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EOL Fossil Fishes Patch: EOL Fossil Fishes Patch
<p>Taxonomy of fossil fishes compiled from multiple sources:</p> <p>Bardack, D. & Richardson, E. S., Jr. 1977. New agnathous fishes from the Pennsylvanian of Illinois. Fieldiana, Geology 33(26):489-510. <a href="http://doi.org/10.5962/bhl.title.5167">http://doi.org/10.5962/bhl.title.5167</a></p> <p>Bardack, D. and Zangerl, R., 1968. First fossil lamprey: a record from the Pennsylvanian of Illinois. Science, 162(3859), pp.1265-1267. <a href="http://doi.org/10.1126/science.162.3859.1265">http://doi.org/10.1126/science.162.3859.1265</a></p> <p>Denison, R.H., 1967. Ordovician vertebrates from western United States. Fieldiana, Geology 16(6):131-192. <a href="http://doi.org/10.5962/bhl.title.5321">http://doi.org/10.5962/bhl.title.5321</a></p> <p>Denison, R.H., 1970. Revised classification of Pteraspididae with description of new forms from Wyoming. Fieldiana, Geology 20(1):1-41. <a href="https://doi.org/10.5962/bhl.title.3330">https://doi.org/10.5962/bhl.title.3330</a></p> <p>Dineley, D.L., 1964. New specimens of Traquairaspis from Canada. Palaeontology 7:210–219. Dineley, D. L. and Loeffler, E. J. 1976. Osctracoderm faunas of the Delorme and associated Siluro-Devonian formations, North West Territories, Canada. Spec. Pap. Paleont. 18:1-214. Dzik, J. and Moskalenko, T.A., 2016. Problematic scale-like fossils from the Ordovician of Siberia with possible affinities to vertebrates. Neues Jahrbuch für Geologie und Paläontologie-Abhandlungen, pp.251-260. <a href="http://doi.org/10.1127/njgpa/2016/0553">http://doi.org/10.1127/njgpa/2016/0553</a> </p> <p>Janvier, P. and Lund, R., 1983. Hardistiella montanensis n. gen. et sp.(Petromyzontida) from the Lower Carboniferous of Montana, with remarks on the affinities of the lampreys. Journal of vertebrate Paleontology, 2(4), pp.407-413. <a href="http://doi.org/10.1080/02724634.1983.10011943">http://doi.org/10.1080/02724634.1983.10011943</a> </p> <p>Märss, T., 2019. Silurian cyathaspidid heterostracans of Northern Eurasia. Estonian Journal of Earth Sciences, 68(3), pp.113-146. <a href="https://doi.org/10.3176/earth.2019.11">https://doi.org/10.3176/earth.2019.11</a> </p> <p>Märss, T. and Karatajūte-Talimaa, V., 2009. Late Silurian-Early Devonian tessellated heterostraean Oniscolepis Pander, 1856 from the East Baltic and North Timan. Estonian Journal of Earth Sciences, 58(1). <a href="http://doi.org/10.3176/EARTH.2009.1.05">http://doi.org/10.3176/EARTH.2009.1.05</a> </p> <p>Paleobiology Database, PBDB, accessed at h<a>ttps://paleobiodb.org</a> </p> <p>Shu, D.G., Luo, H.L., Conway Morris, S., Zhang, X.L., Hu, S.X., Chen, L., Han, J.I.A.N., Zhu, M., Li, Y. and Chen, L.Z., 1999. Lower Cambrian vertebrates from south China. Nature, 402(6757), pp.42-46. <a href="http://doi.org/10.1038/46965">http://doi.org/10.1038/46965</a> </p> <p>Tarlo, L. B. H. 1964. Psammosteiformes (Agnatha). 1 General part. Palaeontologia Polonica 13:1-135. Tarrant, P.R., 1991. The ostracoderm Phialaspis from the Lower Devonian of the Welsh Borderland and South Wales. Palaeontology 34:399–438. Van der Laan, R., 2018. Family-group names of fossil fishes. European Journal of Taxonomy, (466). <a href="http://doi.org/10.5852/ejt.2018.466">http://doi.org/10.5852/ejt.2018.466</a> </p> <p>WoRMS Editorial Board (2020). World Register of Marine Species. Available from <a href="http://www.marinespecies.org">http://www.marinespecies.org</a> at VLIZ. <a href="https://doi.org/10.14284/170">https://doi.org/10.14284/170</a> </p> <p>Zarling, A., 2017. Phenotypic trajectories during the evolution of hybrid lineages: the case of Oophaga histrionica and Oophaga lehmanni. Thesis, Universidad de los Andes, Colombia. <a href="http://doi.org/10.1038/nature0473">http://doi.org/10.1038/nature0473</a></p>
EOL Microbes Patch (MIP) - active: EOL Microbes Patch 2023
<p>Bacteria, viruses & microbial Eukaryotes to complement NCBI & WoRMS coverage. Hierarchy follows NCBI & Adl et al. 2019.</p> <h3>References </h3> <p>Adam, Rodney D. 2017. Diplomonadida. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–28. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_1-1">https://doi.org/10.1007/978-3-319-32669-6_1-1</a></p> <p>Adl, S. M., et al. 2019. Revisions to the classification, nomenclature, and diversity of eukaryotes. Journal of Eukaryotic Microbiology 66, 4–119. <a href="https://doi.org/10.1111/jeu.12691">https://doi.org/10.1111/jeu.12691 </a></p> <p>Azevedo, Carlos, and P. M. Hine. 2017. Haplosporidia. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–29. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_16-1">https://doi.org/10.1007/978-3-319-32669-6_16-1</a></p> <p>Baldauf, Sandra L., and Joan E. Strassmann. 2017. Dictyostelia. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–45. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_14-1">https://doi.org/10.1007/978-3-319-32669-6_14-1</a></p> <p>Beakes, Gordon W., and Marco Thines. Hyphochytriomycota and Oomycota. 2016. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–71. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_26-1">https://doi.org/10.1007/978-3-319-32669-6_26-1</a></p> <p>Bennett, R. M., D. Honda, G. W. Beakes, and M. Thines. 2017. Labyrinthulomycota. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–36. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_25-1">https://doi.org/10.1007/978-3-319-32669-6_25-1</a></p> <p>Boltovskoy, D., ed., 1999. South Atlantic zooplankton. Backhuys Publishers, Leiden. Boltovskoy, Demetrio, O. Roger Anderson, and Nancy M. Correa. 2017. Radiolaria and Phaeodaria. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–33. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_19-2">https://doi.org/10.1007/978-3-319-32669-6_19-2</a></p> <p>Brown, Matthew W., Jeffrey D. Silberman, and Frederick W. Spiegel. 2010. A Contemporary Evaluation of the Acrasids (Acrasidae, Heterolobosea, Excavata). European Journal of Protistology 48(2):103–23. <a href="https://doi.org/10.1016/j.ejop.2011.10.001">https://doi.org/10.1016/j.ejop.2011.10.001 </a></p> <p>Bulman, Simon, and Sigrid Neuhauser. 2017. Phytomyxea. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–21. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_24-1">https://doi.org/10.1007/978-3-319-32669-6_24-1</a></p> <p>Burki, F., 2014. The Eukaryotic Tree of Life from a Global Phylogenomic Perspective. Cold Spring Harb Perspect Biol 6, a016147. <a href="https://doi.org/10.1101/cshperspect.a016147">https://doi.org/10.1101/cshperspect.a016147 </a></p> <p>Burki Fabien, Kaplan Maia, Tikhonenkov Denis V., Zlatogursky Vasily, Minh Bui Quang, Radaykina Liudmila V., Smirnov Alexey, Mylnikov Alexander P., Keeling Patrick J., 2016. Untangling the early diversification of eukaryotes: a phylogenomic study of the evolutionary origins of Centrohelida, Haptophyta and Cryptista. Proceedings of the Royal Society B: Biological Sciences 283, 20152802. <a href="https://doi.org/10.1098/rspb.2015.2802">https://doi.org/10.1098/rspb.2015.2802 </a></p> <p>Burreson, Eugene M., and Susan E. Ford. 2004. A Review of Recent Information on the Haplosporidia, with Special Reference to Haplosporidium Nelsoni (MSX Disease). Aquatic Living Resources 17(4):499–517. <a href="https://doi.org/10.1051/alr:2004056">https://doi.org/10.1051/alr:2004056</a></p> <p>Cali, Ann, James J. Becnel, and Peter M. Takvorian. 2017. Microsporidia. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–60. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_27-1">https://doi.org/10.1007/978-3-319-32669-6_27-1</a></p> <p>Caragnano, A., Foetisch, A., Maneveldt, G.W., Millet, L., Liu, L.-C., Lin, S.-M., Rodondi, G., Payri, C.E., 2018. Revision of Corallinaceae (Corallinales, Rhodophyta): recognizing Dawsoniolithon gen. nov., Parvicellularium gen. nov. and Chamberlainoideae subfam. nov. containing Chamberlainium gen. nov. and Pneophyllum. Journal of Phycology 54, 391–409. <a href="https://doi.org/10.1111/jpy.12644">https://doi.org/10.1111/jpy.12644 </a></p> <p>Cavalier-Smith, T., 2016. Higher classification and phylogeny of Euglenozoa. European Journal of Protistology 56, 250–276. <a href="https://doi.org/10.1016/j.ejop.2016.09.003">https://doi.org/10.1016/j.ejop.2016.09.003 </a></p> <p>Cavalier-Smith, T., Chao, E.E., 2010. Phylogeny and Evolution of Apusomonadida (Protozoa: Apusozoa): New Genera and Species. Protist 161, 549–576. <a href="https://doi.org/10.1016/j.protis.2010.04.002">https://doi.org/10.1016/j.protis.2010.04.002 </a></p> <p>Cavalier-Smith, T., Chao, E.E., Lewis, R., 2018. Multigene phylogeny and cell evolution of chromist infrakingdom Rhizaria: contrasting cell organisation of sister phyla Cercozoa and Retaria. Protoplasma 255, 1517–1574. <a href="https://doi.org/10.1007/s00709-018-1241-1">https://doi.org/10.1007/s00709-018-1241-1 </a></p> <p>Cavalier-Smith, T., Chao, E.E.-Y., 2006. Phylogeny and megasystematics of phagotrophic heterokonts (kingdom Chromista). J. Mol. Evol. 62, 388–420. <a href="https://doi.org/10.1007/s00239-004-0353-8">https://doi.org/10.1007/s00239-004-0353-8 </a></p> <p>Čepička, Ivan, Michael F. Dolan, and Gillian H. Gile. 2016. Parabasalia. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–44. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_9-1">https://doi.org/10.1007/978-3-319-32669-6_9-1</a></p> <p>Cook, Martha E., and Linda E. Graham. 2016. Chlorokybophyceae, Klebsormidiophyceae, Coleochaetophyceae. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–20. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_36-1">https://doi.org/10.1007/978-3-319-32669-6_36-1</a></p> <p>Díaz-Tapia, P., Pasella, M.M., Verbruggen, H., Maggs, C.A., 2019. Morphological evolution and classification of the red algal order Ceramiales inferred using plastid phylogenomics. Molecular Phylogenetics and Evolution 137, 76–85. <a href="https://doi.org/10.1016/j.ympev.2019.04.022">https://doi.org/10.1016/j.ympev.2019.04.022 </a></p> <p>Eikrem, Wenche, Linda K Medlin, Jorijntje Henderiks, Sebastian Rokitta, Björn Rost, Ian Probert, Jahn Throndsen, and Bente Edvardsen. 2017. Haptophyta. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–61. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_38-2">https://doi.org/10.1007/978-3-319-32669-6_38-2</a></p> <p>Eliáš, Marek, Raquel Amaral, Karen P. Fawley, Marvin W. Fawley, Yvonne Němcová, Jiří Neustupa, Pavel Přibyl, Lilia M. A. Santos, and Tereza Ševčíková. 2017. Eustigmatophyceae. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–39. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_39-1">https://doi.org/10.1007/978-3-319-32669-6_39-1</a></p> <p>Fang, Ling, Frederik Leliaert, Phil M. Novis, Zhenhua Zhang, Huan Zhu, Guoxiang Liu, David Penny, and Bojian Zhong. 2018. Improving Phylogenetic Inference of Core Chlorophyta Using Chloroplast Sequences with Strong Phylogenetic Signals and Heterogeneous Models. Molecular Phylogenetics and Evolution 127:248–55.<br> <a href="https://doi.org/10.1016/j.ympev.2018.06.006">https://doi.org/10.1016/j.ympev.2018.06.006</a></p> <p>Fang, Ling, Frederik Leliaert, Zhen-Hua Zhang, David Penny, and Bo-Jian Zhong. 2017. Evolution of the Chlorophyta: Insights from Chloroplast Phylogenomic Analyses. Journal of Systematics and Evolution 55(4):322–32. <a href="https://doi.org/10.1111/jse.12248">https://doi.org/10.1111/jse.12248</a></p> <p>Frank W. 1984. Non-Hemoparasitic Protozoans. In: Hoff G.L., Frye F.L., Jacobson E.R. (eds) Diseases of Amphibians and Reptiles. Springer, Boston, MA.<br> <a href="https://doi.org/10.1007/978-1-4615-9391-1_19">https://doi.org/10.1007/978-1-4615-9391-1_19 </a></p> <p>Fučíková, Karolina, Paul O Lewis, Suman Neupane, Kenneth G. Karol, and Louise A. Lewis. 2019. Order, Please! Uncertainty in the Ordinal-Level Classification of Chlorophyceae. PeerJ 7 e6899. <a href="https://doi.org/10.7717/peerj.6899">https://doi.org/10.7717/peerj.6899</a></p> <p>Gao, F., Warren, A., Zhang, Q., Gong, J., Miao, M., Sun, P., Xu, D., Huang, J., Yi, Z., Song, W., 2016. The All-Data-Based Evolutionary Hypothesis of Ciliated Protists with a Revised Classification of the Phylum Ciliophora (Eukaryota, Alveolata). Scientific Reports 6, 24874. <a href="https://doi.org/10.1038/srep24874">https://doi.org/10.1038/srep24874</a></p> <p>Gast, Rebecca J. 2017. Centrohelida and Other Heliozoan-Like Protists. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–17. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_28-1">https://doi.org/10.1007/978-3-319-32669-6_28-1</a></p> <p>Gibson, Wendy. 2016. Kinetoplastea. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–50. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_7-1">https://doi.org/10.1007/978-3-319-32669-6_7-1</a></p> <p>Gkelis, Spyros, Iordanis Ourailidis, Manthos Panou, and Nikos Pappas. 2016. Cyanobacteria of Greece: An Annotated Checklist. Biodiversity Data Journal 4: e10084. <a href="https://doi.org/10.3897/BDJ.4.e10084">https://doi.org/10.3897/BDJ.4.e10084</a></p> <p>Gomaa, F., Lahr, D.J.G., Todorov, M., Li, J., Lara, E., 2017. A contribution to the phylogeny of agglutinating Arcellinida (Amoebozoa) based on SSU rRNA gene sequences. Eur. J. Protistol. 59, 99–107. <a href="https://doi.org/10.1016/j.ejop.2017.03.005">https://doi.org/10.1016/j.ejop.2017.03.005 </a></p> <p>Gomez, F 2012. A checklist and classification of living dinoflagellates (Dinoflagellata, Alveolata). CICIMAR Oceanides 27:65–140. Gontcharov, A.A., 2008. Phylogeny and classification of Zygnematophyceae (Streptophyta): current state of affairs. Fottea 8, 87–104. <a href="https://doi.org/10.5507/fot.2008.004">https://doi.org/10.5507/fot.2008.004 </a></p> <p>Groves, John R., Demír Altiner, and Roberto Rettori. 2003. Origin and Early Evolutionary Radiation of the Order Lagenida (Foraminifera). Journal of Paleontology 77(5): 831–43.</p> <p>Guiry, M.D. & Guiry, G.M. 2020. AlgaeBase. World-wide electronic publication, National University of Ireland, Galway. <a href="https://www.algaebase.org">https://www.algaebase.org </a></p> <p>Hall, John D., and Richard McCourt. 2017. Zygnematophyta. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–29. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_41-2">https://doi.org/10.1007/978-3-319-32669-6_41-2</a></p> <p>Hampl, Vladimir. 2016. Preaxostyla. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–36. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_8-1">https://doi.org/10.1007/978-3-319-32669-6_8-1</a></p> <p>Hauer, T. & Komárek, J. 2020: CyanoDB 2.0 - On-line database of cyanobacterial genera. - World-wide electronic publication, Univ. of South Bohemia & Inst. of Botany AS CR, <a href="http://www.cyanodb.cz">http://www.cyanodb.cz</a></p> <p>Heiss, Aaron A., Matthew W. Brown, and Alastair G. B. Simpson. 2016. Apusomonadida. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–27. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_15-1">https://doi.org/10.1007/978-3-319-32669-6_15-1</a></p> <p>Hoef-Emden, Kerstin, and John M. Archibald. 2016. Cryptophyta (Cryptomonads). In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–41. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_35-1">https://doi.org/10.1007/978-3-319-32669-6_35-1</a></p> <p>Horiguchi, Takeo. 2016. Raphidophyceae (Raphidophyta). In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–26. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_37-1">https://doi.org/10.1007/978-3-319-32669-6_37-1</a></p> <p>Jeon, Boo Seong, Seung Won Nam, Sunju Kim, Myung Gil Park, Boo Seong Jeon, Seung Won Nam, Sunju Kim, and Myung Gil Park. 2018. Revisiting the Parvilucifera Infectans / P. Sinerae (Alveolata, Perkinsozoa) Species Complex, Two Parasitoids of Dinoflagellates. Algae 33(1):1–19. <a href="https://doi.org/10.4490/algae.2018.33.3.6">https://doi.org/10.4490/algae.2018.33.3.6</a></p> <p>Karpov, S.A., López-García, P., Mamkaeva, M.A., Klimov, V.I., Vishnyakov, A.E., Tcvetkova, V.S., Moreira, D., 2018. The Chytrid-like Parasites of Algae Amoeboradix gromovi gen. et sp. nov. and Sanchytrium tribonematis Belong to a New Fungal Lineage. Protist 169, 122–140. <a href="https://doi.org/10.1016/j.protis.2017.11.002">https://doi.org/10.1016/j.protis.2017.11.002 </a></p> <p>Karpov, S.A., Vishnyakov, A.E., Moreira, D., López‐García, P., 2019. The Ultrastructure of Sanchytrium tribonematis (Sanchytriaceae, Fungi incertae sedis) Confirms its Close Relationship to Amoeboradix. Journal of Eukaryotic Microbiology 66, 892–898. <a href="https://doi.org/10.1111/jeu.12740">https://doi.org/10.1111/jeu.12740 </a></p> <p>Kawai, Hiroshi, and Eric C. Henry. 2016. Phaeophyta. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–38. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_31-1">https://doi.org/10.1007/978-3-319-32669-6_31-1</a></p> <p>Keeling, Patrick J. 2016. Chlorarachniophytes. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–17. Cham: Springer International Publishing. <a href="https://doi.org/10.1007/978-3-319-32669-6_34-1">https://doi.org/10.1007/978-3-319-32669-6_34-1</a></p> <p>Komárek, J., Kaštovský, J., Mareš, J., & Johansen, J. R. 2014. Taxonomic classification of cyanoprokaryotes (cyanobacterial genera) 2014, using a polyphasic approach. Preslia, 86(4):295-335.</p> <p>Kosakyan, A., Gomaa, F., Lara, E., Lahr, D.J.G., 2016. Current and future perspectives on the systematics, taxonomy and nomenclature of testate amoebae. European Journal of Protistology, Special issue on Testate Amoebae – a tribute to Ralf Meisterfeld 55, 105–117. <a href="https://doi.org/10.1016/j.ejop.2016.02.001">https://doi.org/10.1016/j.ejop.2016.02.001 </a></p> <p>Kostka, Martin. 2016. Opalinata. In Handbook of the Protists, edited by John M. Archibald, Alastair G.B. Simpson, Claudio H. Slamovits, Lynn Margulis, Michael Melkonian, David J. Chapman, and John O. Corliss, 1–23. 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EOL Mammals Patch (MAM)
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Quaternary International. <a href="https://doi.org/10.1016/j.quaint.2018.06.006">https://doi.org/10.1016/j.quaint.2018.06.006</a></p> <p>Villmoare, B., 2018. Early Homo and the role of the genus in paleoanthropology. American Journal of Physical Anthropology 165, 72–89. <a href="https://doi.org/10.1002/ajpa.23387">https://doi.org/10.1002/ajpa.23387</a></p> <p>Voss, Robert S; Gutiérrez, Eliécer E; Solari, Sergio; Rossi, Rogerio V; Jansa, Sharon A. 2014. Phylogenetic relationships of mouse opossums (Didelphidae, Marmosa) with a revised subgeneric classification and notes on sympatric diversity. American Museum Novitates. 3817: 1–27. <a href="https://doi.org/10.1206/3817.1">https://doi.org/10.1206/3817.1 </a></p> <p>Voss, R.S., Hubbard, C., Jansa, S.A., 2013. Phylogenetic Relationships of New World Porcupines (Rodentia, Erethizontidae): Implications for Taxonomy, Morphological Evolution, and Biogeography. novi 2013, 1–36. <a href="https://doi.org/10.1206/3769.2">https://doi.org/10.1206/3769.2</a></p> <p>Voss, R. S.; Jansa, S. A. 2009. Phylogenetic relationships and classification of didelphid marsupials, an extant radiation of New World metatherian mammals. Bulletin of the American Museum of Natural History 322:1–177. <a href="https://doi.org/10.1206/322.1">https://doi.org/10.1206/322.1 </a></p> <p>Werdelin, L. 2011. "A new genus and species of Felidae (Mammalia) from Rusinga Island, Kenya, with notes on early Felidae of Africa". Estudios Geológicos. 67(2):217–222.</p> <p>Werdelin, L., Lewis, M.E., 2001. A revision of the genus Dinofelis (Mammalia, Felidae). Zool J Linn Soc 132, 147–258. <a href="https://doi.org/10.1111/j.1096-3642.2001.tb02465.x">https://doi.org/10.1111/j.1096-3642.2001.tb02465.x</a></p> <p>Wilson, D.E., Reeder, D.M., 2011. Class Mammalia Linnaeus, 1758. In: Zhang, Z.-Q. (Ed.) Animal biodiversity: An outline of higher-level classification and survey of taxonomic richness. Zootaxa 3148, 56. <a href="https://doi.org/10.11646/zootaxa.3148.1.9">https://doi.org/10.11646/zootaxa.3148.1.9</a></p>
EOL Tenebrionidae Patch (TEN): EOL Tenebrionidae Patch
<p>Taxonomic hierarchy & species lists for Tenebrionidae compiled from multiple sources:</p> <p>Aloquio, S., Grossi, P.C., Lopes-Andrade, C., 2019. Esemephe peba sp. nov., the first Brazilian Esemephina (Coleoptera: Tenebrionidae: Cossyphodini). Zootaxa 4648, 178–186. <a href="https://doi.org/10.11646/zootaxa.4648.1.10">https://doi.org/10.11646/zootaxa.4648.1.10 </a></p> <p>Ando, K., Itioka, T. & Kishimoto-Yamada, K., 2017. Record of phototactic Tenebrionidae (Coleoptera) from Lambir Hills, Borneo, with description of a new genus and twelve new species. Contributions from the Biological Laboratory Kyoto University, 30(3), pp.127-171. Atlas of Living Australia. Available from <a href="http://www.ala.org.au">http://www.ala.org.au</a> </p> <p>Bouchard P, Bousquet Y, Davies A, Alonso-Zarazaga M, Lawrence J, Lyal C, Newton A, Reid C, Schmitt M, Slipinski A, Smith A. 2011. Family-Group Names In Coleoptera (Insecta). ZooKeys 88: 1-972. <a href="https://doi.org/10.3897/zookeys.88.807">https://doi.org/10.3897/zookeys.88.807 </a></p> <p>Bousquet Y. & Bouchard P. 2014. Review of the species of Paratenetus Spinola inhabiting America, north of Mexico (Coleoptera, Tenebrionidae). ZooKeys 415:23-51. <a href="https://doi.org/10.3897/zookeys.415.6524">https://doi.org/10.3897/zookeys.415.6524</a> </p> <p>Bousquet Y, Thomas DB, Bouchard P, Smith AD, Aalbu RL, Johnston AM, Steiner WE Jr. 2018. Catalogue of Tenebrionidae (Coleoptera) of North America. ZooKeys 728: 1-455. <a href="https://doi.org/10.3897/zookeys.728.20602">https://doi.org/10.3897/zookeys.728.20602</a> </p> <p>Bremer, H., Lillig, M., 2014. World Catalogue of Amarygmini, Rhysopaussini and Falsocossyphini (Coleoptera; Tenebrionidae). Mitteilungen der Münchner Entomologischen Gesellschaft 104 Supplementum, 3–176.</p> <p>Bremer, H.J. & Lillig, M. 2017. Remarks on the Genera of Hypophlaeini and the Subgenera of Corticeus Piller & Mitterpracher, 1783, with descriptions of new species of Corticeus of the Oriental Region (Coleoptera: Tenebrionidae, Hypophlaeini). Entomologische Zeitschrift 127(2):67-75.</p> <p>Bremer, H.J. 1998. Revision der orientalischen Corticeus-Arten (Col., Tenebrionidae, Hypophloeini). I. Teil. Acta Coleopterologica 14: 3-32.</p> <p>Endrödy-Younga, S., 1996. Revision of the tribe Caenocrypticini (Coleoptera: Tenebrionidae:Tentyriinae), Transvaal Museum monograph. Transvaal Museum, Pretoria.</p> <p>Ferrer, J., and G. Moragues. 2000. Contribution à l´étude des Cnemeplatiini. Description d´une nouvelle Rondoniella Kaszab (1970) du Laos. (Coleoptera, Tenebrionidae). Nouvelle Revue d__Entomologie 17:99-105.</p> <p>Flores, G.E. & Chani-Posse, M. 2005. Patagonopraocis, a new genus of Praocini from Patagonia (Coleoptera: Tenebrionidae). Annales zoologici (Warsaw) 55: 575–581.</p> <p>Flores, G.E. 2000. Systematics of the Andean Genera Falsopraocis Kulzer and Antofagapraocis New Genus (Coleoptera: Tenebrionidae), with Descriptions of Two New Species. Journal of the New York Entomological Society 108, 52–75.</p> <p>Flores, G.E. 2001. Taxonomic Placement of the Andean Genera Praocidia Fairmaire and Pilobaloderes Kulzer (Coleoptera: Tenebrionidae: Praocini). Journal of the New York Entomological Society 109:171–178.</p> <p>Flores, G.E., Giraldo, A.E., 2020. Taxonomic status of Parapraocis, a new genus of Praociini (Coleoptera: Tenebrionidae: Pimeliinae) from Peru. Rev. Soc. Entomol. Arg. 79, 34–40. <a href="https://doi.org/10.25085/rsea.790305">https://doi.org/10.25085/rsea.790305</a> </p> <p>Flores, G.E., Vidal, P., 2009. Systematic position and cladistic analysis of Gyrasida Koch, a remarkable genus of Praocini (Coleoptera: Tenebrionidae) from Chile. Zootaxa 1978, 48–62. <a href="https://doi.org/10.11646/zootaxa.1978.1.2">https://doi.org/10.11646/zootaxa.1978.1.2</a> </p> <p>Grimm, R., 2015. New and little known species of Tenebrionidae (Coleoptera) from Borneo (5). Stuttgarter Beitrage zur Naturkunde A, Neue Serie 8:215–225.</p> <p>Grimm, R., Schawaller, W., 2019. Checklist for the Darkling Beetles of Borneo (Coleoptera: Tenebrionidae s.str.). sbna.2 2, 61–82. <a href="https://doi.org/10.18476/insy.v02.a5">https://doi.org/10.18476/insy.v02.a5</a> </p> <p>Iwan, D., Kamiński, M.J. Toward a natural classification of opatrine darkling beetles: comparative study of female terminalia. Zoomorphology 135, 453–485 (2016). <a href="https://doi.org/10.1007/s00435-016-0328-5">https://doi.org/10.1007/s00435-016-0328-5</a> </p> <p>Iwan, D., Löbl, I. (Eds.), 2020. Tenebrionoidea, Revised and Updated Second Edition. Catalog of Palaearctic Coleoptera. Brill.</p> <p>Kamiński MJ, Kanda K, Lumen R, Ulmer JM, Wirth CC, Bouchard P, Aalbu R, Mal N, Smith AD. 2019. A catalogue of the tribe Sepidiini Eschscholtz, 1829 (Tenebrionidae, Pimeliinae) of the world. ZooKeys 844: 1-121. <a href="https://doi.org/10.3897/zookeys.844.34241">https://doi.org/10.3897/zookeys.844.34241</a> </p> <p>Kamiński, M.J., 2016. Catalogue and Distribution of the Subtribe Eurynotina (Coleoptera: Tenebrionidae: Pedinini). annz 66, 227–266. <a href="https://doi.org/10.3161/00034541ANZ2016.66.2.006">https://doi.org/10.3161/00034541ANZ2016.66.2.006</a> </p> <p>Kamiński, M.J., Kanda, K., Raś, M. & Smith, A.D. 2018. Pythiopina, an enigmatic subtribe of darkling beetles (Coleoptera: Tenebrionidae: Pedinini): taxonomic revision, microtomography, ecological niche models and phylogenetic position. Syst Entomol. 43:147-165. <a href="https://doi.org/10.1111/syen.12255">https://doi.org/10.1111/syen.12255</a> </p> <p>Kamiński, M.J., Schoeman, C.S., 2018. Taxonomic revision of a darkling beetles genus Anaxius (Tenebrionidae: Pedinini: Helopinina). Zootaxa 4455, 471. <a href="https://doi.org/10.11646/zootaxa.4455.3.4">https://doi.org/10.11646/zootaxa.4455.3.4</a> </p> <p>Kulzer, H. 1954. Achter Beitrag zur Kenntnis der Tenebrioniden (Col.). Sammelergebnis der Indien-Reise von Herrn Konsul G. Frey und neue Tenebrioniden aus dem orientalischen und australischen Faunengebiet. Entomologische Arbeiten aus dem Museum G. Frey Tutzing bei München 5:20-73.</p> <p>Kulzer, H., 1954. Neunter Beitrag zur Kenntnis der Tenebrioniden (Col.). Eine Studie über die Tribus Nycteliini. Ent. Arb. Mus. Georg Frey 5, 145–267.</p> <p>Lea, A. M. 1919. Notes on Some Miscellaneous Coleoptera, with Descriptions of New Species, Part v. Transactions and proceedings of the Royal Society of South Australia 43:166-261.</p> <p>Kulzer, H. 1958. Monographie der südamerikanischen Tribus Praocini (Col.) (16 Beitrag zur Kenntnis der Tenebrioniden). Entomologische Arbeiten aus dem Museum George Frey, 9:1–105.</p> <p>Lawrence, J.F. & Ślipinśki, A., 2010. 11.13. Trachelostenidae Lacordaire, 1859, in: Kükenthal, W., Leschen, R.A.B., Beutel, R.G., Lawrence, J.F. (Eds.), Coleoptera, Beetles, Volume 2, Morphology and Systematics (Elateroidea, Bostrichiformia, Cucujiformia Partim). DE GRUYTER, Berlin, New York. <a href="https://doi.org/10.1515/9783110911213.571">https://doi.org/10.1515/9783110911213.571</a> </p> <p>Liu S. & Ren G. 2016. Two new species and one newly recorded species of Uloma Dejean, 1821 from Zhejiang, China (Coleoptera, Tenebrionidae, Ulomini). ZooKeys 607:103-118. <a href="https://doi.org/10.3897/zookeys.607.7836">https://doi.org/10.3897/zookeys.607.7836</a> </p> <p>Matthews E.G. & Lawrence J.F. 2015, Trachelostenini sensu novo: redescriptions of Trachelostenus Solier, Myrmecodema Gebien and Leaus Matthews & Lawrence, based on adults and larvae, and descriptions of three new species of Leaus (Coleoptera: Tenebrionidae). Zootaxa 4020(2):289-312. <a href="https://10.11646/zootaxa.4020.2.4">https://10.11646/zootaxa.4020.2.4</a> </p> <p>Peña, L.E., 1974. Nuevas especies de Coleoptera del género Myrmecodema (Tenebrionidae). Revista Chilena de Entomología, 8, pp.17-21.</p> <p>Peña, L.E., 1980. Aporte al conocimiento de los tenebrionidos de America del Sur (Coleóptera: Tenebrionidae). Revista Chilena de Entomologia 10, 37–59.</p> <p>Penrith, M.-L., Endrödy-Younga, S., 1994. Revision of the subtribe Cryptochilina (Coleoptera: Tenebrionidae: Cryptochilini). Transvaal Museum monograph No. 9. Transvaal Museum, Pretoria.</p> <p>Philippi, R.A. & Philippi, A.H.E. 1860. Coleoptera nonnulla nova Chilensia praesertim Valdiviana. Entomologische Zeitung 21:245-252. </p> <p>Rees, T. (compiler) (2021). The Interim Register of Marine and Nonmarine Genera. Available from <a href="https://www.irmng.org">https://www.irmng.org</a> at VLIZ. </p> <p>Schawaller, W. & Bremer, H.J. 2013: The termitophilous genus Asyleptus Péringuey, 1896 (Termitonebria Wasmann, 1925 syn. nov., Falsozialeus Pic, 1951 syn. nov.) and its tribal placement (Coleoptera: Tenebrionidae: Amarygmini). Annals of the Ditsong National Museum of Natural History 3: 81-83.</p> <p>Schawaller, W. 1998: Borneolaena gen. n. riedeli sp. n. from Sarawak, the first species of Laenini (Coleoptera: Tenebrionidae) from the Sunda Islands. Stuttgarter Beitraege zur Naturkunde serie A (biologie), 575: 1–8.</p> <p>Schawaller, W., 2002. Malayoscelis gen. n., the third genus of the Pycnocerini (Coleoptera: Tenebrionidae) from the Oriental Region. Acta zool. hung. 48, 197–202.</p> <p>Schawaller, W., 2010. Check-list of the Tenebrionidae (sensu stricto) from Madagascar (Coleoptera). Stuttgarter Beitrage zur Naturkunde A, Neue Serie 3, 277–289.</p> <p>Schawaller, W., 2013. Cossyphodini (Coleoptera: Tenebrionidae: Pimeliinae) in South Africa, Namibia and adjacent regions: New species and records, key to genera, and Old World species catalogue. Zootaxa 3721, 351. <a href="https://doi.org/10.11646/zootaxa.3721.4.3">https://doi.org/10.11646/zootaxa.3721.4.3</a> </p> <p>Schawaller, W., Bouchard, P., 2019. New Taxa of Phrenapatinae (Coleoptera: Tenebrionidae) from Southern Africa, with New Distributional Data and a Checklist of the Afrotropical Fauna. Annales Zoologici 69, 191. <a href="https://doi.org/10.3161/00034541ANZ2019.69.1.014">https://doi.org/10.3161/00034541ANZ2019.69.1.014</a> </p> <p>Silvestro, V.A., 2019. Revision of the Chilean Genus Diastoleus Solier (Coleoptera: Tenebrionidae), with a Preliminary Phylogenetic Analysis of the Tribe Scotobiini. annz 69, 113–131. <a href="https://doi.org/10.3161/00034541ANZ2019.69.1.007">https://doi.org/10.3161/00034541ANZ2019.69.1.007</a> </p> <p>Silvestro, V.A., Flores, G.E., 2012. Two new species of Emmallodera Blanchard, 1842 (Coleoptera: Tenebrionidae) from western Argentina. Zootaxa 3405, 64–68. <a href="https://doi.org/10.11646/zootaxa.3405.1.3">https://doi.org/10.11646/zootaxa.3405.1.3</a> </p> <p>Silvestro, V.A., Mendoza, A.E.G., Flores, G.E., 2015. Pumiliofossorum : A new genus of Scotobiini (Coleoptera: Tenebrionidae) with two new species from Peru, and a revised key for the genera of the tribe. Zootaxa 3986, 461–471. <a href="https://doi.org/10.11646/zootaxa.3986.4.5">https://doi.org/10.11646/zootaxa.3986.4.5</a> </p> <p>Spiessberger, E.L., Ivie, M.A., 2020. A New Genus and Fourteen New Species of Anopidiina (Coleoptera: Tenebrionidae: Diaperinae: Gnathidiini) from the West Indies. The Coleopterists Bulletin 74. <a href="https://doi.org/10.1649/0010-065X-74.4.667">https://doi.org/10.1649/0010-065X-74.4.667</a> </p> <p>Watt, J., & Triplehorn, C. 1991. A Review of the Genus Chaerodes (=Choerodes) White (Coleoptera: Tenebrionidae: Phaleriinae). The Coleopterists Bulletin, 45(1):86-88. <a href="http://www.jstor.org/stable/4008787">http://www.jstor.org/stable/4008787</a> </p> <p>Watt, J.C. 1992. Relationships of Actizeta and Cnemeplatiini (Coleoptera: Tenebrionidae). Systematic Entomology 17:287-299. <a href="https://doi.org/10.1111/j.1365-3113.1992.tb00339.x">https://doi.org/10.1111/j.1365-3113.1992.tb00339.x</a> </p> <p>Watt, J.C., 1992. Tenebrionidae (Insecta: Coleoptera): catalogue of types and keys to taxa, Fauna of New Zealand. Manaaki Whenua Press, Lincoln, New Zealand.</p>
EOL Earthworms Patch (EET) - obsolete
<p>Superseded by <a href="https://doi.org/10.5281/zenodo.13283222">EOL Annelida Patch</a></p> <p>Taxonomic hierarchies & species lists for Crassiclitellata, Haplotaxidae, Moniligastridae, Syngenodrilidae, Tiguassuidae to complement Catalogue of Life coverage.</p> <p>Compiled from multiple sources:</p> <p>Bantaowong, U., Chanabun, R., Tongkerd, P., Sutcharit, C., James, S.W., Panha, S., 2011. New earthworm species of the genus Amynthas Kinberg, 1867 from Thailand (Clitellata, Oligochaeta, Megascolecidae). Zookeys, 90: 35-62.</p> <p>Bantaowong, U., Chanabun, R., James, S.W., Panha, S., 2016. Seven new species of the earthworm genus Metaphire Sims and Easton, 1972 from Thailand (Clitellata: Megascolecidae). Zootaxa, 4117(1): 063-084.</p> <p>Blakemore, R.J., 2007. Checklist and phylogeny of Exxidae (Oligochaeta). European Journal of Soil Biology, 43: S9-S13.</p> <p>Blakemore, R.J., 2008. A Series of Searchable Texts on Earthworm Biodiversity, Ecology and Systematics from Various Regions of the World – 3rd Edition (2008) December, 2008, <a href="http://www.annelida.net/earthworm/" target="_blank" rel="nofollow noopener">http://www.annelida.net/earthworm/</a></p> <p>Blakemore, R.J., 2011. Further records of non-cryptic New Zealand earthworms. ZooKeys, 160: 23-46.</p> <p>Blakemore, R.J., 2013. Earthworms newly from Mongolia (Oligochaeta, Lumbricidae, Eisenia). ZooKeys, 285: 1–21.</p> <p>Blakemore, R.J., Chang, C.H., Chuang, S.C., Ito, M.T., James, S.W., 2006. Biodiversity of Earthworms in Taiwan: a Species Checklist with the Confirmation and New Records of the Exotic Lumbricids Eisenia fetida and Eiseniella tetraedra. Taiwania, 51 (3): 226-236.</p> <p>Blakemore, R.J., Park, T.S., Seo, H.Y., 2012. A new Korean earthworm (Oligochaeta: Megadrilacea: Megascolecidae). Zootaxa, 3368: 256-262.</p> <p>Buckley, T.R., James, S., Allwood, J., Bartlam, S., Howitt, R., Prada, D., 2011. Phylogenetic analysis of New Zealand earthworms (Oligochaeta: Megascolecidae) reveals ancient clades and cryptic taxonomic diversity. Molecular Phylogenetics and Evolution, 58: 85-96.</p> <p>Celis, L.V., Rangel-Ch, O., 2015. Two new earthworm species (Oligochaeta: Annelida) of the Caribbean region of Colombia. Zootaxa, 3974(1): 106–114.</p> <p>Cervantes, G., Fragoso, C., De Los Monteros, A.E., Sanchez-Ramos, G., Lara-Villalon, M., Yanez-Pacheco, M.J., Lazaro-Castellanos, J.O., James, S.W., 2016. New species of the earthworm genus Zapatadrilus (Clitellata, Acanthodrilidae) from northern Mexico. Zootaxa, 4189(2).</p> <p>Chanabun, R., Sutcharit, C., Tongkerd, P., Shau-Hwai, A.T., Panha, S., 2012. Three new species of semi-aquatic freshwater earthworms of the genus Glyphidrilus Horst, 1889 from Malaysia (Clitellata: Oligochaeta: Almidae). Zootaxa, 3458: 120-132.</p> <p>Chanabun, R., Sutcharit, C., Tongkerd, P., Panha, S., 2013. The semi-aquatic freshwater earthworms of the genus Glyphidrilus Horst, 1889 from Thailand (Oligochaeta, Almidae) with re-descriptions of several species. Zookeys, 265: 1-76. DOI: 10.3897/zookeys.265.3911</p> <p>Chanabun, R., Inkavilay, K., Panha, S., 2017. New species of semi-aquatic freshwater earthworm genus Glyphidrilus Horst, 1889 from Thailand and Laos (Oligochaeta, Almidae). ZooKeys, 672: 1-34 (03 May 2017), DOI: 10.3897/zookeys.672.10212</p> <p>Chang, C.H., Chuang, S.C., Wu, J.H., Chen, J.H., 2014. New species of earthworms belonging to the Metaphire formosae species group (Clitellata: Megascolecidae) in Taiwan. Zootaxa, 3774(4).</p> <p>Christoffersen, M.L., 2008. Species catalogue and phylogenetic relations of criodriloids and basal glossoscolecoids (Annelida Clitellata Lumbricina) from South America. Tropical Zoology, 21: 209-226.</p> <p>Christoffersen, M.L., 2009. Species diversity and distributions of microdrile earthworms (Annelida, Clitellata, Enchytraeidae) from South America. Zootaxa, 2065: 51-68.</p> <p>Csuzdi, Cs., 2012. Earthworm species, a searchable database. Opuscula Zoologica Budapest, 43: 97–99. <a href="http://earthworm.uw.hu/" target="_blank" rel="nofollow noopener">http://earthworm.uw.hu/</a></p> <p>Csuzdi, Cs., Tondoh, J.E, 2007. New and little-known earthworm species from the Ivory Coast (Oligochaeta: Acanthodrilidae: Benhamiinae and Eudrilidae). Journal of Natural History, 41(41–44): 2551–2567.</p> <p>Csuzdi, Cs., Mischis, C.C., 2009. Earthworms from Argentinean Patagonia with description of two remarkable new species (Oligochaeta: Acanthodrilidae, Lumbricidae and Megascolecidae). Journal of Natural History, 44(1-2): 31-40.</p> <p>Csuzdi, Cs., Pavlíček, T, 2011. A new earthworm genus Nouraguesia gen. nov. from French Guiana with description of two new species (Oligochaeta, Glossoscolecidae). Journal of Natural History, 45: 27, 1759-1767.</p> <p>Csuzdi, Cs., Zicsi A., Mısırlıoğlu, M., 2006. An annotated checklist of the earthworm fauna of Turkey (Oligochaeta: Lumbricidae). Zootaxa, 1175: 1–29.</p> <p>Csuzdi, Cs., Guei, M.A., Tondoh, J.E., 2009. New and little known earthworm species from the Mt. Nimba, Guinea (Oligochaeta, Acanthodrilidae: Benhamiinae). Zootaxa, 2141: 56-68.</p> <p>Csuzdi, Cs., Pop, V.V., Pop, A.A., 2011. The earthworm fauna of the Carpathian Basin with new records and description of three new species (Oligochaeta: Lumbricidae). Zoologischer Anzeiger, 250(1): 2-18.</p> <p>Csuzdi, Cs., Razafindrakoto, M., Blanchart, E., 2012. New and Little Known Giant Earthworms from Madagascar (Oligochaeta: Kynotidae). African Invertebrates, 52(2): 285-294.</p> <p>Csuzdi, Cs., Razafindrakoto, M., Blanchart, E., 2012. New and little known earthworm species from Central Madagascar (Oligochaeta: Kynotidae). Zootaxa, 3578: 36-42.</p> <p>Csuzdi, Cs., Sherlock, E., Talla Kouete, M., Doherty-Bone, T.M., 2015. Four new earthworm species from the highlands of Cameroon with description of a new genus Okudrilus gen. n. (Oligochaeta: Eudrilidae & Acanthodrilidae). African Invertebrates, 56(1): 25–38.</p> <p>Csuzdi, Cs., Pearlson, O., Pavlíček, T, 2017. New Acanthodrilus species from New Caledonia (Clitellata, Megadrili, Acanthodrilidae). Journal of Natural History, 51: 1-14, DOI: 10.1080/00222933.2017.1355500</p> <p>Csuzdi, Cs., Chang, C.-H., Pavlíček, T., Szederjesi, T., Esopi, D., Szlavecz, K., 2017. Molecular phylogeny and systematics of native North American lumbricid earthworms (Clitellata: Megadrili). PLoS ONE, 12(8): e0181504. DOI: 10.1371/journal.pone.0181504</p> <p>Csuzdi, Cs., Razafindrakoto, M., Hong, Y., 2017. Three new species of Kynotus from the Central Highlands of Madagascar (Clitellata, Megadrili). European Journal of Taxonomy, 336: 1-14, DOI: 10.5852/ejt.2017.336</p> <p>Csuzdi, Cs., James, S.W., Lapied, E. 2018. DriloBASE. World Earthworm Database. <a href="http://taxo.drilobase.org/" target="_blank" rel="nofollow noopener">http://taxo.drilobase.org</a></p> <p>Domínguez, J., Aira, M., Breinholt, J.W., Stojanovic, M., James, S.W., Pérez-Losada, M., 2015. Underground evolution: New roots for the old tree of lumbricid earthworms. Molecular Phylogenetics and Evolution, 83: 7–19.</p> <p>Domínguez, J., Aira, M., Porto, P.G., Díaz Cosín, D.J., Pérez-Losada, M., 2017. Multigene phylogeny reveals two new isolated and relic earthworm genera (Oligochaeta: Lumbricidae). Zoological Journal of the Linnean Society, 182: 258–274. DOI: 10.1093/zoolinnean/zlx031</p> <p>Dos Santos, B.T.S., Bartz, M.L.C., Hernandez-Garcia, L.M., Rousseau, G.X., Martins, M.B., James, S.W., 2017. New earthworm species of Righiodrilus (Clitellata, Glossoscolecidae) from eastern Amazonia. Zootaxa, 4242(2). DOI: 10.11646/zootaxa.4242.2.11</p> <p>Feijoo, M.A., Brown, G.G., James, S.W., 2017. New species of Andiorrhinus Cognetti, 1908 (Oligochaeta: Rhinodrilidae) from Venezuela and Brazil. Zootaxa, 4363(1): 55. DOI: 10.11646/zootaxa.4363.1.2</p> <p>Fragoso, C., Rojas, P., 2016. Lavellodrilus notosetosus sp. nov. (Annelida, Crassiclitellata, Acanthodrilidae): a new Mexican earthworm with uncommon characters, revealed by a preliminary revision of subfamily Acanthodrilinae. Zootaxa, 4154(2): 1.</p> <p>Hackenberger, D.K., Hackenberger, B.K., 2013. Checklist of the earthworm fauna of Croatia (Oligochaeta: Lumbricidae). Zootaxa, 3710(1): 001–030.</p> <p>Hendrix, P.F., 1995. Earthworm Ecology and Biogeography in North America. CRC Press.</p> <p>James, S.W., 2009. Revision of the earthworm genus Archipheretima Michaelsen (Clitellata: Megascolecidae), with descriptions of new species from Luzon and Catanduanes Islands, Philippines. Organisms Diversity and Evolution, 9(3): 244.e1-244.e16.</p> <p>James, S.W., 2012. Re-erection of Rhinodrilidae Benham, 1890, a senior synonym of Pontoscolecidae James, 2012 (Annelida: Clitellata). Zootaxa, 3540: 67-68.</p> <p>James, S.W., Davidson, S.K., 2012. Molecular phylogeny of earthworms (Annelida: Crassiclitellata) based on 28S, 18S and 16S gene sequences. Invertebrate Systematics, 26(2): 213-229.</p> <p>James, S.W., Gamiette, F., 2016. New species of Dichogaster Beddard, 1888 (Clitellata: Benhamiidae) with additional records of earthworms from Guadeloupe (French West Indies). Zootaxa, 4178(3), DOI: 10.11646/zootaxa.4178.3.5</p> <p>Jirapatrasilp, P., Prasankok, P., Sutcharit, C., Chanabun, R., Panha, S., 2016. Two new Cambodian semi-aquatic earthworms in the genus Glyphidrilus Horst, 1889 (Oligochaeta, Almidae), based on morphological and molecular data. Zootaxa, 4189(3): 543-558, DOI: 10.11646/zootaxa.4189.3.5</p> <p>Lehmitz, R., Römbke, J., Jänsch, S., Krück, S., Beylich, A., Graefe, U., 2014. Checklist of earthworms (Oligochaeta: Lumbricidae) from Germany. Zootaxa, 3866: 221-245.</p> <p>Marchán, D.F., Fernández, R., de Sosa, I., Sánchez, N., Díaz Cosín, D.J., Novo, M., 2018. Integrative systematic revision of a Mediterranean earthworm family: Hormogastridae (Annelida, Oligochaeta). Invertebrate Systematics, 32(3):652-671. DOI: 10.1071/IS17048</p> <p>Moreno, A.G., Borges, S., eds. 2004. Advances in Earthworm Taxonomy (Annelida: Oligochaeta). Editorial Complutense, Madrid.</p> <p>Narayanan, S.P., Sathrumithra, S., Christopher, G., Julka, J.M., 2017. New species and new records of earthworms of the genus Drawida from Kerala part of the Western Ghats biodiversity hotspot, India (Oligochaeta, Moniligastridae). ZooKeys, 691: 1-18, DOI: 10.3897/zookeys.691.13174</p> <p>Nxele, T.C., 2012. The megadrile fauna (Annelida: Oligochaeta) of Queen Elizabeth Park, South Africa: species composition and distribution within different vegetation types. African Invertebrates, 53(2): 543–558.</p> <p>Plisko, J.D., 2013. A new family Tritogeniidae for the genera Tritogenia and Michalakus, earlier accredited to the composite Microchaetidae (Annelida: Oligochaeta). African Invertebrates, 54(1): 69-92.</p> <p>Pop, V.V., Pop, A.A., Csuzdi, Cs., 2014. An annotated checklist of the Romanian earthworm fauna. Zoology in the Middle East, 58(4): 59-70, DOI: 10.1080/09397140.2012.10648985</p> <p>Razafindrakoto et al., 2017 — Razafindrakoto, M., Csuzdi, Cs., James, S., Blanchart, E., 2017. New earthworms from Madagascar with key to the Kynotus species (Oligochaeta: Kynotidae). Zoologischer Anzeiger, 268: 126-135.</p> <p>Reynolds, J.W., Wetzel, M.J., 2008. Terrestrial Oligochaeta (Annelida: Clitellata) in North America, including Mexico, Puerto Rico, Hawaii, and Bermuda. Megadrilogica, 12(12): 157-208.</p> <p>Reynolds, J.W., Wetzel, M.J., 2012. Terrestrial Oligochaeta (Annelida: Clitellata) in North America, including Mexico, Puerto Rico, Hawaii, and Bermuda. III. Megadrilogica, 15(8): 191-211.</p> <p>Reynolds, J.W., Wetzel, M.J. 2018. Nomenclatura Oligochaetologica. A Catalogue of Names, Descriptions and Type Specimens of the Oligochaeta. Second Edition. <a href="http://wwx.inhs.illinois.edu/people/mjwetzel/nomenoligo" target="_blank" rel="nofollow noopener">http://wwx.inhs.illinois.edu/people/mjwetzel/nomenoligo</a></p> <p>Schmelz, R.M., ed. 2012. Global diversity of earthworms and other Oligochaeta (Annelida): collected papers. Zootaxa 3458 103–119.</p> <p>Szederjesi, T., Vavoulidou, E., Chalkia, C., Danyi, L., Csuzdi, Cs., 2017. An annotated checklist of earthworms of Greece (Clitellata: Megadrili). Zootaxa, 4272(1): 57-82. DOI: 10.11646/zootaxa.4272.1.3</p> <p>Trakić, T., Valchovski, H., Stojanović, M., 2016. Endemic earthworms (Oligochaeta: Lumbricidae) of the Balkan Peninsula: a review. Zootaxa, 4189(2): 251-274.</p>
Patch metrics and landscape patterns of forest disturbances at the beginning of the 20th Century
<h1>Summary:</h1> <p>The database consists of a compressed .CSV file containing structural information of forest disturbance patches identified between 2002 and 2014 using the Global Forest Change Tree Cover Loss Year dataset version 1.6 (Hansen et al, 2013) available at https://earthenginepartners.appspot.com/science-2013-global-forest/download_v1.6.html. Each row in the database represents a patch (249,149,911 in total). The columns (15) represent the structural metrics calculated for each patch, as well as the landscape patterns identified using kmeans cluster analysis. </p> <p>The methods used for building this database are published in the paper: Acil, N., Sadler, J.P., Senf, C. <em>et al.</em> Landscape patterns in stand-replacing disturbances across the world’s forests. <em>Nat Sustain</em> <strong>8</strong>, 86–98 (2025). <a href="https://doi.org/10.1038/s41893-024-01450-3">https://doi.org/10.1038/s41893-024-01450-3</a></p> <p>Aggregated global maps of the patch metrics can be visualised in <a href="https://ee-treemort-disturbances-nacil.projects.earthengine.app/view/patchmetrics2002-2014">Google Earth Engine</a> and accessed in the asset "http://projects/ee-treemort-disturbances-nacil/assets/PatchMetrics_Means_nonLU_2002-2014/". </p> <p>Some of the scripts associated with this project are hosted in <a href="https://github.com/N-Acil/GlobalForestDisturbances_PatchMetrics">GitHub</a> and <a href="https://code.earthengine.google.com/?accept_repo=users/NXA807/%20GlobalForestDisturbances_PatchMetrics">Google Earth Engine</a>.</p> <p>Additional scripts and data will be made available upon request.</p> <p> </p> <p> </p> <h1>Database structure: </h1> <h2>Patch metrics</h2> <h3>Occurrence: </h3> <p>Patch form and year were retrieved from the Global Forest Change tree cover loss year dataset version 1.6 (Hansen et al, 2013).</p> <table> <tbody> <tr> <td><strong>Column name</strong></td> <td><strong>Description</strong></td> <td><strong>Unit</strong></td> <td><strong>Format</strong></td> <td><strong>Valid values</strong></td> </tr> <tr> <td><strong>PID</strong></td> <td>Patch unique identifier in the format Tile_Year_PatchNumber (e.g. 01U_02_00000001).</td> <td> </td> <td>Characters</td> <td> </td> </tr> <tr> <td><strong>X_INT_deg</strong></td> <td>Longitude of the patch's internal centroid</td> <td>Degrees</td> <td>Float</td> <td>[-180-180]</td> </tr> <tr> <td><strong>Y_INT_deg</strong></td> <td>Latitude of the patch's internal centroid</td> <td>Degrees</td> <td>Float</td> <td>[-90-90]</td> </tr> <tr> <td><strong>YEAR_maj</strong></td> <td>Year of patch majority occurrence. </td> <td> </td> <td>Integer</td> <td>[2-14]</td> </tr> <tr> <td><strong>YEAR_n</strong></td> <td>Number of years over which the patch exhibited continuous growth.</td> <td> </td> <td>Integer</td> <td>>0</td> </tr> </tbody> </table> <h3>Metrics: </h3> <p>These patch and landscape metrics were calculated from the patch delineated.</p> <table> <tbody> <tr> <td><strong>Column name</strong></td> <td><strong>Description</strong></td> <td><strong>Unit</strong></td> <td><strong>Format</strong></td> <td><strong>Valid values</strong></td> </tr> <tr> <td><strong>AREA_G_ha</strong></td> <td>Patch geodesic area</td> <td>Hectares</td> <td>Float</td> <td>>0</td> </tr> <tr> <td><strong>PERIM_G_m</strong></td> <td>Patch geodesic perimeter</td> <td>Meters</td> <td>Float</td> <td>>0</td> </tr> <tr> <td><strong>PARA</strong></td> <td>Perimeter-area ratio</td> <td> </td> <td>Float</td> <td>>0</td> </tr> <tr> <td><strong>SHAPE</strong></td> <td>Shape index</td> <td> </td> <td>Float</td> <td>>=1</td> </tr> <tr> <td><strong>ELONG</strong></td> <td>Elongation index</td> <td> </td> <td>Float</td> <td>[0-1[</td> </tr> <tr> <td><strong>FRAC</strong></td> <td>Fractal dimension index</td> <td> </td> <td>Float</td> <td>[1-2]</td> </tr> <tr> <td><strong>NN5000_T0_n</strong></td> <td>Number of patches assigned the same year within 5 km radius.</td> <td> </td> <td>Integer</td> <td>>0</td> </tr> <tr> <td><strong>NN5000_AREA_T0_perc</strong><strong><br></strong></td> <td>Percent of the total area disturbed over the period 2001-2018 within 5 km radius from the focal patch centroid.</td> <td>%</td> <td>Float</td> <td>[0-100]</td> </tr> </tbody> </table> <h3>Clusters:</h3> <p>Cluster identification was performed using AREA_G_ha, YEAR_n, SHAPE, ELONG, NN5000_T0_n and NN5000_AREA_T0_perc. </p> <table> <tbody> <tr> <td><strong>Column name</strong></td> <td><strong>Description</strong></td> <td><strong>Unit</strong></td> <td><strong>Format</strong></td> <td><strong>Valid values</strong></td> </tr> <tr> <td><strong>CLUSTER_CODE</strong></td> <td>Code assigned to each cluster</td> <td> </td> <td>Integer</td> <td>[1-4]</td> </tr> <tr> <td><strong>CLUSTER_LABEL</strong></td> <td>Name given to the cluster identified. </td> <td> </td> <td>Character</td> <td> <ul> <li>Small-isolated</li> <li>Clustered</li> <li>Complex</li> <li>Large-multiyear</li> </ul> </td> </tr> </tbody> </table> <p> </p>
Dataset from: Small-scale patches of detritus as habitat for invertebrates within a Zostera noltei meadow
<p>This dataset is related to "Small-scale patches of detritus as habitat for invertebrates within a <em>Zostera noltei</em> meadow" (Valentina Costa, Renato Chemello, Davide Iaciofano, Sabrina Lo Brutto, Francesca Rossi)</p>
Data from: Nest orientation and proximity to snow patches are important for nest site selection of a cavity breeder at high elevation
<p><strong>Abstract</strong></p> <p>Reproductive timing and location are central to breeding success across taxa. Many species have evolved specific strategies to cope with environmental variability including shifts in timing of reproduction tracking resource availability or selecting favourable nest location. In mountain ecosystems, complex topography and pronounced seasonality result in particularly high spatiotemporal variability of environmental conditions, and the risk of climate-induced resource mismatches is particularly acute given that temperature is increasing more rapidly than in the lowlands.<br>We investigated how a high-elevation passerine, the white-winged snowfinch <em>Montifringilla nivalis</em>, selects its nest site in relation to nest cavity characteristics, habitat composition and snow condition. We used a combination of field habitat mapping and satellite remote sensing to compare occupied nest sites with randomly selected pseudo-absence sites. In the first half of the breeding season, snowfinches preferred nest cavities oriented towards the morning sun while they used cavities proportional to their availability later on. This preference might relate to the nest microclimate offering eco-physiological advantages, namely thermoregulatory benefits for incubating adult and nestlings under the harsh conditions typically encountered in the alpine environment. Nest sites were consistently located in areas with greater-than-average snow cover at hatching date, likely mirroring the foraging preferences for tipulid larvae developing in meltwater along snowfields. Due to the particularly rapid climate shifts typical of mountain ecosystems, spatiotemporal mismatches between foraging grounds and nest sites are expected in the future, which may negatively influence demographic trajectories of the species concerned. The installation of well-designed nest boxes in optimal habitat configurations could to some extent help mitigate this risk.</p> <p> </p>
Image and label patches used to train GLASS-AI
<p>This archive contains the paired image and label patches used to train our machine learning pipeline, Grading of Lung Adenocarcinoma with Simultaneous Segmentation by Artificial Intelligence (GLASS-AI). </p> <p>Image patches were generated from whole slide images of H&E-stained sections using an Aperio ScanScope AT2 Slide Scanner (Leica) at 20x magnification with a 0.5022 microns/pixel resolution. The individual tumors and airways were annotated by an expert human before being divided into 224x224 pixel patches of the H&E image and paired annotation layer.</p> <p>For more details regarding how these data were used to train GLASS-AI, please see our forthcoming manuscript. </p>
Patch-level rates of nitrogen fixation and denitrification and environmental covariates from seven streams in Idaho and Michigan
We hypothesized that environmental variation at the patch scale (1 - 10’s m) would facilitate the co-occurrence of N2 fixation and denitrification through the formation of hot spots in streams. We measured rates of N2 fixation and denitrification and relative abundances of the genes nifH and nirS in patches determined by channel geomorphic units and substrate type in 4 Idaho and 3 Michigan streams encompassing a gradient of N and P concentrations. This data package includes patch-level measurements of N2 fixation and denitrification rates, relative gene abundances of nifH and nirS, and environmental covariates (nutrient concentrations, water temperature, surface and subsurface dissolved oxygen concentrations, organic matter content) that were used to explore the factors that could predict process rates and relative gene abundances across patches and streams.
Burn history and patch attributes
We present the recorded fire occurrences from 1967 to 2017 for 92 independent Florida Rosemary Scrub patches at Archbold Biological Station, Lake Placid, Florida. In addition, we include a series of habitat attributes, including patch area, patch isolation (described by the Hanski's index), and relative elevation, associated with those patches, as well as presence/absence data for Hypericum cumulicola, a Florida endemic plant.
Patch occupancy of stream fauna across a land cover gradient in the southern Appalachians, USA
Field sampling of four functionally important focal stream consumers within the Little Tennessee River Basin took place in thirty-seven stream reaches between May - July 2009. Sampled reaches all drained an area less than 17 km2, and land cover varied among these reaches. This data was used to model patch occupancy to examine factors that best predicted the prevalence of the four groups.
ABG01 Aboveground and belowground invertebrate biodiversity responses to patch-burn and annual burn grazing management at Konza Prairie (2021–2023)
This dataset contains aboveground invertebrate sampling and herbivory records from tallgrass prairie plots, documenting invertebrates and their chewing herbivory across multiple plots and transects in Patch Burn Grazing and Annual Burn Grazing Watersheds. It includes taxonomic identification to the family level, counts of individuals (by life stage: nymph or adult), percent herbivory on specified plant species, and collection metadata such as date, plot ID, watershed, and transect.
Physical and chemical characteristics of stream-associated snow patches in Fryxell Basin, McMurdo Dry Valleys, Antarctica during the 2021-2022 austral summer
Snow patches within and adjacent to stream channels in the Fryxell Basin of Taylor Valley, Antarctica were sampled during the 2021-2022 austral summer as part of the McMurdo Dry Valleys Long Term Ecological Research program. This data package includes snow pit measurements (snow temperature, depth, density, and water equivalent) as well as chemical characteristics of snow samples that were analyzed for nutrient, cation, and anion concentrations.
SBC LTER: Spatial definitions of giant kelp (Macrocystis pyrifera) patches in southern and central California
These data describe the spatial definitions of patches of giant kelp, Macrocystis pyrifera, in central and southern California, USA, using a 27-year time series of giant kelp canopy biomass from Landsat 5 Thematic Mapper satellite imagery (1984-2011). Giant kelp patches were delineated using a spatial synchrony-based method that avoids the consolidation of adjacent, independently fluctuating local populations into "megapatches". The method uses a network theory modularity approach to optimally cluster Landsat pixels into patches based on suitable habitat area (i.e., all areas containing giant kelp, 1984-2011) and the spatial synchrony of canopy biomass. These data were described in Cavanaugh, K. C., D. A. Siegel, P. T. Raimondi, and F. A. Alberto. 2014. Patch definition in metapopulation analysis: a graph theory approach to solve the mega-patch problem. Ecology 95:316-328. doi:10.1890/13-0221.1
Snakeweed Patch Vegetation Quad Data at the Sevilleta National Wildlife Refuge, NM (1984, 1996)
In 1984, a research project was initiated on a relatively small disturbance patch just south of Deep Well. This disturbance was thought to be the result of an old praire dog town, probably dating back to when a nearby ranch was active, and a lot of old mammal mounds remained in the disturbed area. One of the things that made the disturbance patch particularily noticeable was the lush growth of snakeweed (Gutierrezia sarothrae) within the patch. This prompted the designation of the disturbance patch as the "snakeweed patch" or "Gutierrezia patch." In addition, there was an obvious increase in bare ground and a shift in vegetation composition across the patch boundary. The dominant vegetation was not consistent around the boundary, with a marked dominance of black grama on the west side of the plot and a blue/black grama mix on the other three sides. To obtain information on the cause and/or effect of this disturbance, a survey of the soil and vegetation was performed. This database contains information collected during the vegetation monitoring that was done on the plot in 1984, as well as a follow-up measurement done in 1996. By 1996, virtually all of the snakeweed had died due to a dry period.
Dataset for "Topography-based statistical modelling reveals high spatial variability and seasonal emission patches in forest floor methane flux"
<p>This dataset provides measured and upscaled forest floor methane (CH4) fluxes and soil moisture.</p> <p>This dataset is related to the following manuscript:</p> <p>Vainio et al., Topography-based statistical modelling reveals high spatial variability and seasonal emission patches in forest floor methane flux, Biogeosciences, in review. (The discussion preprint is available at https://doi.org/10.5194/bg-2020-263.)</p>
Dataset: Information content of ultraviolet-reflecting color patches and visual perception of body coloration in the Tyrrhenian wall lizard Podarcis tiliguerta
<p>These are the data sets and R script corresponding to the scientific publication with the same title and authors.</p> <p>Description of these files is available in the file Note.pdf</p>
aps_linear_patches
<div> <div> <div> <div> <div> <div> <div> <p dir="auto">just use the command: aps_linear_patches('y',0, 'hgt', 'lonlat', 'phuw', [101.5 102.3], [ 29.34 39.92], isosata_parameter)</p> </div> </div> </div> </div> </div> </div> </div> <div> <div> <div> <div> <div> </div> </div> </div> </div> </div>
Net Methane Production Predicted by Patch Characteristics in a Freshwater Wetland
<p>Dataset supporting submitted research paper. "flux_patchdata<i>archive.csv" includes all plot-level data and is organized with sample locations and time in rows and data collected as headers in columns. "microbial</i>all.csv" includes only microbial taxonomic data collected from soils in each treatment. Other files include time series data from water level and temperature sensors deployed at each treatment (n=5). Refer to 'metadata.csv' for units and descriptions of data in each file. Data collected 2021-2022. Approved by all authors. </p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.