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zenodo40/100

FIGURE 9 in Shrimps of the genus Periclimenes (Crustacea, Decapoda, Palaemonidae) associated with mushroom corals (Scleractinia, Fungiidae): linking DNA barcodes to morphology

FIGURE 9 Periclimenes subcorallum sp. nov., ovigerous female holotype (pocl. 1.50 mm), MZB CRU 4968. Habitus. Scale = 2 mm.

opencc-by-4.0Jun 2019View details →
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FIGURE 2 Periclimenes diversipes Kemp, 1922, major second pereiopod. A, ovigerous female pocl. 1.63 in Shrimps of the genus Periclimenes (Crustacea, Decapoda, Palaemonidae) associated with mushroom corals (Scleractinia, Fungiidae): linking DNA barcodes to morphology

FIGURE 2 Periclimenes diversipes Kemp, 1922, major second pereiopod. A, ovigerous female pocl. 1.63 mm, left P2, RMNH.CRUS.D.57551, GenBank MK843282; B, ovigerous female pocl. 1.25 mm, right P2, RMNH. CRUS.D.57547, GenBank MK843284; C, female pocl. 1.25 mm, left P2, RMNH.CRUS.D.57548, GenBank MK843295; D, male, pocl 1.38 mm, right P2, RMNH.CRUS.57553, GenBank MK843283. Downloaded from Brill.com 12/12/2023 03:02:30PM Scale bar = 0.4 mm. via Open Access. This is an open access article distributed under the terms of the prevailing CC-BY license at the time of publication. https://creativecommons.org/licenses/by/4.0/

opencc-by-4.0Jun 2019View details →
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FIGURE 8 in Shrimps of the genus Periclimenes (Crustacea, Decapoda, Palaemonidae) associated with mushroom corals (Scleractinia, Fungiidae): linking DNA barcodes to morphology

FIGURE 8 Mushroom coral cladogram based on published phylogenetic analyses (Gittenberger et al., 2011; Benzoni et al., 2012). The host relations of five Periclimenes species (table 3) are projected on the phylogeny reconstruction as well as the morphological traits "attached vs. free-living mode of life" (A = attached / F = free-living) and maximum recorded corallum size (Hoeksema, 1991, 2012a, 2014; Gittenberger et al., 2011) with size categories (S = small, <15 cm; M = medium, ≥15 cm and <25 cm; L = large, ≥25 cm). P. div = Periclimenes diversipes, P. gon = Periclimenes gonioporae Downloaded, P. jug = from Brill Periclimenes.com 12/ jugalis 12/, P 2023. wat03=:02:30PM Periclimenes watamuae, P. sub via=Open Periclimenes Access. This subcorallum is an sp open. nov. access article distributed under the terms of the prevailing CC-BY license at the time of publication. https://creativecommons.org/licenses/by/4.0/

opencc-by-4.0Jun 2019View details →
dryad40/100

Data from: Tissue-specific O-GlcNAcylation profiling identifies substrates in translational machinery in the Drosophila mushroom body contributing to olfactory learning

<p><em>O-</em>GlcNAcylation is a dynamic post-translational modification that diversifies the proteome. Its dysregulation is associated with neurological disorders that impair cognitive function, and yet identification of phenotype-relevant candidate substrates in a brain-region-specific manner remains unfeasible. By combining an <em>O-</em>GlcNAc binding activity derived from<em> Clostridium perfringens</em> OGA (<em>Cp</em>OGA) with TurboID proximity labeling in <em>Drosophila</em>, we developed an <em>O-</em>GlcNAcylation profiling tool that translates <em>O-</em>GlcNAc modification into biotin conjugation for tissue-specific candidate substrates enrichment. We mapped the <em>O-</em>GlcNAc interactome in major brain regions of <em>Drosophila</em> and found that components of the translational machinery, particularly ribosomal subunits, were abundantly <em>O-</em>GlcNAcylated in the mushroom body of <em>Drosophila</em> brain. Hypo-<em>O-</em>GlcNAcylation induced by ectopic expression of active <em>Cp</em>OGA in the mushroom body decreased local translational activity, leading to olfactory learning deficits that could be rescued by dMyc overexpression-induced increase of protein synthesis. Our study provides a useful tool for future dissection of tissue-specific functions of <em>O-</em>GlcNAcylation in <em>Drosophila</em> and suggests a possibility that <em>O-</em>GlcNAcylation impacts cognitive function via regulating regional translational activity in the brain.</p>

opencc-zeroApr 2024View details →
zenodo40/100

Local communities' perceptions of wild edible plant and mushroom change: A systematic review

<p>These datasets are the basis of publication &quot;Local communities&rsquo; perceptions of wild edible plant and mushroom change: A systematic review&quot;, DOI: https://doi.org/10.1016/j.gfs.2021.100601<br> File GFS_paperIDs.csv lists the articles that are included in the systematic review with their identification numbers.<br> File GFS_data_papers.csv contains data related to the articles reporting on changes of wild edible plants.<br> File GFS_data_plants.csv contains data related to the plant species that are affected by the changes.<br> File GFS_variable_desriptions.txt informs about the variables in files GFS_data_papers.csv and&nbsp;GFS_data_plants.csv.</p>

opencc-by-4.0Mar 2022View details →
zenodo40/100

Text-fig. 5. SRXTM images of Miranthus elegans gen. et sp. nov.; Mira locality, Portugal. a, b: Transverse sections of flower (a, orthoslice xy0665 close to the apex of placenta; b, orthoslice xy0800 in middle part of placenta) showing remains of calyx with distinct bundles (arrows), ovary wall (ow) and numerous ovules (ov) on the central mushroom-shaped globose placenta (pl) with central column (cc). c: Transverse section of flower (orthoslice xy0620) through perianth and ovary (ow) at a level above the placenta showing ovules (ov) and cellular preservation of the sepal bundles (arrows shown for one sepal); note abaxial surface of sepals with thick-walled epidermal cells, thick cuticle, and fine pointed verrucae. d: Longitudinal section of flower (orthoslice xz0500) showing perigynous position of calyx and semi-inferior ovary (ow, ovary wall) with a central placenta (pl), central column (cc) and numerous ovules (ov); note spiny verrucae on abaxial surface of calyx lobes. Specimens, Mira 100-S153145 (a, b), Mira 100-S170155 (c, d, holotype). Scale bars = 600 µm (a–d). in Early Flowers Of Primuloid Ericales From The Late Cretaceous Of Portugal And Their Ecological And Phytogeographic Implications

Text-fig. 5. SRXTM images of Miranthus elegans gen. et sp. nov.; Mira locality, Portugal. a, b: Transverse sections of flower (a, orthoslice xy0665 close to the apex of placenta; b, orthoslice xy0800 in middle part of placenta) showing remains of calyx with distinct bundles (arrows), ovary wall (ow) and numerous ovules (ov) on the central mushroom-shaped globose placenta (pl) with central column (cc). c: Transverse section of flower (orthoslice xy0620) through perianth and ovary (ow) at a level above the placenta showing ovules (ov) and cellular preservation of the sepal bundles (arrows shown for one sepal); note abaxial surface of sepals with thick-walled epidermal cells, thick cuticle, and fine pointed verrucae. d: Longitudinal section of flower (orthoslice xz0500) showing perigynous position of calyx and semi-inferior ovary (ow, ovary wall) with a central placenta (pl), central column (cc) and numerous ovules (ov); note spiny verrucae on abaxial surface of calyx lobes. Specimens, Mira 100-S153145 (a, b), Mira 100-S170155 (c, d, holotype). Scale bars = 600 µm (a–d).

opencc-by-4.0Dec 2021View details →
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Text-fig. 7. SEM (a) and SRXTM (b–e) images of Miranthus kvacekii sp. nov.; Mira locality, Portugal. a: Lateral view of flower bud showing corolla lobes extending beyond calyx; note surface of pedicel, calyx and corolla with small equiaxial epidermal cells and indumentum of densely spaced, short stiff trichomes. b, c: Longitudinal sections through floral bud in two directions perpendicular to each other (a, orthoslice yz1024; b, orthoslice xz0950) showing corolla (co), calyx (ca), stamens (st) and semi-inferior ovary with thin ovary wall (ow) and central mushroom-shaped globose placenta (pl) bearing numerous ovules (ov). d, e: Transverse sections through floral bud above placenta (d, orthoslice xy0915; e, orthoslice xy1095) showing calyx (ca), corolla (co), ovary wall (ow) and ovules (ov); yellow outlines indicate the positions of anthers (d) and filaments (e); orange outlines indicate the position of three of the possible staminodes. Specimen, Mira 100-S170157 (a–e, holotype). Scale bars = 600 µm (a–c), 300 µm (d, e). in Early Flowers Of Primuloid Ericales From The Late Cretaceous Of Portugal And Their Ecological And Phytogeographic Implications

Text-fig. 7. SEM (a) and SRXTM (b–e) images of Miranthus kvacekii sp. nov.; Mira locality, Portugal. a: Lateral view of flower bud showing corolla lobes extending beyond calyx; note surface of pedicel, calyx and corolla with small equiaxial epidermal cells and indumentum of densely spaced, short stiff trichomes. b, c: Longitudinal sections through floral bud in two directions perpendicular to each other (a, orthoslice yz1024; b, orthoslice xz0950) showing corolla (co), calyx (ca), stamens (st) and semi-inferior ovary with thin ovary wall (ow) and central mushroom-shaped globose placenta (pl) bearing numerous ovules (ov). d, e: Transverse sections through floral bud above placenta (d, orthoslice xy0915; e, orthoslice xy1095) showing calyx (ca), corolla (co), ovary wall (ow) and ovules (ov); yellow outlines indicate the positions of anthers (d) and filaments (e); orange outlines indicate the position of three of the possible staminodes. Specimen, Mira 100-S170157 (a–e, holotype). Scale bars = 600 µm (a–c), 300 µm (d, e).

opencc-by-4.0Dec 2021View details →
zenodo40/100

Figure 10 in Mushroom art in South Africa and Zimbabwe - Emil Holub: 1847-1902

Figure 10. From left to right, Holub Numbers 458, 459 and 460: Agaricus trisulphuratus; no.4 61: Podoscypha? Ascomycete? Omphalina- like?; no. 462: Leucoagaricus; no. 466: Pluteus? Entoloma? Mycena?

opencc-by-4.0Oct 2021View details →
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Figure 9 in Mushroom art in South Africa and Zimbabwe - Emil Holub: 1847-1902

Figure 9 shows six different species of 'Sponge mushrooms of the Leshoma Valley.' Number 439 looks like the ectomycorrhizal Cantharellus miomboensis Buyck &amp; V.Hofst. 2012 with a roughly textured stipe. The mushroom depicted as no. 440 is possibly another Laccaria in mid-stage of growth. As Holub linked numbers 440 and 445 with curled brackets and 'a'–'b', these may be the same mushroom at different stages. This genus is known to be very variable in Europe (A. Verbeken, pers. comm.) but there is limited information on the indigenous species (Sharp, unpublished). On its own, no. 445 has similarities to Cantharellus platyphyllus Heinem. 1966 or Cantharellus splendens Buyck 1994 and to Lepista, so it is hard to ascertain the precise identity. Number 446 with its twisted stipe is likely to be Marasmius or Collybia. Number 447 is possibly an Entoloma or Marasmius, while no. 444 is an Agaricus.

opencc-by-4.0Oct 2021View details →
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Figure 6. Holub numbers 41 and 42 in Mushroom art in South Africa and Zimbabwe - Emil Holub: 1847-1902

Figure 6. Holub numbers 41 and 42: Agaricus; numbers 47, 48, 49 and 50: Termitomyces; duplicated no. 47: Coprinus comatus.

opencc-by-4.0Oct 2021View details →
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Figure 3 in Mushroom art in South Africa and Zimbabwe - Emil Holub: 1847-1902

Figure 3 (Holub numbers 22, 23, 24), shows a characteristic termite fungus, Termitomyces. The details of the rough cap surface suggest that this is possibly Termitomyces sagittiformis (Kalchbr. &amp; Cooke) D.A.Reid 1975 (Van der Westhuizen &amp; Eicker 1994), although Termitomyces umkowaan (Cooke &amp; Massee) D.A.Reid 1975 may also develop a cracked cap with age. Both species have a swollen base to the stipe before narrowing into a black pseudorrhiza as shown in Holub's illustration. A more precise identification to species is therefore not possible. The location of this specimen is given as 'Found in the sand of the swampy tributary… [west…] Dr Moffat's salt pans'. These pans are marked on Holub's map, west of the Harts River near Mamusa. 'The biggest figure is a fully grown sponge, the white of the mushroom blending into yellowish…the gills are white…grows with termite mounds.' Unfortunately, the rest of the annotation is indecipherable.

opencc-by-4.0Oct 2021View details →
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Figure 3 in Ameliorative effects of morel mushroom (Morchella esculenta) against Cadmium-induced reproductive toxicity in adult male rats

Figure 3. Photomicrograph of seminiferous tubules. (A) Control; showing compact tubules, filled lumen with spermatid, normal germ cell proliferation along epithelium; (B) Cd treated group; showing tubules with empty lumen and degenerated epithelial layer with increased interstitial space; (C) Cd+10 mg extract treated group &amp; (D) Cd+ 20 mg extract treated group; showing minimal damage to epithelium, lumen filled with spermatid and less interstitial space; (E) 10 mg extract alone group and (F) 20 mg extract alone group; showing narrow lumen, increased epithelial height and compact tubules with less interstitial space. Magnification x40. Spermatogonia (SP), Elongated spermatids (ES), Interstitial space (IS), Epithelium (E).

opencc-by-4.0Dec 2022View details →
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Figure 5 in Ameliorative effects of morel mushroom (Morchella esculenta) against Cadmium-induced reproductive toxicity in adult male rats

Figure 5. Mean ± SEM of plasma testosterone (ng/ml) concentration in rats of control, Cadmium, Cd + 10 mg of extract, Cd +20 mg extract, 10 mg extract and 20 mg extract group. (All values are expressed as Mean ± SEM) (*= P&lt;0.05, ** P&lt;0.01, *** P &lt;0.001, a=control, b= Cadmium, c= Cd+10 mg extract).

opencc-by-4.0Dec 2022View details →
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Figure 4 in Ameliorative effects of morel mushroom (Morchella esculenta) against Cadmium-induced reproductive toxicity in adult male rats

Figure 4. photomicrograph of cross section of epididymis (cauda) of rats (H&amp;E, 40X) from: (A) Control group; showing normal morphology of cauda epididymis showing compactly arranged tubules with thick epithelium, lumen filled with sperm; (B) Cadmium group; showing marked changes in structure of tubule with decreased concentration of sperm; (C) Cd+10 mg extract group &amp; (D) Cd+ 20 mg extract group; showing regular arrangement of tubules surrounded by stroma, lumen filled with spermatozoa; (E) 10 mg extract alone group and (F) 20 mg extract alone group; showing increase in epithelium an lumen sperm concentration. Spermatozoa (S), Epithelium (E), Stroma (St). G, H and I summarizes the variations in tubule and lumen diameter and height of epithelium.

opencc-by-4.0Dec 2022View details →
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Figure 1 in Ameliorative effects of morel mushroom (Morchella esculenta) against Cadmium-induced reproductive toxicity in adult male rats

Figure 1. experimental design showing that the control group is treated with ip dosage of saline, 3 groups are treated with ip dosage of Cd, in which 2 received oral dosage of ME, and final 2 groups received oral gavage of ME alone (ME= Morchella esculenta).

opencc-by-4.0Dec 2022View details →
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Figure 2 in Ameliorative effects of morel mushroom (Morchella esculenta) against Cadmium-induced reproductive toxicity in adult male rats

Figure 2. Fluorescent photomicrograph of sperm DNA, using comet assay, stained with acridine orange. (A) control with more intact DNA; (B) cadmium group with comets; (C) Cd + 10 mg extract group showing intact DNA with a very short tail length; (D) Cd +20 mg extract group having tail of long length and intact DNA; (E) 10 mg extract alone group in which a tail could be notice but very lesser DNA damage was found; (F) 20 mg extract alone group having short tails and intact DNA.

opencc-by-4.0Dec 2022View details →
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Figs 1-2 in List of beetles (Coleoptera) associated with the oyster mushroom, Pleurotus ostreatus Fr., in the Onon-Balj National Park of Mongolia

Figs 1-2. Pleurotus ostreatus in the Birch Forest of Onon-Balj National Park. 1. Pleurotus ostreatus. 2. Birch Forest.

opencc-by-4.0Aug 2014View details →
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Figs. 3-6 in List of beetles (Coleoptera) associated with the oyster mushroom, Pleurotus ostreatus Fr., in the Onon-Balj National Park of Mongolia

Figs. 3-6. Fungivorous beetles associated with Pleurotus ostreatus in the Birch Forest of Onon-Balj National Park. 3. Mycetophagus antennatus, Mycetophagidae. 4. Litargus japonicus, Mycetophagidae. 5. Pseudamblyopus similis, Erotylidae. 6. Dacne bipustulata, Erotylidae.

opencc-by-4.0Aug 2014View details →
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Fig. 2 in The impact of meteorological parameters on the biological productivity of mycorrhizal mushrooms in Eastern Siberia

Fig. 2. The variation of total amount of month precipitations *** in August and biological productivity**** of mushrooms in different years. *** ­ variation of total amount of month precipitations, **** ­ biological productivity

opencc-by-4.0Aug 2015View details →
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Fig. 1 in The impact of meteorological parameters on the biological productivity of mycorrhizal mushrooms in Eastern Siberia

Fig. 1. The variation of average month temperature * of soil at a depth of 40 cm below the natural cover in August and biological productivity** of mushrooms in different years. * ­ variation of average month temperature, ** ­ biological productivity, *** ­ 1 centner = 100 kilograms (a centner is a metric unit of mass equal to one hundred kilograms).

opencc-by-4.0Aug 2015View details →

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Allen Brain Atlas

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allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record