Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
71
datasets available to search
ShareScore release 0.9.0
Dataset results
71 results for “migratory distance”
Data from: Climatic predictors of long-distance migratory birds’ breeding productivity across Europe
Open the record for dataset details and reuse information.
Mixed-stock analysis reveals long-distance movements and few populations with large harvest contributions in lake-migratory brook trout
Open the record for dataset details and reuse information.
Consequences of migratory distance, habitat distribution and season on the migratory process in a short distance migratory shorebird population
Open the record for dataset details and reuse information.
Data from: Finish with a sprint: evidence for time‐selected last leg of migration in a long‐distance migratory songbird
Under time‐selected migration, birds should choose a strategy for outcompeting rivals over securing access to prime resources at the final destination. Thus, migration can be viewed as a race among individuals where winners are arriving first when conditions are suitable. The sprint migration hypothesis predicts that individuals shift from maximum sustained speed to a final burst of sprint to shorten the transition from migration to breeding (Alerstam, 2006). In this study, we test the hypothesis of a final sprint migration in a long‐distance Afro‐Palearctic migrant, the collared flycatcher Ficedula albicollis, during autumn and spring, and compare migration strategies between the seasons. In both seasons, collared flycatchers evidently exhibited sprint migration by increasing their overall speed over the last leg of migration after the Sahara crossing. This phenomenon was more pronounced in spring, contributing to overall faster spring migration and possibly highlighting higher importance for early arrival at the breeding grounds. In both seasons and particularly in spring, late departing individuals flew at a faster rate, partially being able to catch up with their early departing conspecifics. Differential fueling strategies may play an important role in determining migration speed, especially during the early stages of the migration, and might explain the observed differences in migration speeds between late and early departing individuals. Our findings suggest competition for early arrival at the breeding and at the nonbreeding destinations alike. Sprint migration might be an appropriate strategy to gain advantage over conspecifics and settle in prime territories as well as to cope with the increasingly earlier springs at high latitudes.
Data from: Body condition explains migratory performance of a long-distance migrant
Body condition (i.e. relative mass after correcting for structural size) affects the behaviour of migrating birds, but how body condition affects migratory performance, timing and fitness is still largely unknown. Here, we studied the effects of relative body condition on individual departure decisions, wind selectivity, flight speed and timing of migration for a long-distance migratory shorebird, the red knot Calidris canutus rufa. By using automated VHF telemetry on a continental scale, we studied knots' migratory movements with unprecedented temporal resolution over a 3-year period. Knots with a higher relative body condition left the staging site later than birds in lower condition, yet still arrived earlier to their Arctic breeding grounds compared to knots in lower relative body condition. They accomplished this by selecting more favourable winds at departure, thereby flying faster and making shorter stops en route. Individuals with a higher relative body condition in spring migrated south up to a month later than individuals in lower condition, suggesting that individuals in better condition were more likely to have bred successfully. Moreover, individuals with a lower relative body condition in spring had a lower probability of being detected in autumn, suggestive of increased mortality. The pressure to arrive early to the breeding grounds is considered to be an important constraint of migratory behaviour and this study highlights the important influence of body condition on migratory decisions, performance and potentially fitness of migrant birds.
Data from: Wind-associated detours promote seasonal migratory connectivity in a flapping flying long-distance avian migrant
1. It is essential to gain knowledge about the causes and extent of migratory connectivity between stationary periods of migrants to further the understanding of processes affecting populations, and to allow efficient implementation of conservation efforts throughout the annual cycle. Avian migrants likely use optimal routes with respect to mode of locomotion, orientation and migration strategy, influenced by external factors such as wind and topography. In self-powered flapping flying birds any increases in fuel loads are associated with added flight costs. Energy-minimizing migrants are therefore predicted to trade-off extended detours against reduced travel across ecological barriers with no or limited foraging opportunities. 2. Here we quantify the extent of detours taken by different populations of European nightjars Caprimulgus europaeus, to test our predictions that they used routes beneficial according to energetic principles and evaluate the effect of route shape on seasonal migratory connectivity. 3. We combined data on birds tracked from breeding sites along a longitudinal gradient from England to Sweden. We analysed the migratory connectivity between breeding and main non-breeding sites, and en route stopover sites just south of the Sahara desert. We quantified each track's route extension relative to the direct route between breeding and wintering sites, respectively, and contrasted it to the potential detour derived from the barrier reduction along the track while accounting for potential wind effects. 4. Nightjars extended their tracks from the direct route between breeding and main non-breeding sites as they crossed the Mediterranean Sea – Sahara desert, the major ecological barrier in the Palaearctic-African migration system. These clockwise detours were small for birds from eastern sites but increased from east to west breeding longitude. Routes of the tracked birds were associated with partial reduction of the barrier-crossing resulting in a trade-off between route extension and barrier reduction, as expected in an energy-minimizing migrant. 5. This study demonstrates how the costs of barrier crossings in prevailing winds can disrupt migratory routes towards slightly different goals, and thereby promote migratory connectivity. This is an important link between individual migration strategies in association with an ecological barrier, and both spatially and demographic population patterns. 16-Aug-2019
Data from: A full annual perspective on sex-biased migration timing in long-distance migratory birds
In many taxa, the most common form of sex-biased migration timing is protandry – the earlier arrival of males at breeding areas. Here we test this concept across the annual cycle of long-distance migratory birds. Using more than 350 migration tracks of small-bodied trans-Saharan migrants, we quantify differences in male and female migration schedules and test for proximate determinants of sex-specific timing. In spring, males on average departed from the African non-breeding sites about 3 days earlier and reached breeding sites ca. 4 days ahead of females. In autumn, males started migration about 2 days earlier, but this difference did not carry-over to arrival at the non-breeding sites. A cross-species comparison revealed large variation in the level of protandry and protogyny across the annual cycle. While we found tight links between individual timing of departure and arrival within each migration season, only for males the timing of spring migration was linked to the timing of previous autumn migration. In conclusion, our results demonstrate that protandry is not exclusively a reproductive strategy but rather occurs year-round and the two main proximate determinants for the magnitude of sex-biased arrival times in autumn and spring are sex-specific differences in departure timing and migration duration.
Data from: The large-scale drivers of population declines in a long-distance migratory shorebird
Migratory species can travel tens of thousands of kilometers each year, spending different parts of their annual cycle in geographically distinct locations. Understanding the drivers of population change is vital for conserving migratory species, yet the challenge of collecting data over entire geographic ranges has hindered attempts to identify the processes leading to observed population changes. Here, we use remotely sensed environmental data and count data to investigate the factors driving variability in abundance in two subspecies of a long-distance migratory shorebird, the bar-tailed godwit (Limosa lapponica). We compiled a spatially and temporally explicit dataset of three environmental variables to identify the conditions experienced by each subspecies in each stage of their annual cycle (breeding, non-breeding and staging). We used a Bayesian N-mixture model to analyze 18 years of monthly count data from 21 sites across Australia and New Zealand in relation to the remote sensing datasets. We found that the abundance of one subspecies (L. l. menzbieri) in their non-breeding range was related to climate conditions in breeding grounds, and detected sustained population declines between 1995 and 2012 in both subspecies (L. l. menzbieri, -6.7% and L. l. baueri, -2.1% year-1). To investigate the possible causes of the declines, we quantified changes in habitat extent at 22 migratory staging sites in the Yellow Sea, East Asia, over a 25-year period and found -1.7% and -1.2% year-1 loss of habitat at staging sites used by L. l. menzbieri and L. l baueri, respectively. Our results highlight the need to identify environmental and anthropogenic drivers of population change across all stages of migration to allow the formulation of effective conservation strategies across entire migratory ranges.
Data from: Habitat features and long-distance dispersal modify the use of social information by a long-distance migratory bird
1. The processes by which individuals select breeding sites have important consequences for individual tness as well as population- and community-dynamics. Although there is increasing evidence that many animal species use information acquired from conspecics to assess the suitability of potential breeding sites, little is known about how the use of this social information is modified by biotic and abiotic conditions. 2. We used an automated playback experiment to simulate two types of social information, post-breeding public information and pre-breeding location cues, to determine the relative importance of these cues for breeding site selection by a migratory songbird, the American redstart (Setophaga ruticilla). In addition, we used stable hydrogen isotopes to determine the dispersal status of individuals that responded to our experimental treatments and quantify whether long-distance dispersers use different social cues to select breeding sites compared to philopatric individuals. 3. We found that points that received pre-breeding location cue treatments were signi cantly more likely to be settled by redstarts than control points that received no playback. However, we found no evidence the redstarts used post-breeding public information gathered during one season to select breeding sites the following year. Breeding site habitat structure was also a strong predictor of settlement probability, indicating that redstarts modi ed the use of social information based on habitat cues. Furthermore, stable hydrogen isotope signatures from individuals that responded to location cue treatments suggest that long-distance dispersers may rely more heavily on these cues than local recruits. 4. Collectively, these results indicate that redstarts use multiple sources of information to select breeding sites, which could buffer individuals from selecting suboptimal sites when they breed in unfamiliar locations or when habitat quality becomes decoupled from social cues.
Seasonal survival and reversible state effects in a long-distance migratory shorebird
<p>1. Events during one stage of the annual cycle can reversibly affect an individual's condition and performance not only within that stage, but also in subsequent stages (i.e., reversible state effects). Despite strong conceptual links, however, few studies have been able to empirically link individual-level reversible state effects with larger-scale demographic processes.</p> <p>2. We studied both survival and potential reversible state effects in a long-distance migratory shorebird, the Hudsonian Godwit (Limosa haemastica). Specifically, we estimated period-specific survival probabilities across the annual cycle and examined the extent to which an individual's body condition, foraging success, and habitat quality during the nonbreeding season affected its subsequent survival and reproductive performance.</p> <p>3. Godwit survival rates were high throughout the annual cycle, but lowest during the breeding season, only slightly higher during southbound migration, and highest during the stationary nonbreeding season. Our results indicate that overwintering godwits foraging in high-quality habitats had comparably better nutritional status and pre-migratory body condition, which in turn improved their return rates and the likelihood that their nests and chicks survived during the subsequent breeding season.</p> <p>4. Reversible state effects thus appeared to link events between nonbreeding and breeding seasons via an individual's condition, in turn affecting their survival and subsequent reproductive performance. Our study thus provides one of the few empirical demonstrations of theoretical predictions that reversible state effects have the potential to influence population dynamics. </p>
Data from: Feather steroid hormone concentrations in relation to age, sex, and moulting time in a long distance migratory passerine
In birds, concentrations of testosterone (T) and corticosterone (Cort) are closely connected with many morphological, behavioural and other physiological traits, including reproduction, metabolism, immunity, and fitness. The direction of the effect of these hormones on above-mentioned traits, and the potential feedback between hormones are in general unclear; in addition, knowledge on how age and sex can affect T and Cort concentrations is still inconsistent. Our study used a novel method to analyse testosterone and corticosterone in feathers (Tf, Cortf) based on the pre-column chemical derivatization of hormones before LC-MS/MS analysis. Unlike previously used methods (RIA, EIA), our analytical procedure allows simultaneous analysis of both hormones from small amounts of feathers (4-25 mg) and thus overcomes the problem of insufficient detection limits. We applied this method to reveal associations between Tf and Cortf hormone concentrations and feather growth, age, and sex in feathers grown during the post-breeding (flanks) and pre-breeding (tails) periods in barn swallows (Hirundo rustica). There was neither a correlation between pre-breeding and post-breeding Tf, nor between pre-breeding and post-breeding Cortf. Tail Cortf concentrations were negatively associated with tail feather growth rates. Feather hormone concentrations were correlated in the pre-breeding period, negatively in males but positively in females. Both Cortf and Tf were higher in young birds compared to older ones, indicating either an age-related decrease in hormone concentrations within individuals, or the selective disappearance of individuals with high steroid concentrations. Males and females did not differ in Cortf, but Tf concentrations were higher in males than females, particularly during the pre-breeding period. In this study, we provide an effective method for analysing hormones in feathers in an ecological context, especially in situations when the total amount of feathers available for the analysis is limited.
It's time to go - Drivers and plasticity of migration phenology in a short-distance migratory ungulate
<p>Files provided in the repository consist of two dataframes (.Rdata format) and two scripts (.R format) to perform analyses and making figures presented in the paper: "Drivers and plasticity of migration phenology in a short-distance migratory ungulate, the Alpine ibex Capra ibex" </p> <p>Abstract: </p> <p><span>Recurring events like migrations are an important part of the biological cycles of species. Understanding the factors influencing the timing of such events is crucial for determining how species face the pervasive consequences of climate change in highly seasonal environments. Relying on data from 406 GPS-collared Alpine ibex </span><span>Capra ibex</span><span> monitored across 17 populations, we investigated the environmental and individual drivers of short-distance migration in this emblematic mountain ungulate. Notably, we assessed how variations in the onset of spring and autumn affected the timing of migration and the extent to which ibex exhibited behavioral plasticity in their response. We found that vegetation phenology, including spring growth and autumn senescence, along with snow dynamics - snowmelt in spring, first snowfall in autumn - were the main drivers of the timing of migration.</span></p> <p><span>In spring, ibex migration timing was synchronized with the peak of vegetation growth, but more in males than in females. Specifically, a shift of 10 days in vegetation growth peak delayed migration by 6.4 days for males and 2.7 days for females. This led to increased differences in migration timing between sexes when the vegetation growth peak occurred early or late in the season. In addition, ibex delayed migration timing when the length of growing season was longer and when the date of snowmelt on ibex summer range occurred later. Similarly, in autumn, prolonged vegetation senescence and delayed first snowfall led to later migration.</span></p> <p><span>Overall, most of the response to inter-annual variations in vegetation and snow phenology could be explained by individual behavioral plasticity. Nonetheless, females appear to be less plastic than males in their timing of spring migration, likely due to the parturition period following migration forcing them to trade off foraging needs with predation risk. As the identified drivers of ibex migration are known to be and will continue to be largely impacted by climate change, the capacity of ibex to respond to such rapid changes could differ between sexes. </span></p> <p> </p> <p> </p>
Experimental manipulation of photoperiod influences migration timing in a wild, long-distance migratory songbird
<p>Previous laboratory studies have demonstrated the role of photoperiod in cueing the migration timing of small land birds; however, how migration timing of young birds in wild environments develops in relation to these cues have rarely been investigated. Such investigations can make important contributions to our developing understanding of the phenotypic plasticity of migration timing to new conditions with climate change, where changes in the timing of nesting may expose juvenile birds to different photoperiods. We investigated the impact of manipulating photoperiod during nestling development in a long-distance migratory songbird on the timing of post-breeding movements in the wild. Using programmable lighting installed in the nest-boxes of purple martins (<em>Progne subis</em>), we exposed developing nestlings, from hatch to fledge date, to an extended photoperiod that matched the day length of the summer solstice in Manitoba, Canada. We found that birds with a simulated, earlier photoperiod had a longer nesting period and later fledge and autumn departure dates than control group birds. This study demonstrates the phenotypic plasticity of first-year birds to the ontogenetic effect of their hatch date in the formation of the timing of their first post-breeding movements. Further, we discuss how these results have implications for the potential use of assisted evolution approaches to alter migration timing to match new conditions with climate change.</p>
Migration-tracking integrated phylogeography supports long-distance dispersal-driven divergence for a migratory bird species in the Japanese archipelago
<p>Previous phylogeographic studies of migratory bird species have not discriminated long-distance dispersal (LDD) from vicariant speciation in their diversification process. We conducted an integrative phylogeographic approach to test the LDD hypothesis, which predicts that a Japanese migratory bird subspecies diverged from a population in the coastal region of the East China Sea (CRECS) via LDD over the East China Sea (ECS). We used the Brown Shrike as a model species, and we conducted molecular phylogenetics, species distribution models (SDMs) and migration tracking. We assessed whether the LDD hypothesis is applicable to the divergence history of the Japanese subspecies of the Brown Shrike.</p> <p>The datasets include three zipped files, namely DataS1.zip, DataS2.zip, and DataS3.zip. See the READ ME (AOKI_et_al_2021_DATASET_README.txt) for how each of the folder and files contained in them can be used to reproduce our results.</p> <p>DataS1.zip inlcudes an xml file to conduct the BEAST analysis. Molecular data, which include nucleotide sequences obtained for cytochrome b (cytb), cytochrome oxidase c subunit I (COI), myoglobin intron-2 (MB) and transforming growth factor beta 2 intron-5 (TGFb2), have been all reposited to DDBJ international nucleotide sequence database, and accession numbers have been already given to them. Accession numbers are provided in the appendix attached to the main manuscript.</p> <p>DataS2.zip includes several data that are related to produce occurrence data of the Brown Shrike used in the analysis and an R code to reproduce the SDMs. Explanatory climatic variables are all available at WorldClim v.1.4 (Hijmans et al., 2005), which are processed in the R code.</p> <p>DataS3.zip includes migratory route analyses using light-level geolocator data are available as the original light-level data and R codes. Sensitivity analyses were also conducted in these analyses, but their codes and results are seperately provided here.</p>
Autumn fueling behavior in passerines in relation to migratory distance and day length
<p>Songbirds have evolved diverse strategies to cope with seasonality, including long-, medium-, and short-distance migration. There is some evidence that birds with a longer migration distance deposit fuel faster. However, most studies focus on long-distance migrants. Comparisons between species with different migration distances are necessary to broaden our understanding of fueling capacity in migratory birds. We present maximum fuel deposition rates of five songbird species migrating along the southeast coast of Sweden in autumn with migration distances ranging from long (neotropical migrant) to short (partial/irruptive migrant) (Willow Warbler <em>P</em>. <em>trochilus</em>, Lesser Whitethroat <em>Curruca</em> <em>curruca</em>, Common Chiffchaff <em>Phylloscopus</em> <em>collybita</em>, European Robin <em>Erithacus</em> <em>rubecula</em>, and Blue Tit <em>Cyanistes</em> <em>caeruleus</em>). The birds were fed ad libitum in captivity and were exposed to either extended or natural daylength. All species ceased to increase in mass when they reached a certain fuel load, generally corresponding to migration distance, despite unlimited access to food and ample time for foraging. Blue Tits, Willow Warblers, and Lesser Whitethroats had the highest fuel deposition rates with extended daylength (19%, 20%, and 20%, respectively), and about 13% with natural daylength, which is comparable to the highest rates found in migratory songbirds in nature. European Robins and Common Chiffchaffs that winter in the temperate Mediterranean had the lowest fuel deposition rates (12% and 12% with extended daylength, respectively). Our results suggest that the long- and short-distance migrants in this study have developed an extreme capacity for rapid refueling for different reasons; speedy migration to distant wintering grounds or winter survival in Scandinavia. This study contributes to our current knowledge of maximum fuel deposition rates in different species and the limitations posed by daylength. We highlight the need for future studies of species with different migration strategies in order to draw broad conclusions about fueling strategies of migratory birds.</p>
Data from: The large-scale drivers of population declines in a long-distance migratory shorebird
Open the record for dataset details and reuse information.
Bergmann's rule is followed at multiple stages of post-embryonic development in a long-distance migratory songbird
Open the record for dataset details and reuse information.
Data from: Body condition explains migratory performance of a long-distance migrant
Open the record for dataset details and reuse information.
Data from: Impacts of nest predators and weather on reproductive success and population limitation in a long-distance migratory songbird
Open the record for dataset details and reuse information.
Data from: Range-wide populations of a long-distance migratory songbird converge during stopover in the tropics
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.