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271
datasets available to search
ShareScore release 0.9.0
Dataset results
271 results for “scATAC”
Systemic 4-1BB stimulation augments extrafollicular memory B cell formation and recall responses during Plasmodium infection [scATAC-seq]
GEO Series GSE282527. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
3D chromatin hubs as regulatory units of identity and survival in acute T-cell leukemia [scATAC-Seq]
GEO Series GSE280728. Homo sapiens. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Temporal chromatin accessibility changes define transcriptional states essential for osteosarcoma metastasis [scATAC-Seq]
GEO Series GSE215758. Homo sapiens. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multi-scale chromatin footprinting reveals wide-spread alterations to the structure of DNA regulatory elements [scATAC]
GEO Series GSE216406. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Aging alters the epigenetic asymmetry of HSC division [scATAC-Seq]
GEO Series GSE116707. Mus musculus. 48 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Thymic mimetic cells function beyond self-tolerance [scATAC-Seq Multiome]
GEO Series GSE236667. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Chromatin accessibility profile at the single cell level of splenic LCMV-specific B cells in acute versus chronic LCMV infection [scATAC-seq]
GEO Series GSE225932. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide maps of chromatin state in mouse perinatal testes [scATAC-seq]
GEO Series GSE164439. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Heterogeneity and Homogeneity in Treg responses to Interleukin-2 [scATAC-seq2: IL2/JES6-1 timecourse]
GEO Series GSE299361. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Characterization of human pluripotent stem cell differentiation by single-cell dual-omics analyses (scATAC-seq)
GEO Series GSE216323. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Synonymous mitochondrial DNA variation impairs CD8 T cell fate via codon affinity [Tcell Culture scATAC]
GEO Series GSE216911. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Targeting signaling rewiring and resistant subpopulations in Philadelphia Chromosome-like Acute Lymphoblastic Leukemia [scATAC-seq]
GEO Series GSE263708. Homo sapiens. 28 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multimodal antigenic escape to GPRC5D-targeted T-cell engagers in multiple myeloma [scATAC-seq]
GEO Series GSE301287. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Regulation of murine follicle-stimulating hormone β subunit transcription by newly identified enhancers [scATAC-seq; Mouse Pituitaries]
GEO Series GSE310460. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Thymic iNKT cells in Prkd2/3 mice (scRNA/TCR-seq, scATAC-seq)
GEO Series GSE288015. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
Evolutionary Process Underlying Receptor Gene Expansion and Cellular Divergence of Olfactory Sensory Neurons in Honeybees. [scATAC-Seq]
GEO Series GSE248096. Apis mellifera. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation [scATAC-Seq]
GEO Series GSE96769. Homo sapiens. 2784 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ARID1B regulates BCL11B-mediated non-canonical Activin signaling to maintain mesenchymal stem cell homeostasis in the mouse incisor [scATAC-seq]
GEO Series GSE237304. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Designing a single cell ATAC-Seq (scATAC-Seq) dataset to validate long read RNA-Seq isoforms and benchmark scATAC-Seq analysis methods II
GEO Series GSE224045. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single Cell Profiling of Chromatin Accessibility in Cotton Ovule Epidermis Durring Early Fiber Development [scATAC-seq]
GEO Series GSE282999. Gossypium hirsutum. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.