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402 results for “mtDNA”
Figure 6. Cicindela d. meriwetheri. A. and B in A morphological and mtDNA analysis of the badlands tiger beetle, Cicindela (s. str.) decemnotata Say, 1817 (Coleoptera: Carabidae: Cicindelinae) with the description of three new subspecies C. Barry Knisley
Figure 6. Cicindela d. meriwetheri. A. and B. Habitat and adult: Grand Coulee Airport, Grant Co., WA, 19-III- 2010. C. Adult: Grand Coulee Airport, Grant Co., Washington, 8-IX-2011.
Figure 22 in A morphological and mtDNA analysis of the badlands tiger beetle, Cicindela (s. str.) decemnotata Say, 1817 (Coleoptera: Carabidae: Cicindelinae) with the description of three new subspecies C. Barry Knisley
Figure 22. Seasonality of C. decemnotata populations based on collection records, C. d. decemnotata (blue line), C. d. bonnevillensis (red line) and C. d. montevolans (olive green line).
Figure 1. Cicindela d. decemnotata adult habitus. A. Adult, 15 in A morphological and mtDNA analysis of the badlands tiger beetle, Cicindela (s. str.) decemnotata Say, 1817 (Coleoptera: Carabidae: Cicindelinae) with the description of three new subspecies C. Barry Knisley
Figure 1. Cicindela d. decemnotata adult habitus. A. Adult, 15 mi. NE of Billings, Yellowstone Co., MT, 24-IV- 2011. B. Male, "CO: Garfield Co., RT 139, 2-VI-1991" (CSUC). C. Male, "WY: Big Horn Co., Lovell LTA, 02-IX-2000" (CSUC). D. Male, "ID: Caribou Co., N. of Canyon Rd., 30-VI-2007" (MGKC). Scale bar = 5mm for B–D.
Figure 7 in Diagnosability of mtDNA with Random Forests: Using sequence data to delimit subspecies
Figure 7. Summary of Random Forests classifications for each empirical comparison. Each row shows results from the stratum with the smallest fraction of individuals correctly classified, with comparisons labeled by their taxonomic codes as listed in Table 2. Colors identify comparison type as species (blue), subspecies (green), and populations (red). Points show the fraction of individuals correctly classified with probabilities> 50% (PD50, circles), and> 95% (PD95, triangles). Thin colored lines show 95% confidence intervals (CI) around PD50 estimates. Gray bars show range of a priori random classification rates based on individual size (left) to maximum possible classification rates based on shared haplotypes (right).
Figure 6 in Diagnosability of mtDNA with Random Forests: Using sequence data to delimit subspecies
Figure 6. Frequency distributions of the change in observed diagnosability (x-axis) in the simulated data for increasing levels of the probability of misstratification (vertical panels). Figures on the left and right columns are censored by data sets for original diagnosability ≤50% and>50%, respectively.
Figure 5 in Diagnosability of mtDNA with Random Forests: Using sequence data to delimit subspecies
Figure 5. Two-dimensional GAM fits of theta (Ɵ), number of migrants (Nem), and divergence time in generations (T) from Model 2 simulated data. From left to right, columns show results from models without migration (m = 0), with migration and Nem <1, and Nem ≥ 1. Colors indicate model prediction of percent correctly classified.
Figure 4 in Diagnosability of mtDNA with Random Forests: Using sequence data to delimit subspecies
Figure 4. GAM fit of number of migrants (Nem) from Model 2 parameters. Solid line shows median value of predicted percent correctly classified, and shaded area shows 95% CI. The switch from bimodal distribution to a normal distribution occurs at Nem = 1 (log10Nem = 0).
Figure 3 in Diagnosability of mtDNA with Random Forests: Using sequence data to delimit subspecies
Figure 3. Two-dimensional GAM fits of effective population size (Ne), divergence time in generations (T), and mutation rate (µ) from Model 1 simulated data. Results from models without migration to the left and those with migration to the right. Colors indicate model prediction of percent correctly classified.
Figure 1 in Diagnosability of mtDNA with Random Forests: Using sequence data to delimit subspecies
Figure 1. (A) Distribution of a hypothetical character for two putative subspecies (red and blue) demonstrating minimum overlap necessary to satisfy 75% rule of Amadon (1949). Character is continuous on the x-axis. Dashed lines indicate the point at which 75% of each distribution is outside of 99%+ of the other. Solid line indicates point of overlap where 97% of both distributions are outside one another. (B) Probability of membership to subspecies for specimens having values along the character axis. Probability is based on the ratio of the distribution frequencies at each point along the x-axis, with a 50:50 probability occurring at the threshold point.
Fig. 36 in COI mtDNA barcoding and morphology for the description of a new species of ricinuleid of the genus Pseudocellus (Arachnida: Ricinulei: Ricinoididae) from El Triunfo Biosphere Reserve, Chiapas, Mexico
Fig. 36. Species of the genus Pseudocellus Platnick, 1980 described from Chiapas, Mexico, including the new species described herein. Star: El Triunfo Biosphere Reserve, El Quetzal Camp, Angel Albino Corzo Municipality. Red circle: Cerro Boquerón, Ejido Boquerón, Motozintla Municipality. Orange circle: Sumidero del Camino, 16 km NE of Comitán. Pink circle: Kolem-chen Cave "Cueva Grande", Chan-kin Reserve, Ocosingo Municipality. Blue circle: San Francisco Cave, La Trinitaria Municipality. Purple circle: Finca Guatimoc, south slope of the Tacaná volcano, 32 km north of Tapachula, near Cacahuatán. Green circle: Las Abejas Cave, San Fernando Municipality.
Fig. 1 in COI mtDNA barcoding and morphology for the description of a new species of ricinuleid of the genus Pseudocellus (Arachnida: Ricinulei: Ricinoididae) from El Triunfo Biosphere Reserve, Chiapas, Mexico
Fig. 1. Neighbour-Joining (NJ) tree with p-distances constructed with COI barcode sequences from different specimens and species of Pseudocellus Platnick, 1980. Colors of the branches indicate species of Pseudocellus already described, red branches indicate the new species. Numbers on the branches represent Bootstrap support values (>50% significant).
Figs 32–35 in COI mtDNA barcoding and morphology for the description of a new species of ricinuleid of the genus Pseudocellus (Arachnida: Ricinulei: Ricinoididae) from El Triunfo Biosphere Reserve, Chiapas, Mexico
Figs 32–35. Pseudocellus giribeti sp. nov. Paratypes (MCZ 80010). 32–33. Deutonymph, habitus, dorsal and ventral views. 34–35. Tritonymph, habitus, dorsal and ventral views. Scale bars = 2 mm.
Figs 20–26 in COI mtDNA barcoding and morphology for the description of a new species of ricinuleid of the genus Pseudocellus (Arachnida: Ricinulei: Ricinoididae) from El Triunfo Biosphere Reserve, Chiapas, Mexico
Figs 20–26. Pseudocellus giribeti sp. nov. Holotype, ♂ (MCZ 80010). 20–22. Right leg III (copulatory apparatus), retrolateral, prolateral and dorsal views. 23. Copulatory apparatus extended, prolateral view. 24. Copulatory apparatus, dorsal view. 25. Copulatory apparatus, prolateral view. 26. Tarsal process, distal half, prodorsal view. Scale bars: 20–22 = 0.5 mm; 23–25 = 0.2 mm; 26 = 0.1 mm.
Figs 7–10 in COI mtDNA barcoding and morphology for the description of a new species of ricinuleid of the genus Pseudocellus (Arachnida: Ricinulei: Ricinoididae) from El Triunfo Biosphere Reserve, Chiapas, Mexico
Figs 7–10. Pseudocellus giribeti sp. nov. Holotype, ♂ (MCZ 80010). 7–8. Opisthosoma, dorsal and ventral views. 9. Tergite XI, median plate (arrow indicates the lateral depression). 10. Pygidium, posterior view. Scale bars: 7–8 = 1 mm; 9 = 0.5 mm; 10 = 0.2 mm.
Figs 3–6 in COI mtDNA barcoding and morphology for the description of a new species of ricinuleid of the genus Pseudocellus (Arachnida: Ricinulei: Ricinoididae) from El Triunfo Biosphere Reserve, Chiapas, Mexico
Figs 3–6. Pseudocellus giribeti sp. nov. Holotype, ♂ (MCZ 80010). 3–4. Habitus, dorsal and ventral views. 5. Carapace, dorsal view. 6. Prosoma, ventral view, showing coxosternal region. Scale bars: 3–4 = 2 mm; 5–6 = 0.5 mm.
FIGURE 2 in Late Pleistocene and Holocene pikas (Mammalia, Lagomorpha) from Europe and the validity of Ochotona spelaea: New insights based on mtDNA analysis
FIGURE 2. Haplotype network of species of the genus Ochotona based on the analysis of cytochrome b mtDNA sequences.
FIGURE 1 in Late Pleistocene and Holocene pikas (Mammalia, Lagomorpha) from Europe and the validity of Ochotona spelaea: New insights based on mtDNA analysis
FIGURE 1. Phylogenetic tree of the genus Ochotona based on the analysis of cytochrome b mtDNA sequences.
Fig. 3. Phylogenetic trees from reported 18S in Molecular systematics analysis of Lymantria dispar based on 18S rRNA and cox1 mtDNA sequence data
Fig. 3. Phylogenetic trees from reported 18S rRNA genes of insects according to NJ. A. Based on sequences of full-length. B. Based on second conserved region.
Fig. 4 in Molecular systematics analysis of Lymantria dispar based on 18S rRNA and cox1 mtDNA sequence data
Fig. 4. Phylogenetic trees based on partial sequences from reported cox1 genes of insects according to NJ.
Fig.1 in Molecular systematics analysis of Lymantria dispar based on 18S rRNA and cox1 mtDNA sequence data
Fig.1. PCR result of 18S rRNA of Lymantria dispar. Separated bands (from left to right). 18S1, 18S2, 18S rRNA, DL2000 marker.
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Allen Brain Atlas
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International Brain Laboratory public data
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OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.