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GENEActiv accelerometer files collected during the project entitled "Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXIème siècle: exemple de la Nouvelle-Calédonie" [Eng: "Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia"] (anonymized version - third part)

<a title="GENEActiv" href="https://activinsights.com/technology/geneactiv/" target="_blank" rel="noopener">GENEActiv</a> accelerometer .csv files converted with a 1 second epoch from raw GENEActiv .bin files recorded during the project entitled "Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXIème siècle: exemple de la Nouvelle-Calédonie" [en: "Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia"]. Devices are 60-Hz triaxial accelerometers. This dataset also contains participantCharacteristics.csv that povides basic information about participants and read_a_binFile_share.R that is a short R code aiming at converting and saving accelerometer data from .bin files in 1 second epoch .csv files (consider the Methods section). Participant characteristics: 10 to 16 years old students and some parents. Number of participants: 231 (206 adolescents + 25 adults). Year of the study: 2018 - 2019. Place of the study: New Caledonia. The accelerometer .csv files with a 1 second epoch and extracted from raw .bin files are available in open datasets: <ul> <li><a title="Open dataset - first part" href="https://doi.org/10.5281/zenodo.12615468" target="_blank" rel="noopener">anonymized version - first part</a></li> <li><a title="Open dataset - second part" href="https://doi.org/10.5281/zenodo.12638746" target="_blank" rel="noopener">anonymized version - second part</a></li> <li><a title="Open dataset - third part" href="https://doi.org/10.5281/zenodo.12682660" target="_blank" rel="noopener">anonymized version - third part</a></li> </ul> The accelerometer raw .bin files are available in restricted datasets: <ul> <li><a title="Restricted dataset - first part" href="https://doi.org/10.5281/zenodo.11594645" target="_blank" rel="noopener">non-anonymized version - first part</a></li> <li><a title="Restricted dataset - second part" href="https://doi.org/10.5281/zenodo.12638965" target="_blank" rel="noopener">non-anonymized version - second part</a></li> <li><a title="Restricted dataset - third part" href="https://doi.org/10.5281/zenodo.12661429" target="_blank" rel="noopener">non-anonymized version - third part</a></li> </ul> Other participant characteristics (age, place of living, cultural community and socio-economic status) are available in a <a title="Information associated with GENEActiv accelerometer files collected during the project entitled "Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXIème siècle: exemple de la Nouvelle-Calédonie" [en: "Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia"] (non-anonymized information version)" href="https://doi.org/10.5281/zenodo.12195186" target="_blank" rel="noopener">restricted non-anonymized dataset</a>. When using this dataset, please cite the following reference: <a title="Wattelez et al. 2025" href="https://doi.org/10.1016/j.dib.2024.111228" target="_blank" rel="noopener">G. Wattelez, S. Frayon, O. Galy, Assessing physical activity/behavior of adolescents living in the Pacific with accelerometer data: 231 GENEActiv records in New Caledonia, Data in Brief 58 (2025) 111228, doi: 10.1016/j.dib.2024.111228</a>

embargoedcc-by-4.0Jun 2024View details →

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GENEActiv accelerometer files collected during the project entitled "Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXIème siècle: exemple de la Nouvelle-Calédonie" [Eng: "Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia"] (anonymized version - second part)

embargoedcc-by-4.0Jun 2024View details →

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CLDF dataset derived from Duong et al.'s "Language of the La Chí People" from 2020

Cite the source of the dataset as: <blockquote> Duong, Thu Hang and Nguyen, Thu Quynh and Nguyen, Van Loi (2021): The Language of the La Chí People in Bản Díu Commune, Xín Mần District, Hà Giang Province, Vietnam. In: Studies in the Anthropology of Language in Mainland Southeast Asia. Ed. by N. J. Enfield, Jack Sidnell, and Charles H. P. Zuckermann. University of Hawaii Press: Honolulu. 124-138 </blockquote>

opencc-by-4.0Jul 2021View details →

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Cows, Pigs and People: Example data of cubic insulin from three different species recorded on Diamond Light Source I24

Data collected at 100K on 10th May 2024 at I24 (Diamond Light Source) to investigate automatic grouping of datasets containing very subtle differences. Crystals grown by Cicely Tam following standard techniques with coordination from Felicity Bertram. For each of bovine, porcine, and human insulin, 10 degree wedges are included. Insulin from these three sources differ by 1-3 amino acids, but are otherwise structurally isomorphous.  The purpose of the data upload is to make data available for tutorials using the DIALS toolchain (see e.g. examples at https://github.com/graeme-winter/dials_tutorials) however data are available for all purposes without limitation.  Key: CIX - bovine insulin PIX - porcine insulin X - human insulin

opencc-by-4.0Oct 2024View details →

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INDICATORS TO EVALUATE THE LABOUR INSERTION OF PEOPLE WITH DISABILITIES IN CONVENTIONAL COMPANIES IN SPAIN: QUANTITIATIVE DATA SET OF DELPHI STUDY (PHASE 2 AND PHASE 3)

The level of labor integration of people with disability (PwD) is notably lower than that of people without disabilities. In order to evaluate the success of the labor market integration of people with disabilities, it is necessary to establish a series of indicators that go beyond hiring rates. Hence, the objective of this study is to develop a list of indicators with their specified individual weight that will serve to evaluate the success of the labor market insertion of PwD in conventional companies. Methodology: The Delphi method was used. PHASE 1 In Phase 1, an open-ended questionnaire was distributed to 48 human resources and disability experts.  PHASE 2 Based on the theoretical dimensions obtained, a list of 52 indicators was drawn up and the experts were asked to evaluate the importance of each item using a scale of 0 to 10 points. In addition, in this second questionnaire, they were encouraged to propose improvements in the final wording of the items, as well as in the relevance and denomination of the dimensions into which they had been grouped. No suggestions were received to modify the wording or to incorporate additional items. PHASE 3 Once the scores of all the participants had been collected, a third questionnaire was sent out with the aim of achieving a statistical consensus within the group of experts. In this questionnaire, each panel member was informed of their degree of agreement or disagreement in relation to the group as a whole, without revealing the identity of the other participants. In other words, each participant was provided with information on the average rating of the group and their own initial rating (from Phase 2) of each of the 52 indicators, offering them the option to modify their response if they considered it appropriate. If they chose to change their assessment, they were asked to justify their reasons. To assess the possible convergence of opinion, the change in the responses received in the third phase with respect to the second phase was analyzed. We examined whether there had been variations in the scores given by the experts in the second phase once the group's mean ratings had been received. For this purpose, the “proportion of experts” statistic was used to verify that the average value of the responses in this third phase was within a range from [-0.5 to +0.5], compared to the average value of the scores in the second phase. In the case of non-convergence of opinion, this methodology allows for as many rounds as necessary until convergence is achieved. THIS DATA SET COLLECT THE ANSWERS OF THE EXPERTS OF PHASE 2 AND PHASE 3.

opencc-by-4.0Oct 2024View details →

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Black Lives, British Justice: Black people in London Criminal Justice Records 1720-1841

This dataset brings together all 698 known references to ‘Black’ or possibly Black African heritage people or groups in records of London criminal justice (1720-1841). Each entry includes references to primary sources mentioning the person(s), including in the Old Bailey Proceedings, Ordinary’s Accounts, and Middlesex Criminal Registers. Individuals are trial witnesses, victims, defendants, and people mentioned in passing during testimony. For each entry, a confidence level is offered by the authors, as a person’s ethnicity cannot always be determined with certainty. Evidence for making that judgment is provided. This dataset is useful for anyone interested in Black history in Britain, Black people and justice, or Black London during the age of enslavement. Significant background material is available on the Old Bailey Online website, which provides additional context for these records. The authors also recommend the following works:     * Kathleen Chater. Untold Histories: Black People in England and Wales during the Period of the British Slave Trade, c. 1660-1807 (Manchester, 2011).     * Norma Myers, Reconstructing the Black Past (Frank Cass, 1996).     * Marika Sherwood. ‘Blacks in the Gordon Riots’, History Today, vol. 47 (1997), 24-28. Each record includes details on the name of the Black individual(s), as well as information on up to three sources in which he/she/they have been identified, and an indication by the authors on the likelihood the person is actually Black. Each entry has 17 columns of data, all of which are described in full in the ReadMe.txt file.

opencc-by-4.0Aug 2021View details →

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Multidimensional pain profiling in people living with obesity and attending weight management services: a protocol for a longitudinal cohort study

Please note: The final dataset will not be available until data collection has been completed in the Autumn of 2024. This dataset currently contains the following: 1. Details of the study, including authorship, ethical approval, funding, registration details, an abstract for the protocol of the study and details of data being collected (both in Microsoft Word and open access .txt formats) 2. Outline of the data in the process of collection (Microsoft Excel) 3. Ethical approval letters from relevant Research Ethics Committees (PDF)     Project Title: Multidimensional pain profiling in people living with obesity and attending weight management services: a longitudinal cohort study   Authors: Keith M. Smart1,2, Natasha Hinwood1, Colin G. Dunlevy3, Catherine Doody1, Catherine Blake1, Brona Fullen1, Jean O’Connell3, Carel W. Le Roux4, Clare Gilsenan5, Francis M. Finucane6,7, Gráinne O’Donoghue1.   Corresponding author: Natasha Hinwood Address: UCD School of Public Health, Physiotherapy and Sport Science, University College Dublin, Dublin, Ireland Email: <a href="mailto:natasha.hinwood@ucdconnect.ie">natasha.hinwood@ucdconnect.ie</a> Phone: +353 1 716 6511   Full name, department, institution, city, and country of all co-authors. 1UCD School of Public Health, Physiotherapy and Sport Science, University College Dublin, Dublin, Ireland 2Physiotherapy Department, St. Vincent’s University Hospital, Dublin, Ireland 3Weight Management Service, St Columcille’s Hospital, Dublin, Ireland 4Diabetes Complications Research Centre, University College Dublin, Dublin, Ireland 5Physiotherapy Department, Beaumont Hospital, Dublin, Ireland 6 School of Medicine, College of Nursing and Health Sciences, University of Galway 7Bariatric Medicine Service, Centre for Diabetes, Endocrinology and Metabolism, Galway University Hospitals   ORCID 1. Keith M. Smart: 0000-0002-1598-5215 2. Natasha Hinwood: 0000-0001-9382-716X 3. Colin G. Dunlevy: 4. Catherine Doody: 5. Catherine Blake: 0000-0002-0600-629X 6. Brona Fullen: 0000-0003-4408--2063 7. Carel W. Le Roux: 0000-0001-5521-5445 8. Jean O’Connell: 0000-0001-7241-8025 9. Clare Gilsenan: 10. Francis M. Finucane: 0000-0002-5374-7090 11. Gráinne O’Donoghue: 0000-0002-9126-2094     Project abstract (Protocol): Introduction: Pain is prevalent in people living with overweight and obesity. Obesity is associated with increased self-reported pain intensity and pain-related disability, reductions in physical functioning and poorer psychological well-being. People living with obesity tend to respond less well to pain treatments or management compared to people living without obesity. Mechanisms linking obesity and pain are complex and may variously include contributions from and interactions between physiological, behavioural, psychological, socio-cultural, biomechanical, and genetic factors. Our aim is to study the multidimensional pain profiles of people living with obesity, over time, in an attempt to better understand the relationship between obesity and pain.   Methods and analysis: This longitudinal observational cohort study will recruit (n=216) people living with obesity and who are newly attending three weight management services in Ireland. Participants will complete questionnaires that assess their multidimensional biopsychosocial pain experience at baseline and at 3, 6, 12 and 18-months post-recruitment. Quantitative analyses will characterise the multidimensional pain experiences and trajectories of the cohort as a whole and in defined sub-groups.   Ethics and dissemination: The study protocol has been approved by the Ethics and Medical Research Committee of St Vincent’s Healthcare Group, Dublin, Ireland (Reference No.: RS21-059) and the University College Dublin Human Research Ethics Committee (Reference No.: LS-E-22-41-Hinwood-Smart). Findings will be disseminated through peer-reviewed journals, conference presentations, public and patient advocacy groups, and social media.

opencc-by-4.0Dec 2022View details →

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Data for 'Nature's contributions to people and the Sustainable Development Goals in Nepal'

Title: Data for 'Nature's contributions to people and the Sustainable Development Goals in Nepal' Recommended Citation: Adhikari, B., Prescott, G., Urbach, D., Chettri, N., & Fischer, M. (2022). Nature’s contributions to people and the sustainable development goals in Nepal. Environmental Research Letters. https://doi.org/10.1088/1748-9326/ac8e1e Principal Investigator: Markus Fischer (markus.fischer@ips.unibe.ch) Authors: Biraj Adhikari (biraj.adhikari@ips.unibe.ch, ORCID: 0000-0002-4260-8706) Graham W Prescott (graham.prescott.research@gmail.com, ORCID:0000-0001-5123-514X) Davnah Urbach (davnah.payne@ips.unibe.ch, ORCID: 0000-0001-9170-7834) Nakul Chettri (nakul.chettri@icimod.org, ORCID: 0000-0002-3338-8879) Markus Fischer (markus.fischer@ips.unibe.ch, ORCID: 0000-0002-5589-5900) Date of data collection: November 2020 - August 2021 Location of data collection: Kathmandu, Nepal Article title: 'Nature's contributions to people and the Sustainable Development Goals in Nepal' R code available at: https://github.com/biraj-ad/r4dLiteratureReview_GithubRep Data Overview: 1. 'Literature_References.csv' List of 119 peer-reviewed journals and 21 grey literature documents used in the review. Each is assigned a unique identifier ("SN Ref") to link it to the other files. 2. 'Drivers_and_Trends.csv' The "Quote" column is the text from papers which has information on (i) trends in ecosystems or NCPs, and if available (ii) direct and/or indirect drivers causing the trends. The "Nature" column indicates which ecosystem (Forest, Farmland, Freshwater, Grassland, Others, and Directly to NCP), the "NCP" column indicates which NCP (categorized into 18 categories based on the IPBES classification) the text refers to. The "NCP Category" column indicates whether the said NCP is a regulating, material or non-material NCP.    We also categorized direct and indirect drivers based on the IPBES classification (Direct Drivers: Land-use Change, Climate Change, Direct Exploitation, Invasive Alien Species, and Pollution; Indirect Drivers: Institutions and Governance, Demographic and Sociocultural, Economic and Technological).     If there were more than one drivers of change for a particular NCP, we have included them in additional columns. In order to avoid multiple counts for trends of a particular NCP, we introduced the "TrendCount" column. For example, columns 3, 4 and 5 refers to the same trend of decreasing WQN, but has 3 Direct Drivers. Therefore, each TrendCount is given a weight of 0.33 so that the total trend adds upto 1. 3. 'NCP_to_SDG.csv' The "Quote" Column is the text from papers which has information on which NCP is contributing towards which SDG. "Remarks from text" are the authors' own remarks based on the text and the overall context of the article. The contribution of NCPs are classified as positive or negative, and indicated in the column "Effect (pos/neg)" The "NCP" column indicates which NCP (categorized into 18 categories according to IPBES) the text refers to, while the "Contribution to SDG" column indicates which SDG the NCP is contributing towards. The "Ecosystem" column indicates which ecosystem (Forest, Farmland, Freshwater, Grassland, Others) the NCP is being supplied from. Codes for NCPS: HAB (Habitat Creation and Maintenance), POL (Pollination and dispersal of seeds and other propagules), AIR (Regulation of Air Quality), CLI (Regulation of Climate), WQN (Regulation of Freshwater Quantity, Location, and Timing), WQL (Regulation of Freshwater and Coastal Water Quality), SOI (Formation, Protection, and Decontamination of Soils and Sediments), HAZ (Regulation of Hazards and Extreme Events), ORG (Regulation of Organisms Detrimental to Humans), NRG (Energy), FOD (Food and Feed), MAT (Materials and Assistance), MED (Medicinal, Biochemical, and Genetic Resources), INS (Learning and Inspiration), EXP (Physical and Psychological Experiences), IDE (Supporting Identities), and OPT (Maintenance of Options). 4. 'Data_consolidated.xlsx' The above three data files combined into one xlsx document

opencc-by-4.0Sep 2022View details →

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Covid-19 - Symptoms - Impact on quality of life and needs of affected people

Dataset « Covid-19 - Symptoms - Impact on quality of life and needs of affected people ». The data came from an online study involving a sample of 639 participants resident in France affected by COVID-19 symptoms several days, weeks or months after infection. It was collected to provide characterization of a wide range of symptoms of COVID-19, their effects on quality of life and the needs of those affected.

opencc-by-4.0May 2023View details →

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Mapping the planet's critical areas for biodiversity and people

Data associated with "Mapping the planet's critical areas for biodiversity and people" Abstract: Meeting global commitments to conservation, climate, and sustainable development requires consideration of synergies and tradeoffs among targets. We evaluate the spatial congruence of ecosystems providing globally high levels of nature’s contributions to people, biodiversity, and areas with high development potential across several sectors. We find that conserving approximately half of global land area through protection or sustainable management could provide 90% of the current levels of ten of nature’s contributions to people and meet minimum representation targets for 26,709 terrestrial vertebrate species. This finding supports recent commitments by national governments under the Global Biodiversity Framework to conserve at least 30% of global lands and waters, and proposals to conserve “half Earth”. More than one-third of areas required for conserving nature’s contributions to people and species are also highly suitable for agriculture, renewable energy, oil and gas, mining, or urban expansion. This indicates potential conflicts among conservation, climate and development goals. This dataset contains code and outputs of spatial optimizations run using prioritizr (https://prioritizr.net/index.html). R code used to run the spatial optimizations is contained in a zipfile named "code.zip". Output data includes raster files (TIF format). Raster values are 0-1, where 1 means the grid cell was selected to achieve a particular target, 0 means the grid cell was not selected, and values between 0 and 1 indicate a grid cell was partially selected. Three variations of the spatial optimization were run. Each TIF or ZIP file contains the outputs from one of these variations: <ol> <li>NCP (Nature's contributions to people) only <ol> <li>File name: NCP_only_2km.zip (ZIP file)</li> </ol> </li> <li>NCP and biodiversity, prioritization run at 10km then masked to natural and semi-natural habitat at 2km <ol> <li>File names: es00bio1_nathab_mask.tif, es05bio1_nathab_mask.tif, etc. (TIF files)</li> </ol> </li> <li>NCP and biodiversity, with protected areas and OECM (WDPA) locked in <ol> <li>File name: NCP_biod_WDPA_nathab.zip (ZIP file)</li> </ol> </li> </ol> Within each variation, 19 different spatial optimizations were run, with NCP targets ranging from 5%-95% in 5% increments. <ul> <li>Raster filenames within ZIP files indicate the NCP (ecosystem service) target (for example, es05 indicates a target of 5%)</li> <li>Whether biodiversity was included or not (for example, bio1 indicates biodiversity was included, bio0 indicates it was not)</li> </ul> Two additional TIF files were included, which are the result of summing the rasters from the above scenarios. Raster values range from 0-19, where 19 indicates grid cells selected in all scenarios, 0 indicates grid cells selected in 0 scenarios. Higher values (e.g. 19) indicate cells with the highest levels of NCP globally in the least amount of area. These rasters were used to create Figure 2 in the paper. <ol> <li>NCP_only_2km_sum - NCP only scenario, all rasters summed.</li> <li>NCP_biod_nathab_sum - NCP and biodiversity scenario, masked to natural habitat, all rasters summed.</li> </ol> Additional files include: <ol> <li>dpi.tif - Development Potential Index raster</li> <li>dpi_key.csv - legend describing the DPI raster values</li> <li>HDP_DriverCats.tif - High Development Potential areas disaggregated by sector (raster)</li> <li>HDP_DriverCats_key.csv - legend describing the HDP raster values</li> <li>es90bio1_hdp_drivers_multiply.tif - raster resulting from the combination of the prioritized areas for NCP and biodiversity combined with High Development Potential areas for each economic sector (key is the same as for HDP raster)</li> <li>nathab_2km_WGS84.tif - raster with natural and semi-natural habitat mask (based on ESA 2015 land cover) (2 km)</li> </ol>

opencc-by-4.0Sep 2022View details →

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Artifacts supplementing the ACM DTRAP 2020 article "Will You Trust This TLS Certificate? Perceptions of People Working in IT (extended version)"

These research artifacts supplement the following two publications: <ul> <li>Will You Trust This TLS Certificate? Perceptions of People Working in IT [ACSAC 2019], DOI 10.1145/3359789.3359800, more details at https://crocs.fi.muni.cz/public/papers/acsac2019</li> <li>Will You Trust This TLS Certificate? Perceptions of People Working in IT (extended version) [ACM DTRAP 2020], DOI 10.1145/3419472, more details at https://crocs.fi.muni.cz/public/papers/dtrap2020</li> </ul> The artifacts contain the full experimental setup (as described in Section 2.1 of the paper) and the complete anonymized dataset underlying the evaluation presented in Sections 3 and 4. The experimental setup contains the documents accompanying the task: the informed consent, pre-task questionnaire, task description, trust scales, and the list of questions posed during the post-task interview (all in PDFs). We further include the custom website with certificate validation documentation for the “redesigned” condition (static HTML). While working on the task, participants in the “redesigned” condition could access this website via a link that was in the redesigned error messages. Furthermore, we provide the software with which the participants interacted.  It contains the displayed error messages and validated certificates. These things are available both individually and incorporated in a snapshot of a virtual machine used at the experiment (importable directly into VirtualBox). The collected data is presented in a single dataset (SPSS format; you can use PSPP as a free alternative). It includes the analysis syntax files to obtain the numerical results presented in the paper. For each participant, the dataset contains: 1) pre-task questionnaire answers, 2) reported trust ratings, 3) sub-task timing, 4) information on whether they browsed the Internet and 5) the interview codes assigned. Note that we do not publish the interview transcripts to preserve participant privacy.

opencc-by-4.0Jul 2019View details →

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Public perceptions of an avian reintroduction aiming to connect people with nature

Full raw dataset (quantitative and qualitative) and R code for quantitative analyses, associated with the publication "Public perceptions of an avian reintroduction aiming to connect people with nature" People and Nature. Survey responses are presented here anonymised. Please note that where the term 'Proactive' sample is used this is referred to as the 'Self selecting' sample in the associated journal article.

opencc-by-4.0Aug 2023View details →

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Data for ms. Do people really care less about their cats than about their dogs? A comparative study in three European countries

The present dataset is based on a questionnaire which is also part of this package. The enclose questionnaire includes  identifiable and relevant variables names (yellow highlighted). Participants were recruited by Norstat, a European-based survey company, with the aim of gaining a representative sample of Austrian, Danish and UK citizens, including pet owners. The survey company administers and hosts online panels comprising citizens from many European countries. We aimed for a sample that is representative in terms of age, gender, and region. Therefore, a stratified sampling principle was set up where individuals within each stratum were randomly invited to participate. The invitations were issued through e-mail that contained a link to the online questionnaire. Data was collected from 11-25th of March 2022 in Austria, from 11-24th of March 2022 in Denmark and from 8-23rd of March 2022 in the UK. The invitation provided information about the background of the study, the participating universities, ethical approval, estimated time for questionnaire completion and further, participants were informed that the completion of the questionnaire was voluntary and anonymous, and that they could exit the survey at any point. Before participants were directed to the survey, they ensured informed consent by confirming that they are over 17 years old, and consent to participate in this survey.  Besides the questionnaire the dataset includes a csv and an Excel file consisting of the data that is used in the ms. and an rtf and a pdf file with data variable names/labels, and value labels.

opencc-by-4.0Jun 2023View details →

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Characterization of the anti-spike IgG immune response to COVID-19 vaccines in people with a wide variety of immunodeficiencies

Participants submitted saliva using the OME-505 collection device (OMNIgene Oral, Ottawa, Canada) every two weeks from vaccination through six months post-dose 3 to detect breakthrough SARS-CoV-2 infections. Viral RNA was extracted using the NucliSENS easyMag automated extraction system from 200ul of saliva in stabilizing solution and eluted in a total volume of 50ul. First strand cDNA synthesis was performed from 5ul of eluted RNA using SuperScript IV VILO Master Mix (Thermo Fisher). Positive specimens were then sequenced. Multiplex tiled amplicon libraries were prepared using the Midnight panel and Rapid barcoding kit RBK-004 (Oxford Nanopore technologies) using previously published protocol. Twelve sample pooled libraries were sequenced on a GridION X5 nanopore sequencer using Flongle adapters. After sequencing, raw data were processed using interARTIC to generate consensus sequences and variant calls. SARS-CoV-2 lineages were determined using these consensus sequences and the NextClade and Pangolin platforms.

opencc-by-4.0Mar 2023View details →

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ROB 2 assessments_Convalescent plasma or hyperimmune immunoglobulin for people with COVID-19_a living systematic review

Risk of bias assessments and support for judgement with ROB 2 tool for the Cochrane Review: Convalescent plasma or hyperimmune immunoglobulin for people with COVID-19:a living systematic review (Version 3).

opencc-by-4.0Oct 2020View details →

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International Day of the World's Indigenous Peoples in Yakutsk (2019)

Photos taken during the celebration of the International Day of the World's Indigenous Peoples in Yakutsk (8th August 2019).

opencc-by-nc-nd-4.0Nov 2020View details →

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Resting-State High-Density EEG using EGI GES 300 with 256 Channels of Healthy Elders, People with Subjective and Mild Cognitive Impairment and Alzheimer's Disease

This repository contains Matlab files including 4 samples of resting-state EEG recording for Alzheimer's Disease (AD), Mild Cognitive Impairment (MCI), Subjective Cognitive Decline (SCD), and Healthy Controls (HC) using the HD-EEG EGI GES 300. [AD: i108, MCI: i100, SCD: i090, HC: s055]   Participants & Settings In total 230 participants have been recruited from the memory and dementia clinic of the Greek Association of Alzheimer’s Disease and Related Disorders (GAADRD) and the 1st Department of Neurology, U.H. AHEPA, Aristotle University of Thessaloniki, Greece. The full dataset includes: Healthy Controls Elders (60+ years old): 33 participants Subjective Cognitive Decline: 34 participants Mild Cognitive Impairment: 79 participants Alzheimer's Disease: 48 participants Healthy Young (25-40 years old): 36 participants The study was carried out in accordance with the Declaration of Helsinki and received approval by the Scientific and Ethics Committee of GAADRD (No56_27/11/2016), and written informed consent was obtained from all participants prior to their participation in the study. The diagnosis of AD was conducted by a neuropsychiatrist according to their medical history, neuropsychological performance, structural magnetic resonance imaging (MRI), and clinical and neurological examinations. Participants with AD fulfilled the National Institute of Neurological and Communication Disorders and Stroke/Alzheimer’s Disease and Related Disorders Association (NINCDS-ADRDA) criteria for probable AD, as well as the Diagnostic and Statistical Manual of Mental Disorders (DSM-V) criteria for dementia of Alzheimer’s type (American Psychological Association, 1994). On the other hand, the MCI participants fulfilled the Petersen criteria, while the SCD group met International Working Group-2 guidelines and the recent National Institute on Aging-Alzheimer’s Association workgroups on diagnostic guidelines for Alzheimer’s disease (NI-AA), as well as the SCD-I Working Group instructions.  Resting-State EEG Recording Fifteen-minute resting EEG activity was recorded for all the participants. For the whole duration of the resting state EEG recording, participants were advised to keep themselves relaxed as much as possible, close their eyes and open them after the researcher’s demand, sit still, minimize blinking or mouth movements and let their mind wander. The experimental procedure was monitored by a research assistant aiming to identify cases of horizontal eye movements, continued blinking, or excessive movement by visually inspecting the EEG traces during the experiment. More specifically, an EEG was registered for both resting conditions (eyes open, EO and eyes closed, EC) for at least 2–3 min for each period. EEG Data Acquisition The EEG data were collected by using the EGI 300 Geodesic EEG system (GES 300, CERTH-ITI, Thessaloniki, Greece) with a 256-channel HydroCel Geodesic Sensor Net (HCGSN) and a sampling rate of 250 Hz (EGI Eugene, OR). Moreover, the researcher placed the electrodes in accordance with the 256 HCGSN adult 1.0 montage system, while the signals were recorded relative to a vertex reference electrode (Cz), with AFz as the ground electrode with the electrodes’ impedance below 50 kΩ throughout the experimental procedure, as recommended for the high-input impedance amplifier. In detail, the HD-EEG data were analyzed offline in order to detect any artifact, as well as to conduct pre-processing (filtering, segmentation, bad channel replacement) using Net Station 4.3 software (EGI). HD-EEG data were initially filtered with a 5th-order bandpass Butterworth IIR filter of 0.3–30 Hz. Once the segmentation was completed, the detection of artifacts was performed by using the Net Station artifact detection tool for the automatic detection of excessive eye blinking and movement. Afterward, the signals were baseline corrected using 200 msec before the start of the experiment period and average re-referenced to transform them into reference-independent values.   Full Dataset Access More information about the sample dataset and access to the full dataset can be available after request via e-mail: Ioulietta Lazarou BSc, MSc, PhD candidate Neuropsychologist - Clinical Research Associate  Centre for Research and Technology Hellas (CERTH), Information Technologies Institute (ITI) 6th km Charilaou-Thermi Road, P.O. Box 60361, 57001 Thermi-Thessaloniki, Greece E-mail: <a href="mailto:iouliettalaz@iti.gr">iouliettalaz@iti.gr</a>

opencc-by-4.0Dec 2020View details →

zenodo40/100

Supplementary material 1: Reviewer Comments from: Widening the circle of care: An arts-based, participatory dialogue with stakeholders on cancer care for First Nations, Inuit, and Métis peoples in Ontario, Canada - Research Ideas and Outcomes 2: e9115 (25 May 2016) https://doi.org/10.3897/rio.2.e9115

The attached file includes the evaluation of the postdoctoral fellowship application from three reviewers. Guidelines for reviewers are available online for more inforamtion (http://www.cihr-irsc.gc.ca/e/33043.html), including the rating scale that is used to score each section of the evaluation.

opencc-by-4.0Feb 2017View details →

zenodo40/100

Can accurate demographic information about people who use prescription medications non-medically be derived from Twitter?

This archive contains over 3 billion Tweet IDs associated with the paper: "Can accurate demographic information about people who use prescription medications non-medically be derived from Twitter?" The data provides: X (Twitter) IDs of posts included in the study. The IDs can be used to retrieve the original posts via the Twitter API. Posts removed by the original subscribers or whose visibilities are no longer public cannot be retrieved by the poster.  Full citation: Yang YC, Al-Garadi MA, Love JS, Cooper HLF, Perrone J, Sarker A. Can accurate demographic information about people who use prescription medications nonmedically be derived from Twitter? Proc Natl Acad Sci U S A. 2023 Feb 21;120(8):e2207391120. doi: 10.1073/pnas.2207391120. Epub 2023 Feb 14. PMID: 36787355; PMCID: PMC9974473. Python scripts related to the analysis are available as supplementary material with the paper.  Contact:  Abeed Sarker abeed@dbmi.emory.edu Funding: National Institute on Drug Abuse (R01DA057599).

opencc-by-4.0Dec 2022View details →

zenodo40/100

Datasets for Metagenome-wide characterization of shared antimicrobial resistance genes in sympatric people and lemurs in rural Madagascar

These datasets accompany the analyses conducted under the study title "Metagenome-wide characterization of shared antimicrobial resistance genes in sympatric people and lemurs in rural Madagascar" Accompanying R scripts with commentary to run these data can be found in the Github repository under release v1.0.0: https://github.com/bmtalbot/Humans_and_Lemurs_2017

opencc-by-4.0Dec 2023View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas

neuroscienceopenDocumentation, web resources, and API references are available online.

Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage

behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.

Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb

electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.

Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl

behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.

Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro

neuroscienceopenPublished datasets are available on demand over the internet.

Last verified 2026-04-29Open record