Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
118
datasets available to search
ShareScore release 0.9.0
Dataset results
118 results for “recircumscription”
Appendix 2 in Confirmed polyphyly, generic recircumscription and typification of Dysoxylum (Meliaceae), with revised disposition of currently accepted species
<p><b>Appendix 2.</b> Nucleotide substitution models used in the BI analyses for each marker in the alignment without and with applying Gblocks (Castresana, 2000).</p><table><tbody><tr><th></th><th>Nucleotide substitution model for alignment without Gblocks</th><th>Nucleotide substitution model for alignment using Gblocks</th></tr></tbody><tbody><tr><th>ITS</th><td>GTR+I+Γ (Tavaré, 1986)</td><td>GTR+I+Γ (Tavaré, 1986)</td></tr><tr><th>ETS</th><td>TVM+Γ (Posada, 2003)</td><td>TVM+Γ (Posada, 2003)</td></tr><tr><th><i>trnL-F</i></th><td>TVM+Γ (Posada, 2003)</td><td>HKY (Hasegawa & al., 1985)</td></tr><tr><th><i>rps15-ycf1</i> HKY+Γ (Hasegawa & al., 1985)</th><td>—*</td></tr></tbody></table>
Supplementary material 1 from: Shepherd KA, Lepschi BJ, Johnson EA, Gardner AG, Sessa EB, S. Jabaily R (2020) The concluding chapter: recircumscription of Goodenia (Goodeniaceae) to include four allied genera with an updated infrageneric classification. PhytoKeys 152: 27-104. https://doi.org/10.3897/phytokeys.152.49604
Summary of GenBank accession numbers, Taxon names, Project numbers, Herbarium Accession numbers, voucher collectors and collection numbers, phylogenetic position and taxonomy and classification according to Shepherd et al.
FIGURE 3 in Recircumscription of the genera Goniozus and Sierola (Hymenoptera: Bethylidae) based on morphological and molecular evidence
FIGURE 3. One of the most-parsimonious trees showing branch lengths, with all terminals labelled. Labels include genus or morphogroup (e.g. Sierola open cell, Goniozus s.s., "Parasierola"), species if known, country of origin, BOLD process ID, and GenBank number if applicable.
FIGURE 1. Fore wing venation. A in Recircumscription of the genera Goniozus and Sierola (Hymenoptera: Bethylidae) based on morphological and molecular evidence
FIGURE 1. Fore wing venation. A) Goniozus sensu stricto: G. williamsi (reversed image of left wing). B) "Parasierola": G. emigratus. C) Typical Sierola: S. oahuensis. D) Australian Sierola with cell 2R1 open: undescribed, BOLD process ID AUSMA313-14.
FIGURE 4 in Recircumscription of the genera Goniozus and Sierola (Hymenoptera: Bethylidae) based on morphological and molecular evidence
FIGURE 4. Consensus parsimony tree from PAUP*. Bootstrap values>50 are below branches. Within Sierola, light orange indicates taxa with cell 2R1 open; the group marked "non-Australian Sierola" includes one New Guinea, one New Zealand, and four Australian taxa. Within Goniozus, dark blue branches are "Parasierola" and light pink are Goniozus s.s. The lower group of Goniozus noted as having palpal formula 4:2 probably includes the entire surrounding clade of Goniozus s.s., but only one definite species name could be associated here.
FIGURE 2 in Recircumscription of the genera Goniozus and Sierola (Hymenoptera: Bethylidae) based on morphological and molecular evidence
FIGURE 2. Comparison of insertions and deletions in bethyline genera. Codons are numbered at the top by position 3' from primer LepF1 and colored by amino acid translation. Country and region abbreviations: Aus = Australia, Ban = Bangladesh, Can = Canada, CR = Costa Rica, Egy = Egypt, Haw = Hawaii, Ind = India, Mad = Madagascar, Mal = Malaysia, NZ = New Zealand, SAf = South Africa.
Supplementary material 2 from: Pellegrini MOO, Horn CN, Almeida RF (2018) Total evidence phylogeny of Pontederiaceae (Commelinales) sheds light on the necessity of its recircumscription and synopsis of Pontederia L. PhytoKeys 108: 25-83. https://doi.org/10.3897/phytokeys.108.27652
Morphological matrix : Explanation note: Matrix with the 27 terminals and the first 96 characters. The characters that were not coded due to lack of data of the analyzed specimens and/or from literatures sources are coded as "?"; characters that did not apply were coded as "-"; and the polymorphic characters were coded with a "/" between each state it presented.
Supplementary material 1 from: Pellegrini MOO, Horn CN, Almeida RF (2018) Total evidence phylogeny of Pontederiaceae (Commelinales) sheds light on the necessity of its recircumscription and synopsis of Pontederia L. PhytoKeys 108: 25-83. https://doi.org/10.3897/phytokeys.108.27652
List of morphological characters and coding : Explanation note: List of morphological characters and their respective coding, used in the morphological and total evidence analyses.
FIGURE 4. Begonia humillima L.B in A revision and recircumscription of Begonia Section Pilderia including one new species
FIGURE 4. Begonia humillima L.B.Sm. & Wassh. A. Habit; B. Male flower (front view); C. Female flower (side view); D. Fruit (sidetop view, dissected); E. Androecium (side view) F. Group of styles and stigmas (side view). Reproduced from (Smith & Wasshausen 1983) with the permission of Phytologia.
FIGURE 6. Begonia tepuiensis Moonlight & Jara. A in A revision and recircumscription of Begonia Section Pilderia including one new species
FIGURE 6. Begonia tepuiensis Moonlight & Jara. A. Habit, flowering top; B. Habit, shoot with rooting nodes; C. Female flower (side view); D. Stigma (front view); E. Stigma (back view); F. Bract; G. Detail of leaf hairs, upper lamina; H. Detail of leaf hairs, lower lamina. Drawn from type collection R.S. Cowen & J.J. Wurdack 31443 by Claire Banks.
FIGURE 2. Begonia buddleiifolia A in A revision and recircumscription of Begonia Section Pilderia including one new species
FIGURE 2. Begonia buddleiifolia A.DC. A. Habit; B. Male flower (front view); C. Female flower (side view); D. Group of three styles and stigmas; E. Seeds. Reproduced from (Smith & Wasshausen 1986) with the permission of The Flora of Ecuador.
FIGURE 1. 50 in A revision and recircumscription of Begonia Section Pilderia including one new species
FIGURE 1. 50% majority rule consensus tree of MrBayes analysis of Neotropical Clade 2 (NC2) of Begonia. Asterisks indicate posterior clade probabilities <0.85.
FIGURE 3. Begonia glandulifera Griseb. A in A revision and recircumscription of Begonia Section Pilderia including one new species
FIGURE 3. Begonia glandulifera Griseb. A. Habit; B. Branch of inflorescence (scale bar A–B: 10cm); C. Leaf, upperside; D. Leaf, underside (scale bar C–D: 5cm); E. Male flower, front view; F. Male flower, side view; G. Female flower, side view; H. Female flower, back view; I. Female flower, front view (scale bar E–I: 1cm); Photographs taken at the Royal Botanic Garden Edinburgh by Peter W. Moonlight (Accession Number: 20030500, Collected in Trinidad & Tobago, Gardner & Knees 6011).
FIGURE 5. Begonia mariannensis Wassh. & T. McClellan. A in A revision and recircumscription of Begonia Section Pilderia including one new species
FIGURE 5. Begonia mariannensis Wassh. & T. McClellan. A. Habit; B. Male flower (front view); C. Female flower and branch of inflorescence (side view); D. Female flower (side view); E. Group of styles and stigmas (side view); F. Seeds. Reproduced from (Wasshausen & McClellan 1995) with the permission of Brittonia.
FIGURE 7 in A revision and recircumscription of Begonia Section Pilderia including one new species
FIGURE 7. Distributions of species in Begonia sect. Pilderia (Klotzsch) A.DC. A. B. buddleiifolia A.DC.; B. B. glandulifera Griseb.; C. B. humillima L.B.Sm. & Wassh.; D. B. jenmanii Tutin; E. B. mariannensis Wassh. & T.McClellan; F. B. tepuiensis Moonlight & Jara.
FIGURE 4 in Reestablishment and recircumscription of Paepalanthus elatus (Eriocaulaceae, Poales), a threatened micro-endemic species from northern Serra do Cipó, Minas Gerais, Brazil
FIGURE 4. Comparison between Paepalanthus argenteus var. elatus (at right) and its neighboring population of P. argenteus var. argenteus (at left). A. Habit. B–F. Leaf: length (B), adaxial base (C), adaxial middle (D), abaxial apex (E), adaxial apex (F). G–H. Spathe: apex (G) and length (H). I–N. Capitulum: upper view (I), lateral view (J), early (K) to mature (N) development. (Photos: Wellerson Picanço)
FIGURE 3. Paepalanthus argenteus var. elatus. A, B. Habitat. C. Habit. D in Reestablishment and recircumscription of Paepalanthus elatus (Eriocaulaceae, Poales), a threatened micro-endemic species from northern Serra do Cipó, Minas Gerais, Brazil
FIGURE 3. Paepalanthus argenteus var. elatus. A, B. Habitat. C. Habit. D. Mature individual, showing inflorescences at various stages of development. E. Longitudinal section of the stem and leaf rosette, showing the yellowish caudex with marcescent leaf sheaths. F. Leaves, showing the striated indumentum on the abaxial surface and green appearance adaxially, and green scapes. G. Leaf abaxial surface, showing patent hairs and acuminate apex. H–K. Capitula in various developmental stages, from bud (H) to fruiting (K), all with long reflexed, acuminate involucral bracts; remarkable details are the capitula with staminate (I, at right, and K) and pistillate (I at left) flowers at anthesis, and the Diptera and Coleoptera flower visitors (J). (Photos: Livia Echternacht)
FIGURE 1 in Reestablishment and recircumscription of Paepalanthus elatus (Eriocaulaceae, Poales), a threatened micro-endemic species from northern Serra do Cipó, Minas Gerais, Brazil
FIGURE 1. Distribution map of Paepalanthus argenteus in the Espinhaço Range, Minas Gerais, Brazil. Map I. Paepalanthus argenteus var. argenteus studied vouchers. Map II. Area of occupancy of the only known population of P. argenteus var. elatus and the closest population of P. argenteus var. argenteus, Fechados district, Santana de Pirapama municipality.
FIGURE 6 in Reestablishment and recircumscription of Paepalanthus elatus (Eriocaulaceae, Poales), a threatened micro-endemic species from northern Serra do Cipó, Minas Gerais, Brazil
FIGURE 6. Scatter plot derived from the PCA of Paepalanthus argenteus var. argenteus (abbreviated as var. argenteus), of P. argenteus var. elatus (var. elatus) and of the neighboring population of var. argenteus to var. elatus.
FIGURE 2. Paepalanthus argenteus var. argenteus. A, B. Habitat. C–E in Reestablishment and recircumscription of Paepalanthus elatus (Eriocaulaceae, Poales), a threatened micro-endemic species from northern Serra do Cipó, Minas Gerais, Brazil
FIGURE 2. Paepalanthus argenteus var. argenteus. A, B. Habitat. C–E. Individuals representing morphological variants of the species. F–G. Rosettes of leaves showing variation in the indumentum: (F) indumentum similar to the type collection, from the population in the Fechados district neighboring P. argenteus var. elatus, (G) Individual from Diamantina. H–L. Variation in capitulum morphology from various stages of development. (Photos: Livia Echternacht)
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.