Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
84
datasets available to search
ShareScore release 0.9.0
Dataset results
84 results for “inbred lines”
Marek's Disease Virus Infection Induces Differential Chromatin Marks and Tissue-specific effects in inbred chicken lines
GEO Series GSE33541. Gallus gallus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide single nucleotide polymorphism array and whole-genome sequencing reveal the inbreeding progression of Banna minipig inbred line
GEO Series GSE157935. Sus scrofa. 49 samples. Type: Genome variation profiling by high throughput sequencing; Genome variation profiling by SNP array; SNP genotyping by SNP array.
Root gene expression profiles of two maize inbred lines (Lo5 and T250) in response to nitrate treatment
GEO Series GSE49681. Zea mays. 42 samples. Type: Expression profiling by array.
RNA-seq of two maize inbred lines B73 and Mo17
GEO Series GSE183230. Zea mays. 12 samples. Type: Expression profiling by high throughput sequencing.
Gene expression analysis of nine European maize (Zea mays L.) inbred lines and nine corresponding hybrids
GEO Series GSE52411. Zea mays. 105 samples. Type: Expression profiling by array.
RNA-seq for two maize inbred lines
GEO Series GSE146666. Zea mays. 12 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide analysis of DNA methylation in maize inbred lines
GEO Series GSE128859. Zea mays. 8 samples. Type: Methylation profiling by high throughput sequencing.
QX recombinant inbred advanced intercross lines of C. elegans
GEO Series GSE23857. Caenorhabditis elegans. 208 samples. Type: Expression profiling by array.
The susceptibility of sea-island cotton recombinant inbred lines to Fusarium oxysporum f. sp. vasinfectum infection is characterized by altered expression of long noncoding RNAs
GEO Series GSE95288. Gossypium barbadense. 12 samples. Type: Expression profiling by high throughput sequencing.
244K array Comparative Genomic Hybridization for the characterization of CNVs among inbred Fayoumi, inbred Leghorn, Line A broiler, and Line B broiler chicken
GEO Series GSE44440. Gallus gallus. 24 samples. Type: Genome variation profiling by genome tiling array.
Root gene expression profiles of two maize inbred lines (Lo5 and T250) showing different nitrogen use efficiency (NUE) in response to the growth without N.
GEO Series GSE135613. Zea mays. 18 samples. Type: Expression profiling by array.
Single-base resolution DNA methylation profiles of two highly inbred chicken lines, Leghorn and Fayoumi, by whole-genome bisulfite sequencing (MethylC-seq).
GEO Series GSE56975. Gallus gallus. 2 samples. Type: Methylation profiling by high throughput sequencing.
Single-base resolution DNA methylomes of soybean recombinant inbred lines reveals heritability patterns of natural methylation variants
GEO Series GSE41753. Glycine max. 97 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Heat-Resistant Inbred Lines Coordinate the Heat Response Genes Expression Remarkably in Maize
GEO Series GSE254852. Zea mays. 8 samples. Type: Expression profiling by high throughput sequencing.
Comparative transcriptome analysis between hybrid and inbred lines provides molecular insights into vein ratio of leaf in Nicotiana tabacum L.
GEO Series GSE246929. Nicotiana tabacum. 30 samples. Type: Expression profiling by high throughput sequencing.
Chicken Spleen Tissues: MDV-infected vs non-infected in inbred lines 63, 72 & RCSM
GEO Series GSE24017. Gallus gallus. 36 samples. Type: Expression profiling by array.
Differential gene expression profile between two sunflower inbred lines with different ability to tolerate water stress
GEO Series GSE128556. Helianthus annuus. 32 samples. Type: Expression profiling by array.
Data from: Genetic diversity among INERA maize inbred lines with single nucleotide polymorphism (SNP) markers and their relationship with CIMMYT, IITA, and temperate lines
Background: Genetic diversity provides the capacity for plants to meet changing environments. It is fundamentally important in crop improvement. Fifty-nine local maize lines developed at INERA and 41 exotic (temperate and tropical) inbred lines were characterized using 1057 SNP markers to (1) analyse the genetic diversity in a diverse set of maize inbred lines; (2) determine the level of genetic diversity in INERA inbred lines and patterns of relationships of these inbred lines developed from two sources; and (3) examine the genetic differences between local and exotic germplasms. Results: Roger's genetic distance for about 64% of the pairs of lines fell between 0.300 and 0.400. Sixty one per cent of the pairs of lines also showed relative kinship values of zero. Model-based population structure analysis and principal component analysis revealed the presence of 5 groups that agree, to some extent, with the origin of the germplasm. There was genetic diversity among INERA inbred lines, which were genetically less closely related and showed a low level of heterozygosity. These lines could be divided into 3 major distinct groups and a mixed group consistent with the source population of the lines. Pairwise comparisons between local and exotic germplasms showed that the temperate and some IITA lines were differentiated from INERA lines. There appeared to be substantial levels of genetic variation between local and exotic germplasms as revealed by missing and unique alleles. Conclusions: Allelic frequency differences observed between the germplasms, together with unique alleles identified within each germplasm, shows the potential for a mutual improvement between the sets of germplasm. The results from this study will be useful to breeders in designing inbred-hybrid breeding programs, association mapping population studies and marker assisted breeding.
Data from: Selection of early soybean inbred lines using multiple indices
Open the record for dataset details and reuse information.
Data from: Genetic diversity among INERA maize inbred lines with single nucleotide polymorphism (SNP) markers and their relationship with CIMMYT, IITA, and temperate lines
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.