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367 results for “pass”
SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at San Marcos Pass USFS Stn (SanMarcosPass212)
Precipitation was collected by the Santa Barbara County Flood Control District at San Marcos Pass USFS Stn (SanMarcosPass212) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
SBC LTER: Land: Hydrology: Santa Barbara County Flood Control District - Precipitation at Refugio Pass (RefugioPass429)
Precipitation was collected by the Santa Barbara County Flood Control District at Refugio Pass (RefugioPass429) in the Santa Barbara coastal area. Data are reported hourly, and times reflect the end of the each 1-hour interval. For more information, see https://www.countyofsb.org/pwd/hydrology.sbc
Video S1. Two Ocean Pass South of Yellowstone National Park, Wyoming
<p><strong>Video S1.</strong> <strong>Two Ocean Pass South of Yellowstone National Park, Wyoming.</strong> Two Ocean Pass connects the headwaters of the Atlantic and Pacific drainages in the Bridger-Teton Wilderness of Wyoming south of Yellowstone National Park. Here, a broad alpine meadow straddles the Continental Divide at 2,478 m elevation, and headwaters of the Columbia and Missouri drainages originate from a single perennial stream; North Two Ocean Creek flows along the Continental Divide and branches into Pacific Creek, a Snake River tributary flowing to the west, and Atlantic Creek, a Yellowstone River tributary flowing to the east. The pass is a nearly level meadow near the center of which is a marsh that becomes a small lake in times of wet weather or snowmelt runoff. No barrier prevents the movement and mixing of fish between Pacific Creek and Atlantic Creek. Following glacial recession from the region about 14,000 years ago, ancestral Yellowstone cutthroat trout colonized the Yellowstone River drainage from sources in the lower Snake River drainage over Two Ocean Pass. They dispersed downstream and were the only trout inhabiting Yellowstone Lake for thousands of years prior to the establishment of Yellowstone National Park. The watershed of the Yellowstone River upstream of Yellowstone Lake, including Two Ocean Pass, is among the most remote in the contiguous United States and lies largely within protected federal wilderness. In July 2019, Yellowstone National Park and Wyoming Game and Fish Department biologists, with assistance from Wyoming Trout Unlimited and the Wyoming Storer Foundation, sampled environmental DNA in the connected waters near Two Ocean Pass. The sampling was conducted to determine if invasive lake trout or other nonnative fish were present, and could thereby colonize the Yellowstone River basin in the past or future and threaten native cutthroat trout of Yellowstone Lake.</p>
PASS Survey - Brasside Pond, Durham
<p>PASS Survey recorded on the south-side of Brasside Pond SSSI (Durham). Perimeter shading and macrophyte coverage given based on area of survey, as this is a large pond. </p>
PASS Survey - Liverpool (PParkPondLiverpool) Breakwave.
<p>Breakwave;</p> <p>10 minute hydrophone PASS Survey taken in Liverpool by Sound Artist; Breakwave. Recorded on 14th June 2021.</p>
Generalized Approximate Message Passing Practical 2D Phase Transition Simulations Dataset
<p>This deposition contains the results from a simulation of phase transitions for various practical 2D problem suites when using the Generalised Approximate Message Passing (GAMP) reconstruction algorithm.</p> <p>The deposition consists of:</p> <ol> <li>Five HDF5 databases containing the results from the phase transition simulations (<em>gamp_practical_2d_phase_transitions_ID_[0-4]_of_5.hdf5</em>).</li> <li>The Python script which was used to create the databases (<em>gamp_practical_2d_phase_transitions.py</em>).</li> <li>A Python module with tools needed to run the simulations (<em>gamp_pt_tools.py</em>).</li> <li>MD5 and SHA256 checksums of the databases and Python scripts (<em>gamp_practical_2d_phase_transitions.MD5SUMS / gamp_practical_2d_phase_transitions.SHA256SUMS</em>).</li> </ol> <p>The HDF5 databases are licensed under CC BY 4.0 (http://creativecommons.org/licenses/by/4.0/) . Since the CC BY 4.0 license is not well suited for source code, the Python scripts are licensed under the BSD 2-Clause license (http://opensource.org/licenses/BSD-2-Clause) .</p> <p><strong>The files are provided as-is with no warranty as detailed in the above mentioned licenses.</strong></p>
Generalized Approximate Message Passing Practical 2D Phase Transition Simulations Dataset 2
<p>This deposition contains the results from a simulation of phase transitions for various practical 2D and 3D problem suites when using the Generalised Approximate Message Passing (GAMP) reconstruction algorithm.</p> <p>The deposition consists of:</p> <ol> <li>Five HDF5 databases containing the results from the phase transition simulations (<em>gamp_practical_2d_phase_transitions_ID_[0-4]_of_5.hdf5</em>).</li> <li>The Python script which was used to create the databases (<em>gamp_practical_2d_phase_transitions.py</em>).</li> <li>A Python module with tools needed to run the simulations (<em>gamp_pt_tools.py</em>).</li> <li>MD5 and SHA256 checksums of the databases and Python scripts (<em>gamp_practical_2d_phase_transitions.MD5SUMS / gamp_practical_2d_phase_transitions.SHA256SUMS</em>).</li> </ol> <p>The HDF5 databases are licensed under CC BY 4.0 (http://creativecommons.org/licenses/by/4.0/) . Since the CC BY 4.0 license is not well suited for source code, the Python scripts are licensed under the BSD 2-Clause license (http://opensource.org/licenses/BSD-2-Clause) .</p> <p><strong>The files are provided as-is with no warranty as detailed in the above mentioned licenses.</strong></p>
Data and code associated with the manuscript: Three centuries of snowpack decline at an Alpine pass revealed by cosmogenic paleothermometry and luminescence photochronometry
<p>This dataset contains the data as well as the Matlab codes needed to reproduce the results in the following manuscript:</p> <p>Guralnik, B., Tremblay, M.M., Phillips, M., Sellwood, E.L., Gribenski, N., Presl, R., Haberkorn, A., Sohbati, R., Shuster, D.L., Valla, P., Jain, M., Schindler, K., Wallinga, J., and Hippe, K., Three centuries of snowpack decline at an Alpine pass revealed by cosmogenic paleothermometry and luminescence photochronometry. </p> <p>Briefly, this manuscript presents novel datasets of cosmogenic paleothermometery (quartz He-3) and luminescence photochronometery (feldspar IRSL), whose pairing constrains the temperature and insolation history of three bedrock outcrops at the Gotthard Pass in Switzerland over the last ~15,000 years. </p> <p>The data include (1) measured concentrations of cosmogenic Be-10, C-14, and He-3 in quartz, (2) stepwise degassing experiments on proton irradiated quartz grains that are used to determine sample-specific He-3 diffusion kinetics, (3) best-fit multiple diffusion domain (MDD) models to the proton-induced He-3 diffusion experiments, (5) Natural radioactivity and calculated feldspar infrared stimulated luminescence (ISRL) dose rates, (6) feldspar ISRL depth profiles, and (7) high-resolution microrelief surface scans and analysis.</p> <p>The code includes scripts necessary to reproduce the figures and results associated with this manuscript. The code is organized by figure into subfolders, and any data needed to reproduce a figure should be included in that folder. All original codes are distributed under the GNU General Public License. Codes written by others and utilized here are redistributed under their original license according to the terms and conditions therein, and are provided in the folder 'external.'</p> <p>Any questions about original Matlab codes published here should be directed to Benny Guralnik, benny.guralnik@gmail.com.</p>
Figures 42–46 in DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi
Figures 42–46: Chamberlainium occidentale tetrasporangial anatomy. (42) Vertical section through the outer thallus showing an early stage tetrasporangial conceptacle primordium with peripheral roof development (black arrowheads) and a protective layer of epithallial cells (e) (L 3986120). Scale bar = 50 μm. (43) Vertical section through the outer thallus showing a later stage tetrasporangial conceptacle primordium with peripheral roof development (black arrowheads) and tetrasporangial (t) initials arranged peripherally around a central columella (c). Note the persisting layer of protective epithallial cells (e) (UWC 93/220). Scale bar = 50 μm. (44) Vertical section through the outer thallus showing a maturing tetrasporangial conceptacle with peripheral roof development (black arrowheads) and tetrasporangial (t) initials, peripherally arranged around a central columella (c). Note the layer of protective epithallial cells (e) (UWC 93/220). Scale bar = 50 μm. (45) Vertical section through a mature, raised tetrasporangial conceptacle showing tetrasporangia (t) with stalk cells (white arrowheads), peripherally arranged around a well-defined central columella (C). Note, the sunken and unoccluded pore opening (white arrow) (UWC 93/220). Scale bar = 100 μm. (46) Magnified view of the pore canal of a mature tetrasporangial conceptacle showing terminal, elongate initials (black arrows) that project into the pore canal as papillae and the base of the pore canal sunken (black arrowheads) into the chamber with terminal, elongate initials near the base pointing downward. Note, the sunken and unoccluded pore opening (white arrow) (UWC 93/220). Scale bar = 20 μm.
Figures 36–41 in DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi
Figures 36–41: Chamberlainium occidentale gametangial anatomy. (36) Vertical section through the outer thallus showing a spermatangial conceptacle primordium with peripheral roof development (black arrows) and simple spermatangial systems (black arrowheads) confined to the conceptacle floor. Note the protective layer of epithallial cells (white arrow) (L 3986120). Scale bar = 50 μm. (37) Vertical section through a mature, raised spermatangial conceptacle showing the mucilage plug (white arrowhead) that occludes the pore opening and simple, spermatangial systems (black arrowheads) confined to the conceptacle floor (UWC 15/56). Scale bar = 50 μm. (38) Magnified view through a mature spermatangial conceptacle showing the pore canal lined with terminal, elongate initials (black arrowheads) that project into the pore canal as papillae (UWC 15/56). Scale bar = 20 μm. (39) Magnified view of a mature carpogonial conceptacle with carpogonial branches comprising a single support cell (s), a hypogynous cell (h) with sterile cell (black arrowhead), and a carpogonium (c) extended into a trichogyne (black arrows) that may project out of the pore. Note that the pore canal is lined with terminal, elongate initials (white arrows) that project into the pore canal as papillae (L 3986120). Scale bar = 20 μm. (40) Vertical section through a mature carposporangial conceptacle showing a discontinuous central fusion cell (black arrowhead) with peripherally arranged gonimoblast filaments each terminating in a carposporangium (C) (L 3986120). Scale bar = 50 μm. (41) Magnified view of the floor of a carposporangial conceptacle showing a discontinuous central fusion cell (black arrowheads) bearing a peripherally arranged gonimoblast filament (1–6) terminating in a carposporangium (C). The remains of unfertilised carpogonial branches (black arrow) persist across the dorsal surface of the central fusion cell (L 3986120). Scale bar = 20 μm.
Figures 26–30 in DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi
Figures 26–30: Chamberlainium glebosum tetrasporangial anatomy. (26) Vertical section through the outer thallus showing an early stage tetrasporangial conceptacle primordium with peripherally arranged tetrasporangial initials (black arrowheads) and a protective layer of epithallial cells (black arrow) (UWC 15/17). Scale bar = 50 μm. (27) Vertical section through the outer thallus showing a later stage tetrasporangial conceptacle primordium with peripheral roof development (black arrowheads) with a developing central columella (white arrowhead). Note the persisting layer of protective epithallial cells (black arrow) (UWC 15/17). Scale bar = 50 μm. (28) Vertical section through a maturing tetrasporangial conceptacle showing tetrasporangial initials (t) arranged peripherally around a central columella (between white arrowheads). Note the layer of protective epithallial cells (black arrow) being shed (L 3986123). Scale bar = 50 μm. (29) Vertical section through a mature, raised tetrasporangial conceptacle showing tetrasporangia (t) with stalk cells (white arrowheads), peripherally arranged around a well-defined central columella (C). Note the base of the pore canal sunken into the chamber with terminal, elongate initials near the base pointing downward (black arrowheads) (UWC 15/55). Scale bar = 100 μm. (30) Magnified view of the pore canal of a mature tetrasporangial conceptacle showing terminal, elongate initials (black arrows) that project into the pore canal as papillae and the base of the pore canal sunken (black arrowheads) into the chamber with terminal, elongate initials near the base pointing downward (UWC 15/55). Scale bar = 20 μm.
Figures 24–25 in DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi
Figures 24–25: Vertical section through the outer thallus showing spermatangial conceptacle primordium with peripheral roof development (black arrows) and simple spermatangial systems (black arrowheads) confined to the conceptacle floor. Note the protective layer of epithallial cells (white arrow). Scale bar = 50 μm. Vertical section through the outer thallus showing a mature, raised spermatangial conceptacle with the mucilage plug (white arrow) that occludes the pore opening and simple, spermatangial systems (white arrowheads) confined to the conceptacle floor. Note that the pore canal is lined with terminal, elongate initials (black arrowheads) that project into the pore canal as papillae. Scale bar = 50 μm.
Figure 1 in DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi
Figure 1: Map of South Africa (gray shade), with an inset of False Bay, showing the coastal provinces, the biogeographic marine provinces and the approximate locations of collecting sites (● = Chamberlainium capense, ■ = C. glebosum,: = C. occidentale).
Figures 7–11 in DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi
Figures 7–11: Chamberlainium capense habit and vegetative anatomy. (7) Rock fragment showing holotype specimen (white arrow) (L 3986119, tetrasporangial). Scale bar = 20 mm. (8) Encrusting to variably lumpy and slightly protuberant, epilithic thalli showing crusts abutting and easily discernible. Scale bar = 10 mm. (9) Vertical section through the margin (black arrow) showing the monomerous thallus construction with plumose medulla (M) giving rise to cortical filaments (C) that terminate in a single layer of epithallial cells (black arrowhead) (UWC 16/17). Scale bar = 50 μm. (10) Vertical section of the inner thallus showing cell fusions (f) between adjacent medullary filaments (UWC 16/17). Scale bar = 20 μm. (11) Vertical section of the outer thallus showing a single layer of epithallial cells (e) subtended by a layer of subepithallial initials (i). Note the paired, bottle-shaped trichocytes (t) (UWC 16/24). Scale bar = 20 μm.
Figures 4–6 in DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi
Figures 4–6: Habit photographs of Chamberlainium capense, C. glebosum and C. occidentale. (4) Chamberlainium capense is moderately thick to mostly lumpy and only slightly protuberant. Scale bar = 20 mm. (5) Chamberlainium glebosum is thick, very lumpy and highly protuberant. Scale bar = 20 mm. (6) Chamberlainium occidentale is morphologically highly variable, occurring as thin encrusting (smooth) to thick warty (mostly) to lumpy plants, and are only slightly protuberant. Scale bar = 30 mm.
Figures 15–18 in DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi
Figures 15–18: Chamberlainium capense tetrasporangial anatomy. (15) Vertical section through the outer thallus showing a later stage tetrasporangial conceptacle primordium with peripheral roof development (black arrowheads) and tetrasporangial initials (t) arranged peripherally around a central columella (c). Note the persisting layer of protective epithallial cells (black arrow) (L 3986119). Scale bar = 50 μm. (16) Vertical section through a mature, raised tetrasporangial conceptacle showing tetrasporangia (t) with a stalk cell (black arrowhead), peripherally arranged around a well-defined central columella (C). Note the remains of a corona (white arrow) that surrounds the pore opening (L 3986119). Scale bar = 50 μm. (17) Vertical section through a mature raised tetrasporangial conceptacle showing tetrasporangia (t) with stalk cells (black arrowheads), appearing to be arranged across the chamber floor as the columella (c) has disintegrated. Note the absence of the corona (white arrow) (UWC 16/09). Scale bar = 50 μm. (18) Magnified view of the pore canal of a mature tetrasporangial conceptacle showing the base of the pore canal sunken (black arrowheads) into the chamber with terminal, elongate initials near the base pointing downward (black arrows) and the remains of a corona (white arrow) that surrounds and occludes the pore opening. (L 3986119). Scale bar = 20 μm.
Figures 12–14 in DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi
Figures 12–14: Chamberlainium capense spermatangial anatomy (UWC 16/21). (12) Vertical section through the outer thallus showing a spermatangial conceptacle primordium with peripheral roof development (black arrows) and simple, spermatangial systems (black arrowheads) confined to the conceptacle floor. Note the protective layer of epithallial cells (white arrow). Scale bar = 50 μm. (13) Vertical section through a mature, raised spermatangial conceptacle showing the mucilage plug (white arrowhead) that occludes the pore opening and simple, spermatangial systems (black arrowheads) confined to the conceptacle floor. Scale bar = 50 μm. (14) Magnified view through a mature spermatangial conceptacle showing the mucilage plug (white arrowhead) that occludes the pore opening and simple, spermatangial systems (black arrowheads) confined to the conceptacle floor. Note that the pore canal is lined with terminal, elongate initials (black arrows) that project into the pore canal as papillae. Scale bar = 20 μm.
Figure 3 in DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi
Figure 3: Bayesian inference tree based on rbcL sequences. Species with sequenced type/'topotype' material are highlighted in bold. Generitype species within Corallinales are identified by a star (+). Species names are followed by their GenBank accession number and their geographic location, including ocean basin where needed. Numbers in brackets, following the GenBank accession numbers, are the total number of identical sequences. Bootstrap support (BS) and Bayesian posterior probability (BPP) values are provided at branch nodes. BS and BPP values = 100 % and = 1 respectively, are denoted by an asterisk (*); BS and BPP values <75 % and <0.75 respectively. Atl = Atlantic Ocean, Ind = Indian Ocean, Med = Mediterranean, Pac = Pacific Ocean.
Figure 2 in DNA sequencing reveals three new species of Chamberlainium (Corallinales, Rhodophyta) from South Africa, all formerly passing under Spongites yendoi
Figure 2: Maximum likelihood tree based on psbA sequences. Species with sequenced type/'topotype' material are highlighted in bold. Generitype species and molecular references for generitype species within the Corallinales are identified by a star (+). Species names are followed by their GenBank accession number and their geographic location, including ocean basin where needed. Numbers in brackets, following the GenBank accession numbers, are the total number of identical sequences. Bootstrap support (BS) and Bayesian posterior probability (BPP) values are provided at branch nodes. BS and BPP values = 100% and = 1 respectively, are denoted by an asterisk (*); BS and BPP values <75 % and <0.75 respectively, are not shown. Atl = Atlantic Ocean, Ind = Indian Ocean, Med = Mediterranean, Nam = Namibia, NZ = New Zealand, Pac = Pacific Ocean.
GNN Models and results for the paper "Band-gap regression with architecture-optimized message-passing neural networks"
<p>Contains files with model parameters for random search and reference models, as well as the converted AFLOW dataset, in graphs form. Corresponds to results in <a href="https://arxiv.org/pdf/2309.06348.pdf">https://arxiv.org/pdf/2309.06348.pdf</a>.</p> <p>Model predictions along with AUID identifiers are located in result_combined.zip, band gap (egap) and formation energy (ef) predictions are from the PaiNN ensemble, band gap classification is done by MPEU model.</p> <p>New results include PaiNN NAS models.</p> <p>Compatible source code can be found at <a href="https://github.com/tisabe/jraph_MPEU/tree/v1.0.0">jraph_MPEU GitHub repository</a>.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.