <p> </p> <p><strong>Citizen Social Science</strong> is understood here as participatory research co-designed and directly driven by citizen groups sharing a social concern. This methodology wants to give citizen groups an equal ‘seat at the table’ through <strong>active participation in research</strong>, from the design to the interpretation of the results and their transformation into concrete actions. Citizens thus act as <strong>co-researchers</strong> and are recognised as in-the-field competent experts. </p> <p> </p> <p>In Barcelona, a group of <strong>32 co-researchers</strong> work together with the OpenSystems group, Universitat de Barcelona, the Catalan Federation of Mental Health (Federació Salut Mental Catalunya), and with the help of many others on a better understanding of informal <strong>social support networks in mental health</strong> in the project <em>CoActuem per la Salut Mental</em> (lit. “We act together for mental health”). The co-researchers, who are either persons with a personal history of mental health problems or are family members of the latter, contributed their <strong>personal experiences related to social support</strong> in the form of <strong>222 micro-stories</strong>, each shorter than 400 characters, and most accompanied by an illustration by Pau Badia.</p> <p> </p> <p>Those micro-stories form the heart of the first co-created Citizen Science chatbot, the code of which is open on <a href="https://github.com/Chaotique/CoActuem_per_la_Salut_Mental_Chatbot.git">https://github.com/Chaotique/CoActuem_per_la_Salut_Mental_Chatbot.git</a> . The <strong>Telegram chatbot</strong> sends them to participants <strong>on a daily basis over the course of a year</strong> and asks them either, whether they and/ or their close surrounding lived this experience, too (stories of type C), or, how they would or would have reacted in the presented situation (stories of type T). The answers of each participant can be contrasted with the individual participants’ answer to a 32-questions <strong>socio-demographic survey</strong>. Further, the timing of the messages is included to allow for a broader analysis. </p> <p> </p> <p>The chatbot is still running, hence this data set will still be updated. For further information on the project <strong>CoAct</strong>, see <a href="https://coactproject.eu/">https://coactproject.eu/</a>. For further details on the co-creation process and purpose of the chatbot <strong>CoActuem per la Salut Mental</strong>, take a look on <a href="https://coactuem.ub.edu/">https://coactuem.ub.edu/</a>. Please direct your questions regarding the data set to <strong>coactuem[at]ub.edu</strong>.</p> <p> </p> <p><strong>Acknowledgements</strong></p> <p>The CoAct project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement number 873048. We especially thank the co-researchers for the passion and time invested.</p>
Data underlying the publication: "Effects of hatching system on chick quality, welfare and health of young breeder flock offspring"
<p>The aim of the current study was to evaluate effects of two alternative hatching systems (hatchery-feeding and on-farm hatching)<br> compared to conventional hatching systems with respect to chick quality, welfare and health of a young breeder flock.<br> To study the effect of treatments on the competence of the humoral immune response, blood titres after a live attenuated NCD<br> vaccination was assessed.<br> To study differences in disease resilience, the susceptibility to develop tracheal inflammation after infection with a<br> life attenuated infectious bronchitis vaccine virus was assessed by trachea lesion scoring and expression of genes related<br> to epithelial integrity and inflammatory responses.</p>
Publication & Supplementary data: Pro-health compounds and antioxidant activity of 65 potato cultivars
<p>Metadata (climatic conditions, list of varieties, field plan, etc.) and data (carotenoid content, vitamin C content, radical scavenging activity DPPH and FRAP, yellow index) related to the paper of Tatarowska et al., "The content of total carotenoids, vitamin C and antioxidant properties of 65 potato cultivars characterised under the European project ECOBREED" published in Int. J. Mol. Sci. 24 (2023), 11716.</p>
Supplementary data and summary statistics - Genetic influences on circulating retinol and its relationship to human health
<p><strong>Summary statistics from the circulating retinol GWAS</strong></p> <p>See -<em><strong> GWAS_summary_stats_README.txt </strong></em>for details of these files and the header names. METSIM+INTERVAL meta-analyses have a sample size of 17268. The full meta-analysis that includes ATBC+PLCO has a sample size of 22274.</p> <p><strong>Please cite the following if you use any of these data </strong>- Reay, W.R. et al. Genetic influences on circulating retinol and its relationship to human health. Nature Communications (2024).</p> <p>By downloading these summary statistics, investigators agree to the following:</p> <ol> <li>Investigators acknowledge that these data are provided on an “as-is” basis, without warranty of any type, expressed or implied, including but not limited to any warranty as to their performance, merchantability, or fitness for any particular purpose.</li> <li>Investigators will not cross-post these data or make them available elsewhere – this website is the definitive source for these data without express written permission from the study corresponding authors.</li> <li>Investigators will never attempt to identify any participant who contributed to these data.</li> <li>Any commercial or for-profit use of these data is forbidden unless express permission is sought from the study corresponding authors.</li> <li>Investigators will cite the associated manuscript when using these data.</li> </ol> <p><strong>Supplementary data from the circulating retinol GWAS phenome-wide Mendelian randomisation study</strong></p> <p>1. MR_retinol_as_exp - full output from the MR-pheWAS using circulating retinol as the exposure</p>
Björkö Wind Turbine Version 1 (45kW) high frequency Structural Health Monitoring (SHM) data
<p>The Chalmers wind turbine has variable speed operation with a direct driven generator and a frequency converter, it also has a digital control system developed by Chalmers. The wind turbine has a rated power of 45 kW and rated speed of 75 rpm. The wooden tower is 30 m high, the blades of carbon fibres are 7.5 m long, and the turbine diameter is 15.9 m. The individually blade pitch system is electrical. The turbine is situated on the island Björkö at Skarviksvägen, 20 km west of Göteborg city. The coordinates are: 57.71818820625921, 11.683382148764485.</p> <p><br> 69 SCADA and structural vibration and loads Channels timeseries (sampled at 20 and 100 Hz) such as nacelle accelerations, tower and blades bending moments are included.</p> <p><br> Structured metadata about wind turbine characteristics, SCADA, vibration and loads channels are included as JSON files and CSV.</p> <p>This particular dataset consisting of high frequency sampled data, is intended for condition and structural health analysis.</p> <p><strong>The data covers:</strong></p> <ul> <li>the measurements sampled at 100 Hz correspond to the period from 05 July 2022 to 9 June 2023</li> <li>the measurements sampled at 20 Hz correspond to the period from 05 July 2022 to 2 August 2023</li> </ul> <p><strong>This repository includes:</strong></p> <p><strong>Time-series data in csv format:</strong></p> <ul> <li>B1_CL4_20.csv (this is the data sampled at 20 Hz)</li> <li>B1_CL4_100.csv (this is the data sampled at 100 Hz)</li> </ul> <p><strong>Metadata:</strong></p> <ul> <li>Bjorko_Sensors_Specs_Metadata.csv (Sensors signals specification in csv format)</li> <li>Bjorko_modes_mapping.csv (numerical integer value representing the wind turbine controller system mode in csv format)</li> <li>Bjorko_modes_mapping.json (numerical integer value representing the wind turbine controller system mode in csv JSON format)</li> <li>Bjorko_digital_io_states_mappings.csv (Description of digital input and output states in the wind turbine controller system in csv format)</li> </ul> <p><strong>Media:</strong></p> <ul> <li>Chalmers-Wind turbine.pdf (description of the wind turbine including pictures)</li> <li>Chalmers wind turbine description 220121-short.pdf (description of the wind turbine including pictures)</li> </ul> <p><strong>Semantic artifacts:</strong></p> <ul> <li>N/A</li> </ul> <p><strong>Other:</strong></p> <ul> <li>N/A</li> </ul> <p>Additional information is available upon request.</p>
Aventa AV-7 ETH Zurich Research Wind Turbine SCADA and high frequency Structural Health Monitoring (SHM) data
<p><strong>General description of wind turbine: </strong>The ETH owned wind turbine is Aventa AV-7, manufactured by Aventa AG in Switzerland and was commissioned in December 2002. The turbine is operated via a belt-driven generator and a frequency converter with a variable speed drive. The rated power of the Aventa AV-7 is 7 kW, beginning production at a wind speed of 2 m/s and having a cut-off speed of 14 m/s. The rotor diameter is 12.8 m with 3 rotor blades, and a hub height is 18m. The maximum rotational speed of the turbine is 63 rpm. The tower is a tubular steel-reinforced concrete structure, supported on concrete foundation, while the blades are made of glassfiber with a tubular steel main-spar. The turbine is regulated via a variable-speed and variable pitch control system.</p> <p><strong>Location of site: </strong>The wind turbine is located in Taggenberg, about 5 km from the city centre of Winterthur, Switzerland. This site is easily accessible by public transport and on foot with direct road access right next to the turbine. This prime location reduces the cost of site visits and allows for frequent personal monitoring of the site when test equipment is installed. The coordinates of the site are: 47°31'12.2"N 8°40'55.7"E.</p> <p><strong>Control and measurement systems and signals: </strong>The turbine is regulated via a variable-speed and collective variable pitch control system.</p> <p><strong>SHM Motivation: </strong>Designed and commissioned in 2002, the Aventa wind turbine in Winterthur is soon reaching its end of design lifetime. In order to assess the various techniques of predicting the remaining useful lifetime, a Structural Health Monitoring (SHM) campaign was implemented by ETH Zurich. The monitoring campaign started in 2020, and is still ongoing. In addition, the setup is used as a research platform on topics such as system identification, operational modal analysis, faults/damage detection and classification. We analyze the influence of operational and environmental conditions on the modal parameters and to further infer Performance Indicators (PIs) for assessing structural behavior in terms of deterioration processes.</p> <p><strong>Data Description: </strong>The tower and nacelle have been instrumented with 11 accelerometers distributed along the length of the tower, nacelle main frame, main bearing and generator. Two full bridge strain gauges are installed on the concrete tower based measuring fore-aft and side-side strain (and can be converted to bending moments) – all acceleration and strain signals sampled at 200Hz. Temperature and humidity are measured at the tower base – 1Hz data. In additional we are collecting operational performance data (SCADA), namely: wind speed, nacelle yaw orientation, rotor RPM, power output and turbine status – SCADA signals are sampled at 10Hz. See appendix for further details of the sensors layout.</p> <p>The measurements/instrumentation setup, type and layout is provided in the pdf files.</p> <p><strong>The data:</strong> the data is provided in zip files corresponding to four use-cases as follows:</p> <ul> <li>Normal operation data for system identification</li> <li>Aerodynamic imbalance on one blade</li> <li>Rotor icing event</li> <li>Failure of the flexible coupling of the linear drive of the collective pitch system</li> </ul> <p>The data for each of the four uses-cases is organized in zip files. The content of each zip file is as follows:</p> <ul> <li>Time-series data in HDF5 format</li> <li>Metadata: <ul> <li>Turbine specification (Aventa-AV-7.json and Aventa-AV-7.yaml)</li> <li>Sensor specification (Aventa_sensors.json )</li> <li>Unstructured description of the Aventa Turbine and the installed sensors (Aventa_Sensors_Specs.xlsx)</li> </ul> </li> <li>Semantic artifacts: <ul> <li>WindIO Wind Turbine YAML schema describing turbine specifications (IEAontology_schema.yaml)</li> <li>Sensor specification JSON schema (sensors_schema.json)</li> </ul> </li> <li>Media: Pictures of leading edge roughness and a clip of wind turbine operation</li> <li>Code: Jupyter notebook containing example code to load metadata from JSON and data from HDF5 files (example.ipynb)</li> </ul> <p>Additional data is available upon request, please contact:</p> <ul> <li>Prof. Dr. Eleni Chatzi (chatzi@ibk.baug.ethz.ch)</li> <li>Dr. Imad Abdallah (ai@rtdt.ai , abdallah@ibk.baug.ethz.ch)</li> </ul> <p>For further details or questions, please contact:</p> <p>Prof. Dr. Eleni Chatzi<br> Chair of Structural Mechanics & Monitoring</p> <p>ETH Zürich<br> <a href="http://www.chatzi.ibk.ethz.ch/">http://www.chatzi.ibk.ethz.ch/</a></p>
Covid-19 Vaccine Monitoring project (CVM)-Electronic Health Record data sources Codelist
<p>This is the code list that was used to identify outcomes and covariates (those tagged as in narrow) in electronic health records of participating data sources in the the CVM study which was addressing the following questions</p> <p> </p> <p>1)<strong> To create and assess readiness of electronic health record data sources for rapid evaluation of safety signals by </strong></p> <ul> <li> <p>Providing an overview of the methods for identification of COVID-19 vaccine exposure in the data sources </p> </li> <li> <p>Monitoring the number of individuals exposed to any COVID-19 vaccine and to compare this to COVID-19 vaccine exposure (benchmark: ECDC vaccine tracker)1 </p> </li> <li> <p>Generation of updated background rates for AESIs </p> </li> </ul> <p><strong>2) To conduct rapid safety assessment studies using electronic healthcare records and support EMA safety assessments. </strong></p> <p>The protocol for this study is publicly available www.encepp.eu/encepp/viewResource.htm?id=42637. The report with results using the code list is publicly available on Zenodo as well. </p> <p> </p> <p> </p> <p> </p>
Mapping literature reviews on coral health: A review map, critical appraisal, and bibliometric analysis - Data and Code
<p>Data, code, and supplementary materials for "Mapping literature reviews on coral health: A review map, critical appraisal, and bibliometric analysis" by Burke et al., published in Ecological Solutions and Evidence.</p>
Data for The impact of information about tobacco-related reproductive vs. general health risks on South Indian women's tobacco use decisions
<p>Tobacco Intervention Study Mysore India March-April 2016</p> <p>Published version: <a href="https://doi.org/10.1017/ehs.2020.61">https://doi.org/10.1017/ehs.2020.61</a></p>
Data Visualization - Individual Project - G20 Countries - Military, Health Care and Educational Spendings
<p>This Project is part of the course work for Data visualization DATS 6401. In this project, I have created webpage to show data analysis on G20 countries - military, health care and educational spending from 2011 - 2017. Google Visualization API is used for all visualization graphs in the webpage.</p>
A Tool for Uncertainty Quantification in Reconstructing Sparse Water Quality Time Series Data to Assess Risk Metrics for Watershed Health and TMDL Analysis
<p>The uploaded file contains the input and output data which can be used to reproduce the results in the research article 'Uncertainty Quantification in Reconstruction of Sparse Water Quality Time Series: Implications for Watershed Health and Risk-Based TMDL Assessment'. Please refer to the file '<a href="https://zenodo.org/api/files/31b59cce-8eb2-4ee7-93aa-61474c6f6359/dst_2019_SJRW_TP_TDS.zip?versionId=2af2b54d-d5fb-4720-919d-de2e827595e2">dst_2019_SJRW_TP_TDS.zip'</a> for updated files..</p>
H2M survey data on commercialisation training needs of Health Researchers
<p>Health-2-Market was a 3-year long Coordination and Support Action, funded by the European Union’s Seventh Framework Programme for research, technological development and demonstration (Grant Agreement No 305532). H2M aimed at providing training and individual support to Health / Life Sciences researchers in the process of translating their research results into successful new business ideas.</p> <p>With a view to properly adapting the training offer of the project to the needs of Health / Life Sciences researchers in terms of entrepreneurship and business skill development a Training Needs Analysis (TNA) was conducted. In this context, H2M launched an online survey targeted at Health / Life Sciences researchers who have been involved in EU health projects. In particular, the objectives of the survey were:</p> <ul> <li>To formulate a descriptive understanding of various aspects of commercialisation and training needs of the main target group of the project;</li> <li>To divide this target group into homogeneous sub-groups (clusters) along a number of key characteristics such as demographics, commercialisation attitudes and needs;</li> <li>To understand preferences and importance of different aspects and needs through the analysis of: <ul> <li>Knowledge areas that can influence commercialisation behaviour;</li> <li>Training modalities that have an effect on the intention to participate and /or on the perception of the usefulness of a commercialisation training;</li> <li>Variations identified over different sub-groups.</li> </ul> </li> </ul> <p>The survey was dispatched to a database composed of 7,991 unique contacts of participants in previous health projects, accessed through the Directorate General for Health and Food Safety of the European Commission. The initial aim of at least 50 complete responses was overwhelmingly surpassed: 637 respondents completed the survey in full.</p> <p>The “H2M survey data on commercialisation training needs of Health Researchers” dataset contains the raw, anonymised data that were collected from these respondents, along with the questionnaire items that were utilised.</p>
Semantic Enrichment of the Laboratory Data Dictionary of the Study of Health in Pomerania (SHIP-START-4) with LOINC; Detailed Mapping Results
<p>Unlike West Germany, high morbidity and mortality have been observed in East Germany over the last century. The regional population-based Study of Health in Pomerania (SHIP) therefore investigates the long-term progression of sub-clinical findings, their determinants and prognostic values, to acquire knowledge that facilitates early diagnosis and thus helps prevent the progression of disease. The SHIP covers various areas of patient health. Each SHIP data set is accompanied by a data dictionary (DD) which provides descriptions of variables and definitions.</p> <p>This work shows the detailed mapping results of the semantic enrichment of the SHIP-START-4 medical laboratory data dictionary with LOINC codes. This work also provides detailed descriptions of the concepts applied in the semnatic enrichment. The results of this work serve as a critical step towards improving its interoperability and hence FAIRness for the SHIP laboratory-related measurements. </p>
Research Data Management in Selected Health Research Institutions in Uganda
<p>This data set was collected from Researchers in three purposively selected health reseach Institutions in Uganda. The purpose of the study was to explore compliance to FAIR data princiles and Open science initiative given the increasing dependence on donor funding and need to fulfill the requirement for good research practices. </p>
EFSA Opinion Update of risks for animal health related to the presence of ochratoxin A (OTA) in feed: Annexes on Occurrence data in feed submitted to EFSA
<p>Annexes to EFSA's Update Opinion on the risks for animal health related to the presence of OTA in feed. Annex B includes the occurrence data in feed extracted from EFSA Data Warehouse for the period from 2012 to 2021. Annex C contains the occurrence data expressed in dry matter following analysis and cleansing of the dataset as detailed in EFSA's Opinion. Annex D lists the samples of 'Compound feed' and other feed materials except forage expressed in whole weight. The number of samples across some of the feed categories differ among the two annex C and D because in few cases the moisture content was not reported (and no assumption on the moisture could be done), precluding the conversion of the analytical results to either whole weight or dry matter. </p>
Tables, figures, and country data complementing the European Union One Health Zoonoses 2022 Report
<p>European Food Safety Authority; European Centre for Disease Prevention and Control</p><p>All summary tables and figures produced for the European Union One Health 2022 Zoonoses Report are provided as archives containing Excel files for tables, and as PDF or PNG files for figures.</p><p><strong>All country data connected to this Report are published SEPARATELY on Knowledge Junction - see related identifiers. This is because DATA OWNERSHIP for country data stays with the organisation(s) of the country submitting the data - for further reference see doi:10.2903/sp.efsa.2019.EN-1544.</strong></p><p>Supplementary datasets submitted are given in the related identifier section, however for clarity we give here the information on what they refer to:</p><p><strong>10.5281/zenodo.10255165 </strong>Foodborne outbreaks</p><p><strong>10.5281/zenodo.10256864 </strong>Disease status</p><p><strong>10.5281/zenodo.10255061 </strong>Animal Population</p><p><strong>10.5281/zenodo.10246432 </strong>Prevalence</p><p><i><strong>Sample-based data submitted by specific countries</strong></i></p><p><strong>10.5281/zenodo.10257184 </strong>Finland</p><p><strong>10.5281/zenodo.10257162 </strong>Croatia</p><p><strong>10.5281/zenodo.10257105 </strong>Norway</p><p><strong>10.5281/zenodo.10257034 </strong>Luxembourg</p><p><strong>10.5281/zenodo.10257142 </strong>United Kingdom (Northern Ireland)</p><p><strong>10.5281/zenodo.10257210 </strong>Ireland</p><p><strong>10.5281/zenodo.10257388 </strong>Sweden</p><p>Journal article: 10.2903/j.efsa. 2023.8442 </p><p>Citation</p><p>EFSA (European Food Safety Authority) & ECDC (European Centre for Disease Prevention and Control). (2023). Tables, figures, and country data complementing the European Union One Health Zoonoses 2022 Report [Dataset]. <a href="https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fdoi.org%2F10.5281%2Fzenodo.10057302&data=05%7C01%7C%7Cd53ce1fd0eeb4b027cb608dbf6528f55%7C406a174be31548bdaa0acdaddc44250b%7C1%7C0%7C638374606688640910%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=46n1ois6rCgqRamDnk4%2B42K2XGwwg1T1nvG5ezYqqyg%3D&reserved=0">https://doi.org/10.5281/zenodo.10057302</a></p>
From Pixels to Phenotypes: Integrating Image-Based Profiling with Cell Health Data Improves Interpretability
<p>Code: https://github.com/srijitseal/BioMorph_Space<br> <br> Cell Painting assays generate morphological profiles that are versatile descriptors of biological systems and have been used to predict <em>in vitro</em> and <em>in vivo</em> drug effects. However, Cell Painting features are based on image statistics, and are, therefore, often not readily biologically interpretable. In this study, we introduce an approach that maps specific Cell Painting features into the BioMorph space using readouts from comprehensive Cell Health assays. We validated that the resulting BioMorph space effectively connected compounds not only with the morphological features associated with their bioactivity but with deeper insights into phenotypic characteristics and cellular processes associated with the given bioactivity. The BioMorph space revealed the mechanism of action for individual compounds, including dual-acting compounds such as emetine, an inhibitor of both protein synthesis and DNA replication. In summary, BioMorph space offers a more biologically relevant way to interpret cell morphological features from the Cell Painting assays and to generate hypotheses for experimental validation.</p> <p> </p> <p>The following datasets are released:<br> </p> <p>Cell_Health_median_357_profiles_70_labels.csv :<br> The Cell Heath dataset for CRISPR perturbations. Contains median consensus signatures for the 357 consensus profiles (119 CRISPR perturbations × 3 cell lines) Ref: Way et al.</p> <p>Cell_Painitng_CRISPR_Perturbations_357_profiles_827_features_scaled.csv:<br> The Cell Painting dataset for CRISPR perturbations. Contains 827 morphology features (and metadata annotation) for 357 consensus profiles (119 CRISPR perturbations × 3 cell lines). Ref: Way et al.</p> <p>Cell_Painting_data_658_compounds_827_Features_scaled.csv<br> The Cell Painting dataset for compound perturbations. Contains 658 structurally unique compounds with 827 Cell Painting features. Ref: Bray et al</p> <p>Endpoints_9_Mitotox_biological_activities_658_compounds.csv<br> The biological assay activity labels for compound perturbations. Contains 658 structurally unique compounds with 9 biological activity consensus hit calls. Ref: ToxCast/MoleculeNet</p> <p>BioMoprh_pvalue_658_compunds_398_BioMorph_terms.csv:<br> The dataset of standardised BioMorph term p-values. Contains 398 BioMorph terms for the 658 compounds in the biological activity dataset. <br> <br> References: <br> Way et al. Predicting cell health phenotypes using image-based morphology profiling. Mol Biol Cell. 2021;32(9):995-1005.<br> Bray et al. A dataset of images and morphological profiles of 30 000 small-molecule treatments using the Cell Painting assay. Gigascience. 2017;6(12):1-5. <br> MoleculeNet: Wu et al. MoleculeNet: A benchmark for molecular machine learning. Chem Sci. 2018;9(2):513-530. <br> ToxCast: Exploring ToxCast Data | US EPA https://www.epa.gov/chemical-research/exploring-toxcast-data (accessed Jul 9, 2023).</p>
District level health and well-being data
<p>Self-reported health and well-being data collected in the Living Labs district and in a control district of the Front Runner Cities of proGIreg project (Dortmund: Huckarde and Mengede districts; Turin: Mirafiori Sud and Barriera di Milano districts; Zagreb: Sesvete and Špansko-Jug districts), before and after the project NBS implementations (2019 and 2022). More details about methodology are reported in Baldacchini, C. (2019): Monitoring and Assessment Plan, Deliverable No. 4.1, proGIreg. Horizon 2020 Grant Agreement No 776528, European Commission, 124.</p> <p>More details about results are reported in: Baldacchini, C., Calfapietra, C. (2023): Living Labs impact at the district level, Deliverable No.4.8, proGIreg. Horizon 2020 Grant Agreement No 776528, European Commission, pp 93.</p>
Data from: Do the health benefits of boiling drinking water outweigh the negative impacts of increased indoor air pollution exposure?
<p><strong>Background: </strong>Billions of the world's poorest households are faced with the lack of access to both safe drinking water and clean cooking. One solution to microbiologically contaminated water is boiling, often promoted without acknowledging the additional risks incurred from indoor air degradation from using solid fuels.</p> <p><strong>Objectives: </strong>This modeling study explores the tradeoff of increased air pollution from boiling drinking water under multiple contamination and fuel use scenarios typical of low-income settings.</p> <p><strong>Methods: </strong>We calculated the total change in disability-adjusted life years (DALYs) from indoor air pollution (IAP) and diarrhea from fecal contamination of drinking water for scenarios of different source water quality, boiling effectiveness, and stove type. We used Uganda and Vietnam, two countries with a high prevalence of water boiling and solid fuel use, as case studies. </p> <p><strong>Results: </strong>Boiling drinking water reduced the diarrhea disease burden by a mean of 1110 DALYs and 368 DALYs per 10,000 people for adults and children <5 years in Uganda, respectively, for high-risk water quality and the most efficient (lab-level) boiling scenario, with smaller reductions for less contaminated water and ineffective boiling. Similar results were found in Vietnam, apart from fewer avoided DALYs in children due to different demographics. In both countries, for households with high baseline IAP from existing solid fuel use, adding water boiling to cooking on a given stove was associated with a limited increase in IAP DALYs due to the log-linear dose-response curves. Boiling, even at low effectiveness, was associated with <em>net </em>DALY reductions for medium- and high-risk water, even if using unclean stoves/fuels. Replacing traditional stoves with improved stoves coupled with effective boiling practices significantly reduced total DALYs. </p> <p><strong>Discussion: </strong>Boiling water generally resulted in a net decrease in DALYs. Future efforts should empirically measure health outcomes from IAP vs. diarrhea associated with boiling drinking water using field studies with different boiling methods and stove types.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.