Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
8,454
datasets available to search
ShareScore release 0.9.0
Dataset results
8,454 results for “potential”
Monthly time series of rainfall, potential evapotranspiration and streamflow for 201 catchments in South-East Australia
<p>The data set contains data for 201 catchments located in South-Eastern Australia. The data was extracted from the datasets collated by Lerat, Thyer et al. (2020) including rainfall and potential-evapotranspiration data obtained from the Bureau of Meteorology Australian Water Outlook website (Frost, Ramchurn et al. 2016) and streamflow data obtained from the Bureau of Meteorology Water Data Online website (Bureau of Meteorology 2019). The data was collected over the period from 1980 to 2018, split into the two sub-periods 1980-1999 (Period 1) and 1999-2018 (Period 2).</p><p> </p><p>Bureau of Meteorology. (2019). "Water Data Online." from <a href="http://www.bom.gov.au/waterdata">http://www.bom.gov.au/waterdata</a>.</p><p>Frost, A. J., A. Ramchurn and A. Smith (2016). "The bureau's operational AWRA landscape (AWRA-L) Model." Bureau of Meteorology Technical Report.</p><p>Lerat, J., M. Thyer, D. McInerney, D. Kavetski, F. Woldemeskel, C. Pickett-Heaps, D. Shin and P. Feikema (2020). "A robust approach for calibrating a daily rainfall-runoff model to monthly streamflow data." Journal of Hydrology<strong>591</strong>: 125129.</p>
ALL-READY Questionnare on potential drivers and barriers to the adoption of innovation management, open science, and Intellectual Property Rights (IPR) among the members of the Pilot Network
<p><strong>Background & Summary</strong>: </p><p>The ALL-READY project unites a diverse consortium of Research Infrastructures (RI) and Living Labs, instrumental in developing new methodologies and technologies in agroecology. The project focuses on effective management of innovation, adherence to open science principles, and strategic application of Intellectual Property Rights (IPR). Task 6.4 of the project, which concentrates on Innovation and IPR Management, seeks to understand the dynamics influencing the adoption of these practices among its members. Recognizing the need for end-to-end data management, the project emphasizes standardized data collection and management while adhering to FAIR principles.</p><p><strong>Methods</strong>: </p><p>The questionnaire was developed by LifeWatch ERIC to capture data reflecting current practices and perceptions in agroecology. It included 26 questions divided into four sections, focusing on existing practices, potential drivers, and barriers in innovation management, open science, and IPR. The survey was disseminated via an online platform to the ALLREADY Pilot Network, ensuring a representative sample from diverse organizations. The data collection process was closely monitored, and the responses were analyzed using a mixed-methods approach to extract meaningful insights.</p><p><strong>Data Records of the ALLREADY Project Questionnaire</strong>: </p><p>The dataset, collected through an online survey platform, underwent a meticulous process of data preparation, download, formatting, and anonymization. It consists of one text file containing metadata (Readme.txt) and a single CSV file encompassing all questionnaire responses. The dataset provides a comprehensive view of innovation management, open science adoption, and IPR handling within the agroecology sector, particularly among the network of RIs and Living Labs involved in the project.</p><p><strong>Technical Validation of the ALLREADY Project Questionnaire</strong>: </p><p>Several critical steps were taken to ensure the accuracy, reliability, and overall quality of the data collected. This included development and testing of the questionnaire, rigorous monitoring of the data collection process, and thorough checks for data quality and completeness. The representativeness of the sample was analyzed specifically with respect to the Pilot Network rather than the broader population involved in agroecology. Strategies were employed to counter survey fatigue and maintain respondent engagement.</p><p><strong>Usage Notes for the ALLREADY Project Questionnaire</strong>: </p><p>The dataset's proper usage is vital for ensuring the validity and reproducibility of research. Researchers are advised to consider the nature of the data, the representativeness of the dataset, and its generalizability. The dataset allows for comprehensive analysis and integration of different sections, and analysts have the flexibility to handle open and write-in responses according to their research needs. Additional information to facilitate analysis is provided in a separate documentation file.</p><p> </p>
Potential forest conservation value rasters for Denmark from Assmann et al. "LiDAR data fusion and machine learning identify temperate forests of high conservation value"
<p>Potential forest conservation value (high / low) rasters for Denmark based on a remote sensing data fusion approach. Please see manuscript (below) for a detailed description of the methods and data products. </p> <p><br>Jakob J. Assmann, Pil B. M. Pedersen, Jesper E. Moeslund, Cornelius Senf, Urs A. Treier, Derek Corcoran, Zsófia Koma, Thomas Nord-Larsen, Signe Normand. In prep. LiDAR data fusion and machine learning identify temperate forests of high conservation value.</p> <p><br>When using the data, please cite the above manuscript. </p> <p><br>Files description:</p> <ul> <li>Compressed and cloud optimised rasters of potential forest conservation value projections for Denmark (10 m res.) in EPSG:3857 <ul> <li>forest_quality_ranger_biowide_10m_cog_epsg3857.tif RandomForest model projections based on BIOWIDE stratification (!! best performing model !!)</li> <li>forest_quality_ranger_sustainscapes_10m_cog_epsg3857.tif RandomForest model projections based on SustainScapes stratification</li> <li>forest_quality_gbm_biowide_10m_cog_epsg3857.tif GBM model projections based on BIOWIDE stratification</li> <li>forest_quality_gbm_sustainscapes_10m_cog_epsg3857.tif GBM model projections based on SustainScapes stratification</li> </ul> </li> </ul> <p> </p> <ul> <li>Aggregated rasters of potential forest conservation value projections for Denmark (100 m res.) in EPSG:25832 <ul> <li>forest_quality_ranger_biowide_100m.tif RandomForest model projections based on BIOWIDE stratification (!! best performing model !!)</li> <li>forest_quality_ranger_sustainscapes_100m.tif RandomForest model projections based on SustainScapes stratification</li> <li>forest_quality_gbm_biowide_100m.tif GBM model projections based on BIOWIDE stratification</li> <li>forest_quality_gbm_sustainscapes_100m.tif GBM model projections based on SustainScapes stratification </li> </ul> </li> </ul> <p> </p> <ul> <li>Uncompressed and tiled rasters of potential forest conservation value projections for Denmark (10 m res.) in EPSG:25832<br>Please note: the archives contain approx. 42k tiles, each 10 x 10 km, as well as a VRT file for covenient loading. <ul> <li>forest_quality_ranger_biowide_10m.zip RandomForest model projections based on BIOWIDE stratification (!! best performing model !!)</li> <li>forest_quality_ranger_sustainscapes_10m.zip RandomForest model projections based on SustainScapes stratification</li> <li>forest_quality_gbm_biowide_10m.zip GBM model projections based on BIOWIDE stratification</li> <li>forest_quality_gbm_sustainscapes_10m.zip GBM model projections based on SustainScapes stratification</li> </ul> </li> </ul>
Organic Matter, Geochemical, Visible Spectrocolorimetric Properties, Radiocesium Properties, and Grain Size of Potential Source Material, Target Sediment Core Layers and Laboratory Mixtures for Conducting Sediment Fingerprinting Approaches in the Mano Dam Reservoir (Hayama Lake) Catchment, Fukushima Prefecture, Japan
<p>The current dataset was compiled to study sediment fingerprintings practices, i.e tracer selection and contribution modelling. Organic matter, elemental geochemistry, visible difuse spectrocolorimetric properties, radiocesium properties, and grain size were analysed were analysed in potential source material that may supply sediment to coastal rivers, here the upper part of the Mano river, draining the main Fukushima radioactive pollution plume (Japan). Four potential soil source materials (<em>n</em> = 68) were considered: undecontaminated cropland (<em>n</em> = 24), as non-decontaminated soil before the application of local decontamination policies, remediated cropland (<em>n</em> = 10), as decontaminated soil after the application of local decontamination policies, forest soils (n = 24) and subsurface material originating from channel bank collapse or landslides (<em>n</em> = 10; referred to as subsoil). A sediment core was collected in the Mano Dam lake (Hayama lake) on the 6th June 2021 and was sectionned into 1-cm layers (<em>n</em> = 38). Laboratory mixtures (<em>n</em> = 27) were made to assess different contribution levels from the sources.</p> <p>The current dataset comprises four .csv files including data and metadata information and their respective descriptions of variables. The data set is composed of soil samples, sediment core layer and laboratory mixtures. Laboratory mixtures were prepared to provide a dataset to calibrate/validate un-mixing models implemented to address this research question and analysed in the same conditions and using the same equipment as the source/target material.</p> <p>Recommended encoding format: <strong>latin1</strong></p>
Energy Harvesting Using a Nonlinear Resonator with Asymmetric Potential Wells
<p><strong>This repository contains</strong> the results of numerical simulations of a nonlinear bistable system for harvesting energy from ambient vibrating mechanical sources. Detailed model tests were carried out on an inertial energy harvesting system consisting of a piezoelectric beam with additional springs attached. The mathematical model was derived using the bond graph approach. Depending on the spring selection, the shape of the bistable potential wells was modified including the removal of wells’ degeneration. Consequently, the broken mirror symmetry between the potential wells led to additional solutions with corresponding voltage responses. The probability of occurrence for different high voltage/large orbit solutions with changes in potential symmetry was investigated. In particular, the periodicity of different solutions with respect to the harmonic excitation period were studied and compared in terms of the voltage output. The results showed that a large orbit period-6 subharmonic solution could be stabilized while some higher subharmonic solutions disappeared with the increasing asymmetry of potential wells. Changes in frequency ranges were also observed for chaotic solutions.</p>
Datasets from study: "Land surface observations boost temperature forecast skill: experiments using Long Short-Term Memory surrogate for physics-based models to assess potential predictability"
<p>This repository contains the datasets needed to reproduce the figures from manuscript: Land surface observations boost temperature forecast skill: experiments using Long Short-Term Memory surrogate for physics-based models to assess potential predictability.</p> <p>In this study, we examine the potential of land surface temperature and vegetation data, which are not routinely assimilated in NWP models, for enhancing temperature forecast skill. We build surrogate models for NWP using Long Short-Term Memory.</p>
Momentum space wave functions for the linear potential
<p>Normalized momentum space wave functions for the linear potential. The Schrödinger equation was solved with the methods described in "A simple high-accuracy method for solving bound-state equations with the Cornell potential in momentum space", Alfred Stadler, Elmar P. Biernat, Vasco Valverde. </p> <table> <tbody> <tr> <td><a href="https://arxiv.org/abs/2407.21789">arXiv:2407.21789</a> [hep-ph]</td> </tr> </tbody> </table> <p>(to be pulished in Physical Review D)</p> <p>The wave functions correspond to the energie eigenvalues shown in Table VI of this work.</p> <p>The name of each file indicates the orbital angular momentum and which eigenstates it contains. For instance, wf_n1-5_l=0_np=1000_NL=5.txt contains the wave functions of the states n=1, 2, 3, 4, 5 for l=0, and wf_n6-10_l=3_np=1000.txt the wave functions of the states n=6, 7, 8, 9, 10 for l=3. Furthermore, np=1000 means that 1000 momentum integration points were used for the solution of the Schrödinger equation, and NL=5 or NL=15 means that 5 or 15 points were used for the Lagrange interpolations.</p> <p>Each data file in text format contains 6 columns and 1000 lines. Column 1 ist the momentum (GeV), columns 2-6 the wave functions. The momenta were generated according to Eq. (4.3) of the article, with p_0=1.</p> <p> </p>
Integrated Datasets for analyses on potentially hazardous locations for women in Valencia, Dublin, San Francisco, and Toluca
<p>This dataset provides a compilation of the data used to analyze and identify potentially dangerous<br>places for women. Multiple data collection techniques, including official data downloads, web<br>scraping, and participatory mapping, were combined for integration, applying specific processing.<br>The datasets refer to four cities: Valencia (Spain), Dublin (Ireland), San Francisco (United States),<br>and Toluca (Mexico).<br>Depending on the availability and context of each city, the datasets are classified into three<br>categories: DATA, TWT, and MAP. The DATA prefix refers to files containing the results of the<br>analysis of socioeconomic variables downloaded from official sources; for the mapping, the<br>standard territorial unit was a 25x25 m grid for Valencia and 50x50 m for Dublin and San Francisco.<br>The files with the prefix TWT are composed of datasets containing tweets collected through web<br>scraping and analyzed using natural language processing (NLP) algorithms and neural networks;<br>the purpose is to identify and classify tweets related to gender violence, feelings of fear, or<br>perceptions of insecurity. For MAP files, participants gathered them through participatory<br>mapping processes, using specific calls to public space users and a supporting web application<br>designed for this purpose. The files with the prefix POL contain datasets used for crime prediction based on crime density for the city of Valencia.</p>
Bicycle Mobility Data: Current Use and Future Potential. An International Survey of Domain Professionals
<p>Active mobility, especially cycling, is an essential building block for sustainable urban mobility. Public and private stakeholders are striving to improve conditions for cycling and subsequently increase its modal share. Data are regarded as key for different measures to become efficient and targeted. There is extensive evidence for an increasing amount of mobility data, availability of new data sources and potential usage scenarios for such data. However, little is known about the current use of these data in policy making, planning and related fields. To the best of our knowledge, it has not been investigated yet to which degree professionals in the broader field of cycling promotion benefit from an increasing amount of cycling-related data. Thus, we conducted a multi-lingual online survey among domain professionals and acquired data on their perspectives on current data availability, use and suitability as well as the potential they see for the use of cycling data in the future. In total, we received 325 complete responses from 32 countries, with the vast majority of 241 valid responses originating from Germany, Austria and Italy. Key findings are: 84% of domain professionals attribute high importance to data, and 89% state that they currently cannot or only partly solve their tasks with the data available to them. Results emphasize the need for making more and better suited data available to professionals in cycling-related positions, in both the private and public sector.</p> <p>Read the full publication: <a href="https://doi.org/10.3390/data6110121">https://doi.org/10.3390/data6110121 </a></p>
Density independent prey choice, taxonomy, life history and web characteristics determine the diet and biocontrol potential of spiders (Linyphiidae and Lycosidae) in cereal crops - Dataset
<p>Materials and Methods</p> <p>Fieldwork</p> <p>Money spiders (Araneae: Linyphiidae) and wolf spiders (Araneae: Lycosidae) were the two most common families present in these field surveys, so were prioritised for collection. Spiders were visually located along transects in two adjacent barley fields at Burdons Farm, Wenvoe in South Wales (51°26'24.8"N, 3°16'17.9"W) and collected from occupied webs and the ground, between April and September 2018. Surveys and sampling were conducted five days per week across this period. Each transect was adjacent to a randomly selected tramline and they were distributed across the entire field. The areas searched were 4 m<sup>2</sup> quadrats at least 10 m apart and all observed linyphiids and lycosids were collected in approximately 15-minute searches. The spiders included in this study were taken from 64 locations across 24 days (Supplementary Table 3) along the aforementioned transects. Spiders were individually placed into 1.5 ml microcentrifuge tubes containing 100 % ethanol using an aspirator, regularly changing meshing, at least every five spiders, to limit potential cross-contamination between spiders (spiders were also subsequently washed during transferral to fresh ethanol at the identification and, separately, dissection stages). Linyphiids occupying webs were prioritised for collection, but ground-active linyphiid spiders were also collected. For each spider taken from a web, the height of the web from the ground and its approximate dimensions were recorded, the latter calculated as approximate web area. Spiders were taken to Cardiff University, transferred to fresh ethanol, adults identified to species-level and juveniles to genus, and stored at -80 °C in 100 % ethanol until subsequent DNA extraction. To obtain data on local prey density, 4 m<sup>2</sup> of ground and crop stems were suction sampled using a ‘G-vac’ for 30 seconds at each quadrat from which spiders were collected, with the collected material emptied into a bag, any organisms immediately killed with ethyl-acetate and material frozen for storage before sorting into 70 % ethanol in the lab.</p> <p>All invertebrates were identified to family level due to the restriction of many of the metabarcoding-derived dietary data to this level, and the difficulty associated with finer taxonomic resolution of many taxa. Exceptions included springtails of the superfamily Sminthuroidea (Sminthuridae and Bourletiellidae, which were often indistinguishable following suction sampling and preservation due to the fine features necessary to distinguish them) which were left at super-family, mites (many of which were immature or in poor condition) which were identified to order level and wasps of the superfamily Ichneumonoidea (which were identified no further due to obscurity of wing venation due to damage).</p> <p> </p> <p>Extraction and high-throughput sequencing of spider gut DNA</p> <p>Given their prevalence in field collections, dietary analysis was carried out for the linyphiid genera <em>Erigone</em>, <em>Tenuiphantes</em>, <em>Bathyphantes</em> and <em>Microlinyphia </em>(Araneae: Linyphiidae), and the Lycosidae genus <em>Pardosa</em>. Spiders were transferred to and washed in fresh 100 % ethanol to reduce external contaminants prior to identification via morphological key <sup>1</sup>. Abdomens were removed from spiders and again washed in and transferred to fresh 100 % ethanol. DNA was extracted from the abdomens via Qiagen TissueLyser II and DNeasy Blood & Tissue Kit (Qiagen) as per the manufacturer protocol, but with an extended lysis time of 12 hours to account for the complex and branched gut system in spider abdomens <sup>2</sup>. At least one extraction negative (blank tubes treated identically to samples) was included per 12 spiders (each extraction typically contained 24 spiders, thus two extraction negatives), which was included in subsequent PCR and high-throughput sequencing to detect instances of lab/reagent contamination.</p> <p>For amplification of DNA, two primer pairs were used. BerenF-LuthienR <sup>3</sup> amplified a broad range of invertebrates including spiders, and TelperionF-LaureR, amplified a range of invertebrates but fewer spiders (modified from TelperionF-LaurelinR <sup>3</sup> via one base-pair change from Laurelin; 5’-ggrtawacwgttcawccagt-3’). Primers were labelled with unique 10 bp molecular identifier tags (MID-tags) so that each individual had a unique pairing of forward and reverse tags for identification of each spider post-sequencing. PCR reactions of 25 µl contained 12.5 µl Qiagen PCR Multiplex kit, 0.2 µmol (2.5 µl of 2 µM) of each primer and 5 µl template DNA. Reactions were carried out in the same thermocycler, optimised via temperature gradient, with an initial 15 minutes at 95 °C, 35 cycles of 95 °C for 30 seconds, the primer-specific annealing temperature for 90 seconds and 72 °C for 90 seconds, respectively, followed by a final extension at 72 °C for 10 minutes. BerenF-LuthienR and TelperionF-LaureR used annealing temperatures of 52 °C and 42 °C, respectively.</p> <p>Within each PCR 96-well plate, 12 negative controls (extraction and PCR), 2 blank controls and 2 positive controls were included (i.e. 80 samples per plate), based on Taberlet <em>et al. </em>(2018). Positive controls were mixtures of invertebrate DNA comprised of non-native Asiatic species in four different proportions (Supplementary Table 1) and blanks were empty wells within each plate to identify tag-jumping into unused MID-tag combinations. PCR negative controls were DNase-free water treated identically to DNA samples. A negative control was present for each MID-tag to identify any contamination of primers. All PCR products were visualised in a 2 % agarose gel with SYBRSafe (Thermo Fisher Scientific, Paisley, UK) and placed in categories based on their relative brightness. The concentration of these brightness categories was quantified via Qubit dsDNA High-sensitivity Assay Kits (Thermo Fisher Scientific, Waltham, MA, USA) with at least three representatives of each category per plate. The PCR products were then proportionally pooled according to these concentrations. Each pool was cleaned via SPRIselect beads (Beckman Coulter, Brea, USA), with a left-side size selection using a 1:1 ratio (retaining ~300-1000 bp fragments). The concentration of the pooled DNA was then determined via Qubit dsDNA High-sensitivity Assay Kits and pooled together into one library per primer pair. Library preparation for Illumina sequencing was carried out on the cleaned libraries via NEXTflex Rapid DNA-Seq Kit (Bioo Scientific, Austin, USA) and samples were sequenced on an Illumina MiSeq via a V3 chip with 300-bp paired-end reads (expected capacity ≤25,000,000 reads). Bioinformatic analysis followed (Drake et al., 2021; Supplementary Information 1).</p> <p> </p> <p>Statistical analysis</p> <p>All analyses were conducted in R v4.0.0 <sup>6</sup>. Initial multivariate analyses used binary data (i.e., presence/absence) given the various problems inherent to quantifying metabarcoding data <sup>7,8</sup>. Prey species that occurred only once across all of the dietary samples were removed before further analyses to prevent outliers skewing the results, which is particularly problematic for non-metric multidimensional scaling. Spider diets were compared between variables using multivariate generalized linear models (MGLMs) via ‘manyglm’ in the ‘mvabund’ package <sup>9</sup> with a binomial error family and Monte Carlo resampling. Model independent variables included spider genus, spider life stage (juvenile or adult, the latter defined by fully developed genitalia), spider sex and all two-way interactions between these variables. Pairwise two-way interactions were also included between the aforementioned variables and Julian day to account for how seasonality may affect these relationships.</p> <p>Coarse dietary differences were visualised by non-metric multidimensional scaling (NMDS) via metaMDS in the ‘vegan’ package <sup>10</sup> with Jaccard distance in two dimensions and 999 tries. For NMDS, outliers (usually samples containing rare taxa) were identified by plotting and subsequently removed to facilitate separation of samples and achieve minimum stress. For visualisation of the effect of categorical variables against the dietary NMDS, spider plots were created using ‘ordispider’ with ‘ggplot’ and the ‘RColorBrewer’ ‘Accent’ colour palette <sup>11</sup>. Spider diet was compared against web characteristics for spiders for which both data were available using the MGLM process outlined above, but with starting models containing web height, web area, an interaction between the two, and pairwise interactions between genus, life stage and sex with the two web variables. This model used the same binomial error family as above, but with a ‘cloglog’ link function. For visualisation of the effect of continuous variables against the NMDS, surf plots were created with scaled coloured contours using the function “ordisurf” of the “ggplot” package in R.</p> <p>All prey taxa were classified as agricultural pests, natural enemies or excluded from subsequent analyses of intraguild predation and biocontrol (Supplementary Table 2). Intraguild predation and biocontrol variables were created by counting the number of natural enemy taxa, and, separately, of agriculturally relevant “pest” taxa (taxa containing species that commonly adversely affect agricultural productivity; Supplementary Table 2) in each spider’s diet. These resultant count data (effectively the diversity of pests and natural enemies predated by each individual spider) were separately analysed against spider genus, life stage and sex via GLM. “Site” (denoting the 4 m<sup>2</sup> area from which spiders were collected within fields) was initially included as a random effect in generalized linear mixed-models, but no significant effect was observed when comparing this model against a standard GLM via a likelihood ratio test of nested models using the ‘lrtest’ command in the ‘lmtest’ package <sup>12</sup>. Standard GLMs were thus used to avoid issues relating to singularity in the mixed models. The assumptions for the resultant Poisson error family GLMs were tested using the “testResiduals” function of the ‘DHARMa’ package <sup>13</sup>. Intraguild predation and biocontrol differences between significant terms were visualised using violin plots with the quartiles, median and 95 % upper limit annotated using the ‘geom_violin’ function in ‘ggplot2’.</p> <p><em>In situ</em> spider prey choice was analysed using network-based null models in the ‘econullnetr’ package <sup>14</sup> with the ‘generate_null_net’ command, visually represented with the ‘plot_preferences’ command. Binary dietary data were used alongside suction sample count data to represent prey availability. These suction sample data, as described above, were collected at the same sites as the spiders three days after spider collection. Prior to the taxonomic prey choice analysis, an hemipteran identified no further than order level through dietary analysis was removed due to the inability to pair it to any present prey taxa with certainty. Standardised effect sizes (SES) were extracted for all comparisons for each individual spider and compared between genera, life stages and sexes using permutational multivariate analysis of variance (PerMANOVA) using the ‘adonis’ function of the ’vegan’ package with 9999 permutations and a Euclidean distance matrix to determine overall differences in prey choice.</p> <p> </p> <p>References</p> <p>1. Roberts, M. J. <em>The Spiders of Great Britain and Ireland (Compact Edition)</em>. (Harley Books, 1993).</p> <p>2. Krehenwinkel, H., Kennedy, S., Pekár, S. & Gillespie, R. G. A cost-efficient and simple protocol to enrich prey DNA from extractions of predatory arthropods for large-scale gut content analysis by Illumina sequencing. <em>Methods Ecol. Evol.</em> <strong>8</strong>, 126–134 (2017).</p> <p>3. Cuff, J. P. <em>et al.</em> Money spider dietary choice in pre- and post-harvest cereal crops using metabarcoding. <em>Ecol. Entomol.</em> <strong>46</strong>, 249–261 (2021).</p> <p>4. Taberlet, P., Bonin, A., Zinger, L. & Coissac, E. <em>Environmental DNA</em>. (Oxford University Press, 2018).</p> <p>5. Drake, L. E. <em>et al.</em> An assessment of minimum sequence copy thresholds for identifying and reducing the prevalence of artefacts in dietary metabarcoding data. <em>Methods Ecol. Evol.</em> <strong>in press</strong>, (2021).</p> <p>6. R Core Team. R: A language and environment for statistical computing. (2020).</p> <p>7. Deagle, B. E., Thomas, A. C., Shaffer, A. K. & Trites, A. W. Quantifying sequence proportions in a DNA-based diet study using Ion Torrent amplicon sequencing: which counts count? <em>Mol. Ecol. Resour.</em> <strong>13</strong>, 620–633 (2013).</p> <p>8. Deagle, B. E. <em>et al.</em> Counting with DNA in metabarcoding studies: How should we convert sequence reads to dietary data? <em>Mol. Ecol.</em> <strong>28</strong>, 391–406 (2019).</p> <p>9. Wang, Y., Naumann, U., Wright, S. T. & Warton, D. I. mvabund – an R package for model-based analysis of multivariate abundance data. <em>Methods Ecol. Evol.</em> <strong>3</strong>, 471–474 (2012).</p> <p>10. Oksanen, J. <em>et al.</em> vegan: Community Ecology Package. (2016).</p> <p>11. Neuwirth, E. RColorBrewer: ColorBrewer palettes. (2014).</p> <p>12. Zeileis, A. & Hothorn, T. Diagnostic checking in regression relationships. <em>R News</em> <strong>2</strong>, 7–10 (2002).</p> <p>13. Hartig, F. DHARMa: residual diagnostics for hierarchical (multi-level/mixed) regression models. (2020).</p> <p>14. Vaughan, I. P. <em>et al.</em> econullnetr: an r package using null models to analyse the structure of ecological networks and identify resource selection. <em>Methods Ecol. Evol.</em> <strong>9</strong>, 728–733 (2018).</p>
Supplementary data: Accurate large-scale simulations of siliceous zeolites by neural network potentials
<p><strong>Content</strong></p> <p><em>1. Zeolite databases</em></p> <ul> <li>Deem database containing 331170 hypothetical zeolite frameworks [Deem09, Pophale11] geometrically optimized at the NNPscan level (note, the first row of the database is alpha-quartz): "DEEM_NNPscan.db"</li> <li>Database of 236 exiting zeolite frameworks of the <a href="http://www.iza-structure.org/databases/">International Zeolite Association (IZA) </a>optimized at the NNPscan level: "IZA_NNPscan.db"</li> <li>Both databases are <a href="https://wiki.fysik.dtu.dk/ase/ase/db/db.html">ASE SQLite database files</a> of the <a href="https://wiki.fysik.dtu.dk/ase/index.html">Atomic Simulation Environment</a> containing the ASE <a href="https://wiki.fysik.dtu.dk/ase/ase/atoms.html">Atoms objects</a> with energies and forces (NNPscan level); readable with ASE's <a href="https://wiki.fysik.dtu.dk/ase/ase/io/io.html">I/O module</a></li> <li>Additionally, relevant quantities can be extracted with, e.g., the following queries (further information: ase db --help):</li> </ul> <pre><code class="language-bash">ase db DEEM_NNPscan.db -c id,formula,natoms,volume,mass,density,energy_per_tsite,n_tsites,relative_energy # Output id|formula|natoms| volume| mass|density|energy_per_tsite|n_tsites|relative_energy 1|O6Si3 | 9|111.161|180.249| 26.988| -31.796| 3| 0.000 2|O16Si8 | 24|433.858|480.664| 18.439| -31.638| 8| 15.265 3|O16Si8 | 24|421.114|480.664| 18.997| -31.596| 8| 19.359 4|O16Si8 | 24|426.557|480.664| 18.755| -31.614| 8| 17.613 5|O16Si8 | 24|412.410|480.664| 19.398| -31.613| 8| 17.677 6|O16Si8 | 24|393.544|480.664| 20.328| -31.594| 8| 19.546 7|O16Si8 | 24|422.400|480.664| 18.939| -31.657| 8| 13.476 8|O16Si8 | 24|394.405|480.664| 20.284| -31.581| 8| 20.797 9|O12Si6 | 18|265.201|360.498| 22.624| -31.611| 6| 17.868 10|O16Si8 | 24|357.047|480.664| 22.406| -31.581| 8| 20.785 11|O16Si8 | 24|434.894|480.664| 18.395| -31.621| 8| 16.911 12|O16Si8 | 24|384.158|480.664| 20.825| -31.657| 8| 13.448 13|O12Si6 | 18|258.977|360.498| 23.168| -31.679| 6| 11.278 14|O16Si8 | 24|466.429|480.664| 17.152| -31.593| 8| 19.588 15|O16Si8 | 24|423.469|480.664| 18.892| -31.639| 8| 15.179 16|O16Si8 | 24|450.716|480.664| 17.750| -31.628| 8| 16.219 17|O16Si8 | 24|331.528|480.664| 24.131| -31.642| 8| 14.857 18|O16Si8 | 24|458.573|480.664| 17.445| -31.635| 8| 15.572 19|O16Si8 | 24|359.298|480.664| 22.266| -31.655| 8| 13.636 20|O16Si8 | 24|464.264|480.664| 17.232| -31.612| 8| 17.750 Rows: 331171 (showing first 20) Keys: density, energy_per_tsite, n_tsites, relative_energy ase db IZA_NNPscan.db -c id,formula,natoms,volume,mass,density,energy_per_tsite,n_tsites,relative_energy,iza_code # Output id|formula |natoms| volume| mass|density|energy_per_tsite|n_tsites|relative_energy|iza_code 1|O16Si8 | 24| 435.488| 480.664| 18.370| -31.676| 8| 11.594|ABW 2|O32Si16 | 48| 961.419| 961.328| 16.642| -31.645| 16| 14.612|ACO 3|O96Si48 | 144|3154.579|2883.984| 15.216| -31.664| 48| 12.810|AEI 4|O80Si40 | 120|2102.921|2403.320| 19.021| -31.703| 40| 9.021|AEL 5|O96Si48 | 144|2417.286|2883.984| 19.857| -31.666| 48| 12.586|AEN 6|O144Si72| 216|4075.300|4325.976| 17.667| -31.674| 72| 11.831|AET 7|O96Si48 | 144|2786.810|2883.984| 17.224| -31.675| 48| 11.716|AFG 8|O48Si24 | 72|1400.247|1441.992| 17.140| -31.690| 24| 10.268|AFI 9|O64Si32 | 96|1764.823|1922.656| 18.132| -31.653| 32| 13.809|AFN 10|O80Si40 | 120|2080.330|2403.320| 19.228| -31.707| 40| 8.632|AFO 11|O64Si32 | 96|2097.384|1922.656| 15.257| -31.655| 32| 13.622|AFR 12|O112Si56| 168|3820.116|3364.648| 14.659| -31.650| 56| 14.150|AFS 13|O144Si72| 216|4732.720|4325.976| 15.213| -31.664| 72| 12.793|AFT 14|O60Si30 | 90|1897.074|1802.490| 15.814| -31.659| 30| 13.268|AFV 15|O96Si48 | 144|3154.885|2883.984| 15.214| -31.664| 48| 12.776|AFX 16|O32Si16 | 48|1137.335| 961.328| 14.068| -31.591| 16| 19.790|AFY 17|O48Si24 | 72|1283.812|1441.992| 18.694| -31.620| 24| 17.034|AHT 18|O96Si48 | 144|2479.287|2883.984| 19.360| -31.681| 48| 11.155|ANA 19|O64Si32 | 96|1797.086|1922.656| 17.807| -31.662| 32| 12.924|APC 20|O64Si32 | 96|1751.393|1922.656| 18.271| -31.678| 32| 11.422|APD Rows: 236 (showing first 20) Keys: density, energy_per_tsite, iza_code, n_tsites, relative_energy # Filtering of the database, e.g., for structures with relative energies < 10 kJ/(mol Si) ase db IZA_NNPscan.db relative_energy\<10 -c density,energy_per_tsite,n_tsites,relative_energy,iza_code # Output density|energy_per_tsite|n_tsites|relative_energy|iza_code 19.021| -31.703| 40| 9.021|AEL 19.228| -31.707| 40| 8.632|AFO 19.385| -31.695| 24| 9.802|ATV 18.778| -31.702| 34| 9.061|DOH 19.570| -31.693| 24| 9.959|EWO 18.401| -31.698| 32| 9.451|GON 18.551| -31.695| 112| 9.807|IHW 17.778| -31.693| 288| 9.972|IMF 19.154| -31.695| 6| 9.762|JBW 18.187| -31.695| 96| 9.734|MFI 19.278| -31.709| 48| 8.443|MRE 18.035| -31.698| 90| 9.481|MSO 20.417| -31.724| 44| 7.003|MTF 19.227| -31.704| 136| 8.898|MTN 18.542| -31.693| 28| 9.966|MTW 19.137| -31.695| 60| 9.798|PCR 20.037| -31.709| 144| 8.464|PSI 18.843| -31.703| 64| 9.004|SAF 18.371| -31.703| 112| 8.975|STO 19.894| -31.706| 17| 8.671|VET Rows: 20 (showing first 20) Keys: density, energy_per_tsite, iza_code, n_tsites, relative_energy</code></pre> <ul> <li>The quantities shown above are available with the keys (besides standard ASE database keys):</li> </ul> <table> <thead> <tr> <th scope="col">Key</th> <th scope="col">Quantity</th> <th scope="col">Unit</th> </tr> </thead> <tbody> <tr> <td>id</td> <td>Identifier</td> <td> </td> </tr> <tr> <td>formula</td> <td>Chemical formula of the unit cell</td> <td> </td> </tr> <tr> <td>natoms</td> <td>Number of atoms</td> <td> </td> </tr> <tr> <td>volume</td> <td>Unti cell volume</td> <td>Å<sup>3</sup></td> </tr> <tr> <td>mass</td> <td>Atomic mass of the unit cell</td> <td>amu</td> </tr> <tr> <td>density</td> <td>Framework density</td> <td>Si/nm<sup>3</sup></td> </tr> <tr> <td>energy_per_tsite</td> <td>NNPscan energy</td> <td>eV</td> </tr> <tr> <td>n_tsites</td> <td>Number of T-sites</td> <td> </td> </tr> <tr> <td>relative_energy</td> <td>Energy with respect to quartz</td> <td>kJ/(mol Si)</td> </tr> <tr> <td>iza_code</td> <td>only for 'IZA_NNPscan.db'</td> <td> </td> </tr> </tbody> </table> <ul> <li> Comma separated csv files for the quantities listed above: "DEEM_NNPscan.csv" and "IZA_NNPscan.csv"</li> </ul> <p><em>2. Neural network potentials (NNP) for silica</em></p> <ul> <li>SchNet [Schütt18,Schütt19] NNP files trained on DFT data at the PBE+D3 (NNPpbe) and SCAN+D3 level (NNPscan)</li> <li>Simulations can be performed using <a href="https://schnetpack.readthedocs.io/en/stable/getstarted/getstarted.html#references">SchNetPack</a> with its ASE calculator</li> <li>This example shows a simple single-point calculation</li> </ul> <pre><code class="language-python">import ase.io import torch from schnetpack.interfaces import SpkCalculator from schnetpack.environment import AseEnvironmentProvider # check if GPU(s) are available if torch.cuda.is_available(): device = "cuda" else: device = "cpu" # load the NNP model model = torch.load('SiOscan1', map_location=device) # read some structure atoms = ase.io.read( ... ) # define SchNetPack calculator calc = SpkCalculator(model=model, device=device, energy='energy', forces='forces', environment_provider=AseEnvironmentProvider(6.) ) # attach calculator to atoms object atoms.set_calculator(calc) # perform simulations, e.g., single-point calculation energy = atoms.get_potential_energy() print(energy)</code></pre> <p><em>3. Test set used for accuracy evaluation (ASE database: test_set_NNPscan.db)</em></p>
Scenarios of technical and useful ground-source heat pump potential for building heating and cooling in Western Switzerland
<p>This dataset contains an estimation of the useful and technical potential of shallow ground-source heat pumps (GSHPs) for Western Switzerland, at a spatial resolution of 400 x 400 m<sup>2</sup>. The <strong>technical potential</strong> is hereby defined as the maximum energy that could be extracted from GSHP systems in case of their dense deployment, such as to <em>avoid the over-exploitation</em> of the heat capacity of the ground. We consider GSHPs with <em>vertical closed-loop borehole heat exchangers</em> (BHE) installed at depths of 50 - 200 m. The <strong>useful potential</strong> is defined as the potential that could be delivered to building heating and cooling systems via a water-to-water heat pump.</p> <p>The datasets contains future scenarios of heating and cooling demand, space cooling equipment deployment (service sector only) and climate change models and considers the potential use of DHC. The dataset covers around 80,000 property units (parcels) in the Swiss Cantons of Vaud and Geneva, excluding only the areas of the Alps and the Jura mountains.</p> <p>The data package contains information on the available area for GSHP systems, the heating and cooling demand as well as the resulting technical and useful potentials for all simulated scenarios of future cooling demand (200 Monte Carlo runs), for the case of <strong>direct heat supply</strong> (per pixel of 400 x 400 m<sup>2</sup>) as well as for <strong>district heating and cooling</strong> (DHC). In scenarios without DHC (direct heat supply), the results are summarized by pixel of 400 x 400 m<sup>2</sup>. In scenarios with DHC, the results of potentials <em>within</em> DHCs are summarized by DHC (see <em>*_in_dhc.csv</em>) while potentials <em>outside</em> of DHCs are summarized by pixel (see <em>*_outside_dhc.csv</em>).</p> <p>For details on the methodology applied to obtain the results provided in the data package, please refer to the above-mentioned research articles. A description of all files is provided in<em> Dataset documentation.pdf</em> and metadata is provided in <em>Datapackage.json.</em></p>
MCMC chain of Milky Way gravitational potential models from McMillan (2017, MNRAS, 465, 76)
<p>These are the full MCMC chains used for the main suite of results from McMillan (2017, MNRAS, 465, 76). Each line gives the parameters of a single model, with some of its derived properties, and an associated weight (the number of steps that the chain stayed at this model). The parameters are described in the README file, and further detail can be found in the original paper.</p> <p>The disc density profiles are of the form</p> <p><span class="math-tex">\(\begin{equation} \rho_d(R,z)=\left\{\begin{array}{lc}\frac{\Sigma(R)}{2z_d}\,\textrm{exp}\left(\frac{-\mid z\mid}{z_d}\right) & \textrm{for }z_d > 0 \\ \frac{\Sigma(R)}{4(-z_d)}\,\textrm{sech}^2\left(\frac{z}{2\,z_d}\right) & \textrm{for } z_d < 0,\\\end{array}\right. \end{equation}\)</span></p> <p>where</p> <p><span class="math-tex">\(\begin{equation} \Sigma(R)=\Sigma_0\;\textrm{exp}\left(-\frac{R_0}{R}-\frac{R}{R_d}+ \epsilon\textrm{cos}\left(\frac{\pi R}{R_d}\right)\right), \end{equation} \)</span></p> <p>with parameters <span class="math-tex">\(\Sigma_0, R_d, z_d, R_0, \epsilon\)</span> (note that <span class="math-tex">\(R_0\)</span> here is not the position of the Sun, and that <span class="math-tex">\(\epsilon\)</span> is not used).</p> <p>Spheroids have </p> <p><span class="math-tex">\(\begin{equation} \rho_s=\frac{\rho_0}{(r^\prime/r_0)^\gamma(1+r^\prime/r_0)^{\beta-\gamma}}\; \textrm{exp}\left[-\left(r^\prime/r_{cut}\right)^2\right], \end{equation} \)</span></p> <p>where</p> <p><span class="math-tex">\(\begin{equation} r^\prime = \sqrt{R^2 + (z/q)^2} \end{equation} \)</span></p> <p>with parameters <span class="math-tex">\( \rho_0, q, \gamma, \beta, r_0, r_{cut}\)</span> (note that <span class="math-tex">\(r_0\)</span> is different again)</p>
Dataset and framework for the Open Potential Ecological Network of Tuscany
<p>This repository contains the main output of the related research, specifically: two Open Potential Ecological Networks (OPEN) of Tuscany in the Cytoscape format: "tuscany_potential_directed.cys" and "tuscany_potential_undirected.cys".</p> <p>Please see the "annotations.txt" file to more detailed explanation regarding the content in this repository.</p>
The potential of low-cost UAVs and open-source photogrammetry software for high-resolution monitoring of alpine glaciers: A case study from the Kanderfirn (Swiss Alps)
<p>This dataset contains high-resolution orthophotos (5 x 5 cm) and digital surface models (25 x 25 cm) of the Kandernfirn Glacier located in the Swiss Alps. Aerial images were aquired with a self-developed fixed-wing Unmanned Aerial Vehicle during ten surveys on five different days in 2017 and 2018. The open-source photogrammetry software OpenDroneMap (version 0.4.1) was used for image processing.</p> <p>The orthophotos and digital surface models were validated through dGNSS point measurements of ground control points. Please refer to the corresponding paper for information on the horizontal and vertical accuracy of the files.</p>
Potential Tree Species Richness in the Forests of New Caledonia
<h1>Description</h1> <p>This dataset aims to represent, in geographic space, the potential distribution of biological tree richness in New Caledonian forests according to a 1 ha grid based on the observed distribution of 148,085 occurrences for 1112 tree species.</p> <p>For each species, we constructed the environmental niche based on 7 abiotic variables (rainfall, slope, elevation, compound topographic index, substrate, sunshine index, distance to the east coast; cf. Pouteau et al., 2015, 2019 for details). We used species distribution models (SDM) and stacked species distribution models (S-SDM) through the R-package SSDM (Schmitt et al., 2017).</p> <p>According to the S-SDM model, the potential richness ranges between 18 and 355 tree species per hectare in New Caledonia. We adjusted this range to the richness observed on 24 1 ha plots from the Permanent Plant Inventory Network of New Caledonia (NC-PIPPN), which ranges between 35 and 121 tree species per hectare. Finally, we clipped the resulting raster with the forest map of New Caledonia (version 2024, Birnbaum et al., 2024) to produce the raster of potential distribution of biological tree richness in the New Caledonian forests at 1 ha resolution.</p> <h1>Content</h1> <p>This dataset was produced, analyzed, and verified using a combination of open-source software, including QGIS, PostgreSQL, PostGIS, Python, R, and the GDAL library, all running on Linux.</p> <ul> <li>amap_raster_forest_richness.tif is a GeoTIFF utilizing the WGS84 international coordinate system and consists of a single band with graduated values ranging from 35 to 121 potential tree species per hectare. The NoData value was set to 0.</li> <li>amap_raster_forest_richness.png is a image illustrating the spatial distribution of the data and values</li> </ul> <h1>Limitations</h1> <p>This dataset is strictly based on the relationship between a few environmental variables and a limited set of tree species occurrences. While it provides a valuable overview of potential tree species richness, it represents only a part of the complex biotic and abiotic interactions that lead to the effective presence or absence of a species in the environment. Consequently, the projection of these probabilities onto the geographical space provides only an overview of the potential richness of forest fragments, which should not be considered as the observed diversity.</p> <p>Additionally, due to a lack of occurrence data, only the Grande-Terre forest is covered in this raster.</p>
Dataset of Norwegian forest albedo carbon offset potential
<p>This dataset contains the following six files in geotiff format with additional user detail provided as a README.txt file: 1) Forest albedo effect in C-equivalent units for the present day climate 2) Forest albedo effect in C-equivalent units for the transient 21st century RCP4.5 climate 3) Forest albedo's carbon offset potential for the present day climate 4) Forest albedo's carbon offset potential for the transient 21st century RCP4.5 climate 5) Site Index (productivity class) of dominant tree species 6) Dominant tree species 7) README</p> <p>The dataset contains results and input data related the following publication: <br>Bright, R. M., Cataneo, N., Antón-Fernández, C., Eisner, S., Astrup, R., "Relevance of surface albedo to forestry policy in high latitude and altitude regions may be overvalued". <em>Environmental Research Letters, <span><a href="https://doi.org/10.1088/1748-9326/ad657e">https://doi.org/10.1088/1748-9326/ad657e</a></span></em> </p>
Exemple of a valorization network based on a 10% collection rate from potential biowaste in the Grand Lyon territory (France).
<p>This study, conducted in the frame of the H2020 DECISIVE project, aims at developing a method to design a decentralized and small-scale AD (mAD) network in urban and peri-urban areas. A mixed integer linear program (MILP) was set up based on the proposed system. It aims at minimizing the impacts of the biowaste and the digestate transportation by minimizing their payload-distances while taking into account notably the technical constraints of the newly developed micro-AD. A Geographic Information System (GIS) based methodology was developed to feed the MILP model with very fine-scale data required to optimized a proximity treatment system. The method allows to locate and estimate the biowaste generation and to locate the digestate outlets, the agricultural areas, and to estimate the maximal amount of digestate usable. The candidate sites for mAD are identified with a GIS multi-criteria analysis that includes the environmental regulations, some urban planning rules and the site accessibility and heat outlet valorization. The method developed is successfully applied in the territory of The Grand Lyon Metropole (534 km²), located in France. The MILP model succeeds at providing a solution even with the very large problem studied (≥10<sup>8</sup> possible combination). Different scenarios can be easily tested to meet the potential needs of the stakeholder: the quantity of biowaste to treat, the type of sources to target, the synergy with the current treatment solution, etc.</p> <p>The data are provided through the open, non-proprietary GeoPackage files (GPKG) commonly recognized in GIS tools. A complementary xml file describe the metadata in compliance with the Inspire directive. A complementary pdf file describe the fields of the datasets.</p> <p> </p>
Data from: Spatial distribution of the potential forest biomass availability in Europe
<p>European forests are considered a crucial resource for supplying biomass to a growing bio-economy in Europe. This study aimed to assess the potential availability of forest biomass from European forests and its spatial distribution. We tried to answer the questions (i) how is the potential forest biomass availability spatially distributed across Europe and (ii) where are hotspots of potential forest biomass availability located?</p> <p>The spatial distribution of woody biomass potentials was assessed for 2020 for stemwood, residues (branches and harvest losses) and stumps for 39 European countries. Using the European Forest Information SCENario (EFISCEN) model and international forest statistics, we estimated the theoretical amount of biomass that could be available based on the current and future development of the forest age-structure, growing stock and increment and forest management regimes. We combined these estimates with a set of environmental (site productivity, soil and water protection and biodiversity protection) and technical (recovery rate, soil bearing capacity) constraints, which reduced the amount of woody biomass that could potentially be available. We mapped the potential biomass availability at the level of administrative units and at the 10 km × 10 km grid level to gain insight into the spatial distribution of the woody biomass potentials.</p> <p>According to our results, the total availability of forest biomass ranges between 357 and 551 Tg dry matter per year. The largest potential supply of woody biomass per unit of land can be found in northern Europe (southern Finland and Sweden, Estonia and Latvia), central Europe (Austria, Czech Republic, and southern Germany), Slovenia, southwest France and Portugal. However, large parts of these potentials are already used to produce materials and energy. The distribution of biomass potentials that are currently unused only partially coincides with regions that currently have high levels of wood production.</p> <p>Our study shows how the forest biomass potentials are spatially distributed across the European continent, thereby providing insight into where policies could focus on an increase of the supply of woody biomass from forests. Future research on potential biomass availability from European forests should also consider to what extent forest owners would be willing to mobilise additional biomass from their forests and at what costs the estimated potentials could be mobilised.</p> <p>This dataset contains the data of the map presented in Figure 2A: Estimated spatial distribution of forest biomass availability according to the BASE potential (ton dry matter ha-1 land yr-1) at the grid (10x10 km) level.</p>
Potential of the three-terminal heterojunction bipolar transistor solar cell for space applications
<p>In this video we repeat the presentation we gave at the European Space Power Conference (2019), in JeanLes Pins, describing the potential of the three-terminal heterojunction bipolar transistor solar cell for space applications. There is a paper published in the proceedings of the Conference were you can find more details.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.