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176 results for “naturalistic”
Figure 3 in Hermann Karsten (1817-1908): a German naturalist in the Neotropics and the significance of his paleovertebrate collection
Figure 3. "Ground sloth" specimens. (a–b) Eremotherium laurillardi right unciform (MB.Ma. 42937) and (c–s) cf. Eremotherium laurillardi (c–m) Five fragmentary molariforms (MB.Ma. 33534); (n) distal fragment of left humerus, (MB.Ma. 48085); (o–p) distal fragment of left tibia (MB.Ma. 42903); (q) humeral head of indet. laterality (MB.Ma. 42936); (r–s) distal fragment of right ulna (MB.Ma. 42935). Scale bar equals 2 cm.
Figure 1 in Hermann Karsten (1817-1908): a German naturalist in the Neotropics and the significance of his paleovertebrate collection
Figure 1. Portrait of Hermann Karsten. Picture courtesy of Stadtarchiv Schaffhausen (Biographien Sammlung der Naturforschenden Gesellschaft Schaffhausen), Switzerland.
Stimuli examples for Object-based attention in complex, naturalistic auditory streams
<p>This is an example collection of stimuli used to study Object-based attention in complex, naturalistic auditory streams. The stimuli consist of single auditory streams of speech signals and environmental sounds signals that can contain a repetition of 750ms (starting name "target")or not (starting name "clean"). Two sounds stimuli, one with repetition and one without were randomly overlapped to form an auditory scene of two speech streams (starting name "sceneSS") or one speech and one environmental stream (starting name "sceneSE"). </p>
Figure 2 in Prof. Dr. Claudio Gilberto Froehlich, a naturalistic legacy overcoming the biodiversity knowledge shortfalls
Figure 2 Distribution map of the new species described in the special issue in honor of Prof. Dr. Claudio Gilberto Froehlich.
Data from: Wasted efforts impair random search efficiency and reduce choosiness in mate-pairing termites. American Naturalist
<div> <h1>README</h1> <a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/tree/main#readme"></a></div> <div> <h2>Article Information</h2> <a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/tree/main#article-information"></a></div> <p>This repository provides access to the data and source code used for the manuscript</p> <div> <h3><strong>Wasted efforts impair random search efficiency and reduce the level of choosiness in mate-pairing termites</strong></h3> <a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/tree/main#wasted-efforts-impair-random-search-efficiency-and-reduce-the-level-of-choosiness-in-mate-pairing-termites"></a></div> <div> <h4>Nobuaki Mizumoto, Naohisa Nataya, Ryusuke Fujisawa</h4> <a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/tree/main#nobuaki-mizumoto-naohisa-nataya-ryusuke-fujisawa"></a></div> <p>Contact, Nobuaki Mizumoto: <a href="mailto:nzm0095@auburn.edu">nzm0095@auburn.edu</a></p> <p>This paper is accepted at The American Naturalist.<br>Preprint is available at <a href="http://img.shields.io/badge/DOI-10.1101/2024.02.01.578198.svg" rel="nofollow">bioRxiv</a>.</p> <p>This study examines how movement patterns of mate searchers of a termite <em>Reticulitermes speratus</em> changes according to time. Then investigated how this change in movement patterns affect random search efficiency and mate choice behavior.<br>This includes tracking data, R codes to analyze it, and Cpp code for simulations.</p> <div> <h2>Table of Contents</h2> <a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/tree/main#table-of-contents"></a></div> <ul> <li><a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/blob/main/README.md">README</a></li> <li><a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/blob/main/analysis/scripts">scripts</a> <ul> <li><a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/blob/main/analysis/scripts/output.R">output.R</a> - output all results</li> <li><a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/blob/main/analysis/scripts/processing.R">processing.R</a> - data processing of coordinates obtained from servosphere</li> <li><a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/blob/main/analysis/scripts/simulations.R">simulations.R</a> - for data-based simulations</li> <li><a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/blob/main/analysis/scripts/onesim.cpp">onesim.cpp</a> - functions for simulations</li> </ul> </li> <li><a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/blob/main/analysis/output">output</a> - all outputs are stored</li> <li><a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/blob/main/analysis/data">data</a> <ul> <li><a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/blob/main/analysis/data/raw">raw</a> - raw data in .csv <ul> <li><a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/blob/main/analysis/data/raw/ANTAM_4day">ANTAM_4day</a> - directory includes raw data obtained from servosphere. Ignore the first four columns. col4: x, col5: y, col6: time</li> <li><strong>colonyfoundation.csv</strong> - data for colony foundation experiments.</li> <li><strong>tandem_sum.csv</strong> - the number of observations of individual units in each experiment. units include solomale (single male), solofemale (single female), heterotandem (female-male tandem), male tandem (male-male tandem), female tandem (female-female tandem), and tandem3 (tandem run with >= 3 individuals).</li> <li><strong>tandem_timedevelopment.csv</strong> - breakdown of tandem_sum.csv. The measurement was not summarized but for each observation bouts (5: 0-5 min, 10: 5-10 min, ...).</li> <li><strong>termite_weight.csv</strong> - Termite weight measurement. fresh: fresh weight in mg.</li> </ul> </li> <li><a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/blob/main/analysis/data/fmt">fmt</a> - formatted data created in processing.R and simulations.R. The formatted data will be used for output.R. The all formatted data are in .rda files. The .csv files with the same contents are also generated for reviewing purpose. <ul> <li><strong>df_all.rda</strong> - The processed data of trajectories for furthur analysis. It has three datafrmaes named df_all (trajectories with traveled distance information for each frame), df_MSD (MSD data for each individual), df_pause (duration of pauses for each pausing events for each individual). The corresponding csv files are df_all.csv, df_MSD.csv, and df_pause.csv</li> <li><strong>df_sum.rda</strong> - The file further processed df_all.rda to summarize all parameters for each individual. df_sum.csv is corresponding.</li> <li><strong>df_sim.rda</strong> - The simulation results that record encounter time for each searching attempts. encounter_time = 1501 indicates the failure to encounter. df_sim.csv is corresponding.</li> </ul> </li> </ul> </li> </ul> <div> <h2>Session information</h2> <a href="https://github.com/nobuaki-mzmt/termite-mate-search-cost/tree/main#session-information"></a></div> <div> <pre><code>R version 4.3.1 (2023-06-16 ucrt) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 11 x64 (build 22621) Matrix products: default locale: [1] LC_COLLATE=English_United States.utf8 [2] LC_CTYPE=English_United States.utf8 [3] LC_MONETARY=English_United States.utf8 [4] LC_NUMERIC=C [5] LC_TIME=English_United States.utf8 time zone: Asia/Tokyo tzcode source: internal attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] CircStats_0.2-6 boot_1.3-28.1 MASS_7.3-60 [4] stringr_1.5.0 survival_3.5-5 survminer_0.4.9 [7] ggpubr_0.6.0 Rcpp_1.0.10 PupillometryR_0.0.5 [10] rlang_1.1.1 dplyr_1.1.2 viridis_0.6.3 [13] viridisLite_0.4.2 ggplot2_3.4.2 Rmisc_1.5.1 [16] plyr_1.8.8 lattice_0.21-8 exactRankTests_0.8-35 [19] car_3.1-2 carData_3.0-5 lme4_1.1-34 [22] Matrix_1.6-1 data.table_1.14.8 </code></pre> </div>
Figure 9 in Not just a taxonomist, but a naturalist! The foundations of "Froehlich's Autonomous Stonefly Republic"
Figure 9 CGH on his 90th birthday, Ribeirão Preto, São Paulo, Brazil, 2017 (photograph by Augusto Froehlich).
Figure 8 in Not just a taxonomist, but a naturalist! The foundations of "Froehlich's Autonomous Stonefly Republic"
Figure 8 Number of species and articles authored by Prof. Dr. C. G. Froehlich. A, accumulative curves of the number of publications (red) and species (blue). B, number of publications (red) and species (blue) in periods of five years.
Figure 4 in Not just a taxonomist, but a naturalist! The foundations of "Froehlich's Autonomous Stonefly Republic"
Figure 4 The legacy of Prof. Dr. C. G. Froehlich is reflected in several new Brazilian research centers. M.Sc. students (in yellow) and Ph.D. students (in green) advised by him are represented by the initial letters of each name. São Paulo state is magnified. The list of the full name and their respective initials is provide at the Table 2.
Figure 3 in Not just a taxonomist, but a naturalist! The foundations of "Froehlich's Autonomous Stonefly Republic"
Figure 3 The foundation of "Froehlich's Autonomous Stonefly Republic". A, Claudio G. Froehlich (CGF), his Ph.D. students Adolfo R. Calor (ARC) and Rodolfo Mariano (RM), and Dr. Eduardo Domínguez (ED) in a collection expedition at the Estação Biológica de Boracéia (EBB/USP), Salesópolis, São Paulo, Brazil, 2007; B, CGF in his classic undergraduate course "Aquatic Entomology" at the EBB/USP, 2005; CGF, his PhD students ARC and RM, and ED in a light trap collect, 2007; CGF and ED in Venerando river, in EBB, collecting stoneflies and mayflies.
Figure 1 in Not just a taxonomist, but a naturalist! The foundations of "Froehlich's Autonomous Stonefly Republic"
Figure 1 Prof. Dr. C. G. Froehlich's professional career timeline, with some significant events highlighted in the photographs.
Figure 6 A, The 6 in Not just a taxonomist, but a naturalist! The foundations of "Froehlich's Autonomous Stonefly Republic"
Figure 6 A, The 6th International Symposium on Plecoptera, Schlitz, Germany 1977.; B, The 7th International Symposium on Plecoptera, Nara, Japan 1980.
Figure 2 in Not just a taxonomist, but a naturalist! The foundations of "Froehlich's Autonomous Stonefly Republic"
Figure 2 Awards received by Prof. Dr. C. G. Froehlich. A, Lifetime Achievement Award, offered by International Association of Plecopterologists, XII International Symposium on Plecoptera, Tucumán, Argentina (1998); B, Plate offered by students and colleagues for the outstanding contribution to Neotropical Aquatic Entomology, 3rd Symposium on Neotropical Aquatic Insects, Ribeirão Preto, Brazil (2015).
Figure 5 A in Not just a taxonomist, but a naturalist! The foundations of "Froehlich's Autonomous Stonefly Republic"
Figure 5 A, Prof. Claudio Froehlich at the Museum of Zoology of University of São Paulo (MZUSP) in 1969, São Paulo, Brazil; B, CGF at the 4th International Symposium on Plecoptera, Abisko, Swedish Lapland, 1968; C, CGF and Marlene Sofia Arcifa Froehlich at the XIII International Symposium on Plecoptera, Tafí de Valle, Tucumán, Argentina, August 1998; D, CGF and Oliver Flint, both were honored at the III Symposium on Neotropical Aquatic Insects, Ribeirão Preto, São Paulo, Brazil, 2015; E, CGF in a collection expedition at the Estação Biológica de Boracéia (EBB/USP), Salesópolis, São Paulo, Brazil, 2006.
Figure 7 A, 9 in Not just a taxonomist, but a naturalist! The foundations of "Froehlich's Autonomous Stonefly Republic"
Figure 7 A, 9th International Conference on Ephemeroptera & 13th International Symposium on Plecoptera, Tafí de Valle, Tucumán 16–21 August 1998; B, 15th International Conference on Ephemeroptera & 19 International Symposium on Plecoptera, Aracruz, Brazil 3–8 June 2018.
Linked collectors and determiners for: Herbarium specimens of Association des Naturalistes de la Vallée du Loing (ANVL).
Natural history specimen data linked to collectors and determiners held within, "Herbarium specimens of Association des Naturalistes de la Vallée du Loing (ANVL)". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/615ef65c-061a-4494-99b0-66e0e688afef">https://bionomia.net/dataset/615ef65c-061a-4494-99b0-66e0e688afef</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/615ef65c-061a-4494-99b0-66e0e688afef">https://gbif.org/dataset/615ef65c-061a-4494-99b0-66e0e688afef</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: Collection of myxomycetes of Young Naturalists Circle of Zoological Museum of Moscow State University.
Natural history specimen data linked to collectors and determiners held within, "Collection of myxomycetes of Young Naturalists Circle of Zoological Museum of Moscow State University". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/25a7f866-6262-41f9-a5e5-c44829ea7c3e">https://bionomia.net/dataset/25a7f866-6262-41f9-a5e5-c44829ea7c3e</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/25a7f866-6262-41f9-a5e5-c44829ea7c3e">https://gbif.org/dataset/25a7f866-6262-41f9-a5e5-c44829ea7c3e</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: CardObs : Observations naturalistes issues de l'outil de saisie et gestion CardObs mis en place par le Service du Patrimoine Naturel (MNHN) / UMS PatriNat (OFB - CNRS - MNHN) - Données naturalistes de BRUGEROLLES Yvan.
Natural history specimen data linked to collectors and determiners held within, "CardObs : Observations naturalistes issues de l'outil de saisie et gestion CardObs mis en place par le Service du Patrimoine Naturel (MNHN) / UMS PatriNat (OFB - CNRS - MNHN) - Données naturalistes de BRUGEROLLES Yvan". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/64b8d302-77a6-4131-9f87-f8409290c807">https://bionomia.net/dataset/64b8d302-77a6-4131-9f87-f8409290c807</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/64b8d302-77a6-4131-9f87-f8409290c807">https://gbif.org/dataset/64b8d302-77a6-4131-9f87-f8409290c807</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: From the shadows of the past: Moricand senior and junior, two 19 th century naturalists from Geneva, with their newly described taxa and molluscan types.
Natural history specimen data linked to collectors and determiners held within, "From the shadows of the past: Moricand senior and junior, two 19 th century naturalists from Geneva, with their newly described taxa and molluscan types". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/59e37f50-05dc-43e2-9954-f33875cbb0c6">https://bionomia.net/dataset/59e37f50-05dc-43e2-9954-f33875cbb0c6</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/59e37f50-05dc-43e2-9954-f33875cbb0c6">https://gbif.org/dataset/59e37f50-05dc-43e2-9954-f33875cbb0c6</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: CardObs : Observations naturalistes issues de l'outil de saisie et gestion CardObs mis en place par le Service du Patrimoine Naturel (MNHN) / UMS PatriNat (OFB - CNRS - MNHN) - KARUHET : Hétéroptères de Guadeloupe.
Natural history specimen data linked to collectors and determiners held within, "CardObs : Observations naturalistes issues de l'outil de saisie et gestion CardObs mis en place par le Service du Patrimoine Naturel (MNHN) / UMS PatriNat (OFB - CNRS - MNHN) - KARUHET : Hétéroptères de Guadeloupe". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/e1b5fd93-dbbd-4989-91e0-ba906332aeb6">https://bionomia.net/dataset/e1b5fd93-dbbd-4989-91e0-ba906332aeb6</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/e1b5fd93-dbbd-4989-91e0-ba906332aeb6">https://gbif.org/dataset/e1b5fd93-dbbd-4989-91e0-ba906332aeb6</a>. Formatted as a Frictionless Data package.
Linked collectors and determiners for: CardObs : Observations naturalistes issues de l'outil de saisie et gestion CardObs mis en place par le Service du Patrimoine Naturel (MNHN) / UMS PatriNat (OFB - CNRS - MNHN) - Données naturalistes de BARRIER Yannick.
Natural history specimen data linked to collectors and determiners held within, "CardObs : Observations naturalistes issues de l'outil de saisie et gestion CardObs mis en place par le Service du Patrimoine Naturel (MNHN) / UMS PatriNat (OFB - CNRS - MNHN) - Données naturalistes de BARRIER Yannick". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/49c8dd63-bc43-411e-9da6-ee5a197ac2cd">https://bionomia.net/dataset/49c8dd63-bc43-411e-9da6-ee5a197ac2cd</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/49c8dd63-bc43-411e-9da6-ee5a197ac2cd">https://gbif.org/dataset/49c8dd63-bc43-411e-9da6-ee5a197ac2cd</a>. Formatted as a Frictionless Data package.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
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OpenNeuro
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