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65
datasets available to search
ShareScore release 0.9.0
Dataset results
65 results for “regulatory links”
A dual cis-regulatory code links IRF8 to constitutive and inducible gene expression in macrophages.
GEO Series GSE56121. Mus musculus. 53 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The activity of early-life gene regulatory elements is hijacked in aging through pervasive AP-1–linked chromatin opening
GEO Series GSE223050. Mus musculus. 336 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
An RNA polymerase III tissue and tumor atlas uncovers context-specific activities linked to 3D epigenome regulatory mechanisms
GEO Series GSE306294. Homo sapiens. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Mapping cis-regulatory elements in human excitatory and inhibitory neurons links psychiatric disease heritability and activity-regulated transcriptional programs [RNA-seq]
GEO Series GSE196855. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.
Scalable ultra-high-throughput single-cell chromatin and RNA sequencing reveals gene regulatory dynamics linking macrophage polarization to autoimmune disease [NIH-3T3_K562_ATAC_with_blocking]
GEO Series GSE253164. Mus musculus; Homo sapiens. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide enhancer-gene regulatory maps link causal variants to target genes underlying human colorectal cancer risk
GEO Series GSE222770. Homo sapiens. 40 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Transcription factor occupancy is linked to DNA methylation turnover at active regulatory regions
GEO Series GSE39739. Mus musculus. 10 samples. Type: Methylation profiling by high throughput sequencing.
Compendium of Disease-Linked Regulatory DNA Variants and Homeostatic Transcription Factors in Epidermis [mpra_tf_kos]
GEO Series GSE302354. Homo sapiens. 29 samples. Type: Other.
A dual cis-regulatory code links IRF8 to constitutive and inducible gene expression in macrophages.
GEO Series GSE56123. Mus musculus. 65 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Compendium of Disease-Linked Regulatory DNA Variants and Homeostatic Transcription Factors in Epidermis [cutandrun]
GEO Series GSE255543. Homo sapiens. 310 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mapping cis-regulatory elements in human excitatory and inhibitory neurons links psychiatric disease heritability and activity-regulated transcriptional programs [ATAC-seq]
GEO Series GSE196854. Homo sapiens. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes [PCHiC]
GEO Series GSE113481. Homo sapiens. 12 samples. Type: Other.
Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes [RNA-Seq]
GEO Series GSE113482. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
The promoter interactome of cardiomyocytes differentiated from human embryonic stem cells links regulatory elements to cardiac gene promoters
GEO Series GSE100720. Homo sapiens. 3 samples. Type: Other.
Scalable ultra-high-throughput single-cell chromatin and RNA sequencing reveals gene regulatory dynamics linking macrophage polarization to autoimmune disease [NIH-3T3_K562_ATAC_without_blocking]
GEO Series GSE253162. Homo sapiens; Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Regulatory Mechanisms Mediated by DNA methyltransferase 1 link the maternal Environment with the Development of the Embryo
GEO Series GSE98851. Rattus norvegicus. 12 samples. Type: Expression profiling by array.
A reduced TBX5-dependent gene regulatory network links atrial fibrillation and heart failure
GEO Series GSE311509. Mus musculus. 36 samples. Type: Non-coding RNA profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
Short-chain fatty acid metabolites propionate and butyrate are unique epigenetic regulatory elements linking diet, metabolism and gene expression
GEO Series GSE252653. Homo sapiens; Mus musculus. 67 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcription factor occupancy is linked to DNA methylation turnover at active regulatory regions [MeDIP-Seq]
GEO Series GSE39738. Mus musculus. 7 samples. Type: Methylation profiling by high throughput sequencing.
Mapping cis-regulatory elements in human excitatory and inhibitory neurons links psychiatric disease heritability and activity-regulated transcriptional programs
GEO Series GSE196207. Homo sapiens. 49 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.