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2,744 results for “restoration.”
Water quality in restored urban streams in Lexington, KY, USA
Stream-water grab samples were collected periodically from sampling locations upstream and downstream of restored stream reaches in Lexington, KY, USA, and analyzed for a suite of water quality characteristics including nitrate, cations, and pH. Study sites included streams receiving riparian reforestation or other conservation, as well as streams restored using a natural channel design approach. The goal of this sampling program was to evaluate to what extent stream restoration interventions can influence stream-water quality in an urban context.
Biological and Physical Monitoring Data of Restored Oyster Reef in Savannah River, Savannah, GA from May 2023 - February 2025
For the purposes of this study, we constructed two oyster reefs in Savannah, GA, USA using standard spat-on-shell restoration methodology. Reefs were constructed 1-2 meters from the marsh edge to reduce wave energy as it approached the shoreline, similar to a breakwater. We then conducted monitoring on the biological function of the reef, including live juvenile oyster coverage, size, and abundance for approximately 18 months. We also quantified the energy flux of waves offshore and onshore of the reef using water pressure measurements to determine the capability of these reefs at reducing wave energy. The oyster reefs in this study decreased wave energy by up to 40% compared to paired, non-reef control sites. Constructed oyster reefs also experienced healthy oyster population growth throughout the study, with live juvenile coverage of 17-40% almost 18 months post-deployment. This study took place in an erosion-prone area due to recreational and commercial boating traffic at the nearby Port of Savannah. Our results indicate that using restored oyster reefs as living shorelines is a technique with high potential for preventing shoreline loss in coastal areas vulnerable to anthropogenically-caused erosion. Restored Reef Site 1: 32.067957°, -80.985005° Control Site 1: 32.0675194°, -80.986369° Restored Reef Site 2: 32.062663°, -80.965147° Control Site 2: 32.063261°, -80.965889°
Survival Data of Strengthened and Non-Strengthened Oysters on Two Restored Reefs in Georgia, USA
The eastern oyster, Crassostrea virginica, is known to respond to chemical cues from their predators by strengthening their shell in defense. The chemical cues homarine and trigonelline, found in the urine of blue crabs, Callinectes sapidus, are two metabolic waste products known to cause this inducible defense in juvenile oysters. We tested whether this shell strengthening defense is beneficial for juvenile oysters in a restored reef setting by inducing oyster spat with chemical cues, placing them onto a restored reef and measuring their survival for 50-100 days. The first reef location is a previously restored reef (approximately 10 years old) with limited physical exposure to wind waves and boat wake. Juvenile oysters were placed at this site in September of 2021 and survival was measured for 49 days. The second reef location is a newly restored oyster reef (less than 1 year old) that acts as a living shoreline, with significant exposure to boat wake and wind waves. Juvenile oysters were protected from predation using mesh wrapping with an opening of 1 square cm and placed at the reef site in April 2023, where survival was monitored for 103 days. Site locations: Reef 1 (dock site) - 31.988948°, -81.024001° Reef 2 (living shoreline reef) - 32.067957°,-80.985005°
Ecology and restoration of montane meadows at Bunchgrass Ridge near the Andrews Experimental Forest, 1999-2013
In a region dominated by coniferous forests, montane meadows contribute greatly to landscape diversity, wildlife habitat, and other important ecological functions and societal values. Throughout the Pacific Northwest, suppression of fire and changes in climate and grazing pressure have led to rapid succession of meadow to forest. Faced by gradual loss of these habitats, land managers are experimenting with tree removal and prescribed fire as tools for restoration. Research at Bunchgrass Ridge explores the history of conifer encroachment, the consequences for meadow vegetation, and the potential to restore native meadows through tree removal and prescribed burning. Spatially explicit reconstructions of the invasion history provide the context for a large-scale restoration experiment testing the efficacy of tree removal, with or without prescribed fire. Measurements from the experimental plots include pre- and post-treatment data on plant species composition for subplots of known invasion history. Data from adjacent, uninvaded meadows serve as targets for assessing restoration success. Our ultimate goal is to determine whether tree removal is sufficient to reverse the effects of encroachment, whether fire is also necessary, and whether the duration or density of invasion pose barriers to meadow reassembly.
SRP01 Sequential prairie restoration experiment at Konza Prairie
Annual aboveground net primary productivity (ANPP) from the Sequential Prairie Restoration Experiment at the Konza Prairie Long-Term Ecological Research site in Manhattan, KS USA. The data (SRP011) include ANPP from the first three years of restoration in each of three restoration sequences initiated in different years. Data correspond to subplot and whole-plot analyses. The Sequential Prairie Restoration Experiment is a block design with 4 subplots (labeled A - D) within 4 main plots (numbered 1 - 4) sequentially replicated in three blocks (Sequences 1, 2 and 3), with the restoration in each block initiated in a different year (Sequence 1 initiated in 2010, Sequence 2 initiated in 2012, and Sequence 3 initiated in 2014). 'NO-COLL' indicates that variable was not measured, A period in the dataset indicates missing data. Plant species composition data include plant composition from the first two sequences (Sequence I restored in 2010 and Sequence II restored in 2012) in all years from 2010 to 2020 (SRP012); and from the first four sequences (I to IV restored every other year from 2010 to 2016) for the first five growing seasons in each sequence (SRP013).
PRP02 Plant diversity, richness, and plant species cover in konza prairie restoration heterogeneity plots, since 1998
The experiment is a randomized complete block design with four whole plot hetereogeneity treatments replicated within each of four blocks (n=16 whole plots). The whole plot treatments were created using different combinations of soil depth and nutrient manipulations. The control plots contained no depth or nutrient manipulations. The maximum hetereogeneity plots contained three 2 m x 8 m vertical strips assigned to ambient, enriched and reduced N treatments and four 2 m x 6 m horizontal strips assigned to deep and shallow soil to result in six treatment combinations. The maximum heterogeneity plots are a split-block design. Every plot contained 12 subplots (2 m x 2 m) for sampling. Prior to sowing, all of the plots were excavatedto a depth of approximately 25 cm. Natural limestone slabs were laid in strips assigned to the shallow soil treatment. The soil from all plots was then replaced, leveled, and disked (2-3 cm deep). In February 1998, we incorporated sawdust (49% C; C:N ratio=122) into the strips assigned to the reduced-N treatment. The average C concentration and bulk density in the surface 15 cm following long-term cultivation was 1.5% and 1.2 g cm-3, respectively. Sawdust was tilled into the soil at a rate of 5.5 kg dry wt./m2 to achieve a C concentration representative of native prairie soil (approx. 3% C). Surface applications of granular sugar were initiated in 2004 at a rate of 200 g sucrose m-2 (84.22 g C/m2) 3-4 times each growing season. Strips assigned to the enriched-N treatment were fertilized with 5 g N m2/y (applied as ammonium-nitrate) in July of the first growing season and early June of each subsequent years.
Data from Bieri Thesis: Evaluating Coastal Protection Benefits of Restored Oyster Reef Designs - 2022
This dataset consists of spreadsheets used in the creation of: "Elizabeth Bieri, Evaluating Coastal Protection Benefits of Restored Oyster Reef Designs. MS Thesis, University of Virginia, Charlottesville, VA. Advisors: Matthew Reidenbach & Patricia Wiberg, 2022" (https://doi.org/10.18130/2b04-wz72). Documentation on methods and types of data are given in the thesis and are not repeated here. There are two .zip files. One contains the original Excel workbooks. The other contains the data from individual sheets within the workbooks as comma-separated-value (.csv) text files. The file listing for the CSV files are: Archive: Bieri_Comma_separated_Value_Files.zip Length Date Time Name --------- ---------- ----- ---- 0 2025-12-15 12:47 Bieri_Comma_separated_Value_Files/ 1787 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/elevation_crests.csv 239 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/elevation_S4.csv 273 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/elevation_S7.csv 652 2025-12-15 12:45 Bieri_Comma_separated_Value_Files/erosionpins_exposed.csv 476 2025-12-15 12:45 Bieri_Comma_separated_Value_Files/erosionpins_exposed_no_reef.csv 102 2025-12-15 12:46 Bieri_Comma_separated_Value_Files/erosionpins_S4.csv 97 2025-12-15 12:46 Bieri_Comma_separated_Value_Files/erosionpins_S7.csv 297 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/grainsize_july.csv 290 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/grainsize_oct.csv 399 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/infauna_om_All.csv 509 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/infauna_om_July2021.csv 507 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/infauna_om_Oct2021.csv 1242 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/infauna_om_Sed_OM.csv 516 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/infauna_om_Sept2020.csv 913981 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/jul2021waveS4.csv 715881 2025-12-15 12:41 Bieri_Comma_separated_Value_Files/jul2021waveS7.csv 5251
Meta-analysis of ecosystem services associated with oyster restoration on the Eastern and Gulf coasts of the US
We conducted a meta-analysis to systematically quantify the success and uncertainty of oyster reef restoration for a suite of biological, biogeochemical, and physical ecosystem services relative to both degraded and natural reference habitats. We focused on the eastern oyster, Crassostrea virginica. To evaluate whether restored eastern oyster reefs enhance ecosystem services relative to unaltered, degraded habitats and whether restored reefs provide ecosystem services equivalent to reference reefs, we synthesized data and calculated log response ratios for 245 restored-degraded reef pairs and 136 restored-reference reef pairs from 106 publications collected along 3500 km of U.S. Gulf of Mexico and Atlantic coastlines.
Oyster fauna lengths, counts, and biomass from restored and reference reefs in Virginia coastal bays, 2005-2023
Oyster reef fauna counts and lengths were sampled at natural "reference" reefs and restored shell plant reefs located in the Virginia Coast Reserve. Overfishing and disease decimated oyster reefs in the Virginia Coast Reserve in the 1900s. Reference reefs were defined as remnant reefs that naturally recovered in the early 2000s to develop the pronounced vertical structure and multiple oyster size classes that represent the desired endpoint of restoration efforts. Nearly every year since 2003, The Nature Conservancy and Virginia Marine Resource Commission have constructed oyster reefs in intertidal areas in the VCR. To construct the restored reefs, practitioners launched dredged, fossilized oyster shell from barges to intertidal locations chosen for their bottom stability and accessibility (locations lacked oysters prior to construction). Whelk shell supplemented the oyster shell at some of the restored reefs. TNC practitioners monitor select restored and reference reefs annually for adult and spat live oysters, adult and spat box oysters, mud crabs, mud snails, oyster drills, live clams, and mussels.
Investigating effect chains from cognitive and noise-induced short-term stress build-up to restoration in an urban or nature setting using 360° VR
<p>Dataset for demographic, psychological and physiological data obtained for RESTORE (Experiment 1 WP1). Study results are published in the article titled "Investigating effect chains from cognitive and noise-induced short-term stress build-up to restoration in an urban or nature setting using 360° VR" in the Journal of Environmental Psychology. Explanations on all variables (column names) in the datasets are given either in the second spreadsheet in each Excel file or in the csv files appended with _legend.csv (see latest version of the dataset). File 'Psychophysiological_participant_data_aggregated' is aggregated per participant (single or mean values), and the file 'Restoration_EDA_baseline-corrected_aggregated' contains EDA data aggregated per time point per restoration setting (Nature vs Urban) and prior cognitive demand condition. Methodological details on how the data was obtained and processed are given in the Open Access article.</p>
Global restoration opportunities in tropical rainforest landscapes - Supplementary Materials - Spatial Data Layers
<p><strong>Global restoration opportunities in tropical rainforest landscapes</strong></p> <p><strong>Sci Adv 5 (7), eaav3223</strong></p> <p><strong>DOI: 10.1126/sciadv.aav3223</strong></p> <p><strong><a href="https://advances.sciencemag.org/content/5/7/eaav3223">https://advances.sciencemag.org/content/5/7/eaav3223</a></strong></p> <p><strong>Supplementary Materials</strong></p> <p><strong><a href="https://advances.sciencemag.org/content/suppl/2019/07/01/5.7.eaav3223.DC1">https://advances.sciencemag.org/content/suppl/2019/07/01/5.7.eaav3223.DC1</a></strong></p> <p><strong>Spatial Data layers:</strong></p> <p><strong><a href="https://doi.org/10.5281/zenodo.3233495">https://doi.org/10.5281/zenodo.3233495</a></strong></p> <p><strong>_OutR10:</strong></p> <p><strong>r_10.img → Global restoration opportunity score (ROS)</strong></p> <p><strong>r_10_sc.img → Global restoration opportunity score (ROS) – rescaled 0-1</strong></p> <p><strong>r_10_nt_sc.img → Neo Tropic restoration opportunity score (ROS) – rescaled 0-1</strong></p> <p><strong>r_10_aa_sc.img → Australiasia restoration opportunity score (ROS) – rescaled 0-1</strong></p> <p><strong>r_10_at_sc.img → Afro Tropic restoration opportunity score (ROS) – rescaled 0-1</strong></p> <p><strong>r_10_im_sc.img → Indo Malay restoration opportunity score (ROS) – rescaled 0-1</strong></p> <p><strong>r_10_nt_sc.img → Neo Tropic restoration opportunity score (ROS) – rescaled 0-1</strong></p> <p> </p> <p><strong>_OutBasics:</strong></p> <p><strong>r_1.img → Study Area</strong></p> <p><strong>r_2.img → Restorable Area</strong></p> <p><strong>r_3.img → Restoration Benefits</strong></p> <p><strong>r_4.img → Restoration feasibility</strong></p> <p><br> <strong>_OutCountry:</strong></p> <p><strong>r_10_XXX_sc.tif → restoration opportunity score (ROS) for country XXX – rescaled 0-1</strong></p> <p><br> <strong>_OutHotspots:</strong></p> <p><strong>r_10_hotspot_XXX_hotspot_area_sc.tif → restoration opportunity score (ROS) for conservation hotspot area XXX – rescaled 0-1</strong></p> <p><strong>r_10_hotspots_upper60.img → Areas with restoration opportunity score (ROS) above 0.6 in conservation hotspots</strong></p> <p><br> <strong>_OutKBA:</strong></p> <p><strong>r_10_XXX_sc.tif → restoration opportunity score (ROS) for Key Biodiversity Area XXX – rescaled 0-1</strong></p> <p><strong>r_10_kba_upper60.img → Areas with restoration opportunity score (ROS) above 0.6 in Key Biodiversity Areas</strong></p> <p><br> <strong>_OutAichi:</strong></p> <p><strong>r_10_aichi_XXX.tif → Top 15% area of with highest restoration opportunity score (ROS) in country XXX</strong></p> <p><strong>r_10_aichi.img → Top 15% area of with highest restoration opportunity score (ROS) global</strong></p> <p><br> <strong>_OutBonn:</strong></p> <p><strong>r_10_XXX_Bonn.img → Area with highest restoration opportunity score (ROS) in country XXX according to their Bonn Challenge commitments</strong></p> <p> </p> <p><strong>_OutParis:</strong></p> <p><strong>r_10_at_paris.img → Area with highest restoration opportunity score (ROS) in Afro Tropic Nationally Determined Contributions to the Paris Climate Agreement</strong></p> <p><strong>r_10_im_paris.img → Area with highest restoration opportunity score (ROS) in Indo Malay Nationally Determined Contributions to the Paris Climate Agreement</strong></p> <p><strong>r_10_nt_paris.img → Area with highest restoration opportunity score (ROS) in Neo Tropic Nationally Determined Contributions to the Paris Climate Agreement</strong></p> <p><br> <strong>_OutTEOW:</strong></p> <p><strong>r_10_ECOREGION_XXX_sc.tif → restoration opportunity score (ROS) for Ecoregion XXX – rescaled 0-1</strong></p> <p><strong>r_10_ECOREGION_upper60.img → Areas with restoration opportunity score (ROS) above 0.6 in Ecoregions</strong></p> <p> </p> <p><strong>_OutAll</strong></p> <p><strong>alltargets.img → Area with highest restoration opportunity score (ROS) according to all targets (excluded from the paper)</strong></p> <p> </p>
Data, Analytical Code, and Model Outputs From: Restoration Treatments Enhance Tree Growth and Alter Climatic Constraints During Extreme Drought
<p>This archive includes data (forest inventories, tree ring measurements, climate variables), statistical code, model outputs, and a preprint copy of Rodman et al. (2024). For more information on specific information, processing methods, and data formats, see "README.md" or "README.html" files associated with this archive</p>
Beyond the passive–active dichotomy: aligning research with the intervention continuum framework of ecological restoration
<p>The dataset and R script file are associated with the publication, "Krishnan, A. and Osuri, A.M. (2022), Beyond the passive-active dichotomy: aligning research with the intervention continuum framework of ecological restoration. Restoration Ecology:e13828. https://doi.org/10.1111/rec.13828"</p> <p>Please refer to the readme.txt file for more information on the dataset and analyses.</p>
The recovery of plant community composition following passive restoration across spatial scales, Cedar Creek Ecosystem Science Reserve, 1983-2016
1. Human impacts have led to dramatic biodiversity change which can be highly scale-dependent across space and time. A primary means to manage these changes is via passive (here, the removal of disturbance) or active (management interventions) ecological restoration. The recovery of biodiversity, following the removal of disturbance is often incomplete relative to some kind of reference target. The magnitude of recovery of ecological systems following disturbance depend on the landscape matrix, as well as the temporal and spatial scales at which biodiversity is measured. 2. We measured the recovery of biodiversity and species composition over 27 years in 17 temperate grasslands abandoned after agriculture at different points in time, collectively forming a chronosequence since abandonment from one to eighty years. We compare these abandoned sites with known agricultural land-use histories to never-disturbed sites as relative benchmarks. We specifically measured aspects of diversity at the local plot-scale (α-scale, 0.5m2) and site-scale (γ-scale, 10m2), as well as the within-site heterogeneity (β-diversity) and among-site variation in species composition (turnover and nestedness). 3. At our α-scale, sites recovering after agricultural abandonment only had 70% of the plant species richness (and ~30% of the evenness), compared to never-ploughed sites. Within-site β-diversity recovered following agricultural abandonment to around 90% after 80 years. This effect, however, was not enough to lead to recovery at our γ-scale. Richness in recovering sites was ~65% of that in remnant never-ploughed sites. The presence of species characteristic of the never disturbed sites increased in the recovering sites through time. Forb and legume cover declines in years since abandonment, relative to graminoid cover across sites. 4. Synthesis. We found that, during the 80 years after agricultural abandonment, old-fields did not recover to the level of biodiversity in remnant never-plough
South Bay Salt Pond Restoration Project – Phase-1 (2010-2012) Sentinel Species Health Monitoring.
The South Bay Salt Pond Restoration Program (SBSPRP) is the largest wetland restoration project in the western United States, restoring approximately 15,000 acres of former salt evaporation ponds (southbaysaltpond.org) to benefit wildlife and fish populations. Restoration on a large scale comes with many risks and uncertainties. Therefore, restoration was planned in several phases, with an adaptive management approach and applied scientific studies to address the uncertainty of different restoration strategies. These strategies included breaching ponds to create fully tidal habitats, installing tide gates to create muted tidal habitats and active management of existing ponds. This mosaic of restoration designs was intended to benefit many species of salt marsh dependent biota, including birds, fish and mammalian species. The Longjaw Mudusucker (Gillichthys mirabilis) is a resident estuarine fish, ranging from Mexico to Humboldt Bay, California, USA, and is one of the most abundant fishes in high intertidal salt-marsh habitat. The Longjaw Mudsucker depends on high intertidal creeks in marshes dominated by pickleweed (Sarcocornia sp). The fish reside within burrows in soft sediments and is the only fish species that can remain in intertidal creeks during low tide when the creeks completely de-water. Longjaw Mudsucker have a wide tolerance range for salinity, up to 80-ppt and can be the only fish species to occupy industrial salt ponds in the San Francisco Estuary. In this study, UC Davis conducted minnow trap sampling in remnant pickleweed marshes and adjacent salt pond restorations to document the distribution, relative abundance, and condition (length-weight) of fish occupying these extant and restored habitats. During the pilot effort in late summer-fall of 2010 we conducted minnow trap sampling across a number of sites in the Alviso Marsh, Eden Landing Marsh, Ravenswood Marsh and Bair Island Marsh, sampling muted restoration ponds, tidal restoration ponds and remn
Effect of Restoration on Physical and Chemical Peat Properties in Previously Drained Boreal Peatlands, latitude 57-63, Sweden, 2021
The major objective behind peatland restoration is to improve ecosystem services, such as increased biodiversity, increased carbon sequestration, increased groundwater storage, and improved surface water quality. However, a century or more of drained conditions has drastically changed the soil properties in relation to natural wetlands and this is likely to profoundly influence the potential for various biogeochemical peat processes. Thus, peatland restoration may result in undesired impacts and potential environmental threats. Two such undesired effects are increased methane production and increased mercury methylation. In this study, we investigated how nine boreal peatlands across a latitudinal gradient in Sweden have been affected by rewetting after up to a century of drained conditions. Each peatland was sampled for three 50 cm deep peat cores that were analyzed for carbon, nitrogen, δ13C, δ15N, bulk density, and organic matter proportion. Adjacent to each restored peatland, we sampled a corresponding pristine (natural) peatland to facilitate a comparison of how the peat properties have been affected by drainage and subsequent rewetting of the peatlands. Groundwater depth was monitored at all peatland locations to confirm restored conditions at the rewetted peatlands. The results indicate that a long period of drained conditions and subsequent rewetting have changed the peat properties, with differences shown in C/N ratio, dry bulk density, and organic matter content. Rewetting will thus not regenerate a pristine environment. Instead, it creates new conditions to which various biogeochemical processes will respond and these do not necessarily represent conditions prior to disturbance. Our study will provide background information to understand the biogeochemical dynamics in peatlands after restoration, especially since the study covers a large span of nutrient conditions and catchment settings. This understanding will be fundamental for the development of strat
Repeated vegetation monitoring for riparian forest restoration project, Santa Clara River, CA, 2015-2023.
We implemented a spatially-patterned methodology to restore 87 ha of riparian forest habitat, selectively applying multiple restoration approaches based on localized differences in degradation severity throughout the project area. This work was conducted as part of a large, collaborative effort to control invasive Arundo donax and reestablish contiguous natural habitat throughout the Santa Clara River floodplain in southern California.
Compost Amendments up to One Inch Restore Dry Rangeland Soil Health and Plant Productivity in New Mexico, 2020-2022
Dry rangelands are important systems for coproducing food and other ecosystem services, but degradation of productivity, diversity, and water holding capacity may require active intervention to restore. Use of compost amendments on grasslands has been shown to improve many outcomes related to carbon, water, and nutrients unless excessive amounts are used, but practitioners lack guidance of optimal and cost-effective use to meet their management goals. We compared compost additions from 0-2.54 cm at two ranches in New Mexico and measured plant composition and biomass, soil characteristics such as bulk density, infiltration rate, aggregate stability, and total carbon content under baseline conditions and one- and two years after addition.
Litterbag decomposition after runnel restoration in southern Massachusetts salt marshes from 2020-2022.
Natural disturbances, sea level rise, and historic human impacts to salt marshes have increased impounded water on marsh surfaces, resulting in vegetation loss and the associated loss of important ecosystem services such as carbon storage. Runnels are a climate adaptation technique designed to restore salt marsh habitat by reestablishing a tidal connection between impounded water and a nearby drainage feature. While runnels can drain impounded water and promote revegetation, the unintended effects of altering redox conditions remain unknown. Panne formation and runnel restoration could alter organic matter decomposition of litter. Therefore, we measured litterbag decomposition in two MA marshes for 3 years: 1 year prior to restoration, and two years post.
Sediment porewater salinity and moisture at runnel restoration sites in SE Massachusetts from 2020 - 2022.
Natural disturbances, sea level rise, and historic human impacts to salt marshes have increased impounded water on marsh surfaces, resulting in vegetation loss and the associated loss of important ecosystem services. Runnels are a climate adaptation technique designed to restore salt marsh habitat by reestablishing a tidal connection between impounded water and a nearby drainage feature. Porewater salinity and moisture content are two sediment characteristics that could potentially be altered by panne formation and runneling, which could impact rates of carbon decomposition. We installed runnels in two marshes in SE Massachusetts in 2020, and monitored salinity and moisture content changes for two years (2021-2022).
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.