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36 results for “single molecule RNA”

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geo24/100

Analysis of the transcriptome response to drought in Larix kaempferi using single-molecule long read isoform sequencing with de novo RNA-seq reads [RNA-Seq]

GEO Series GSE154534. Larix kaempferi. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2021View details →
geo24/100

Single-molecule long-read sequencing reveals a conserved intact long RNA profile in sperm

GEO Series GSE137490. Homo sapiens; Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2021View details →
geo24/100

Regulating lineage progression of cortical neural stem cells by extrinsic signaling molecule SHH [single-cell RNA-seq]

GEO Series GSE140816. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2020View details →
geo20/100

Single-molecule nascent RNA sequencing reveals regulatory domain architecture ant promoters and enhancers

GEO Series GSE116472. Homo sapiens; Mus musculus. 14 samples. Type: Other; Expression profiling by high throughput sequencing.

openGEO-OpenJul 2018View details →
geo16/100

Landscape of Transcription Termination in Arabidopsis Revealed by Single-molecule Nascent RNA Sequencing

GEO Series GSE184100. Arabidopsis thaliana. 6 samples. Type: Other; Methylation profiling by high throughput sequencing.

openGEO-OpenSep 2024View details →
geo16/100

Single-molecule analysis of RNA:protein interactions reveals sequential binding of different YTHDF proteins to the same mRNA molecules [TRIBE_STAMP]

GEO Series GSE200712. Homo sapiens. 28 samples. Type: Other.

openGEO-OpenOct 2022View details →
geo16/100

Prediction of m6A and m5C at single-molecule resolution reveals a transcriptome-wide co-occurrence of RNA modifications

GEO Series GSE253150. synthetic construct. 2 samples. Type: Other.

openGEO-OpenJan 2024View details →
geo16/100

Single-molecule analysis of RNA:protein interactions reveals sequential binding of different YTHDF proteins to the same mRNA molecules [Polysome]

GEO Series GSE201538. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenOct 2022View details →
geo16/100

Landscape of Transcription Termination in Arabidopsis Revealed by Single-molecule Nascent RNA Sequencing [BS-seq]

GEO Series GSE184099. Arabidopsis thaliana. 2 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenSep 2024View details →
geo16/100

Landscape of Transcription Termination in Arabidopsis Revealed by Single-molecule Nascent RNA Sequencing [FLEP-seq]

GEO Series GSE178980. Arabidopsis thaliana. 4 samples. Type: Other.

openGEO-OpenSep 2024View details →
geo16/100

Single-molecule analysis of RNA:protein interactions reveals sequential binding of different YTHDF proteins to the same mRNA molecules [RIP-Seq]

GEO Series GSE201540. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenOct 2022View details →
geo12/100

Single-molecule analysis of RNA:protein interactions reveals sequential binding of different YTHDF proteins to the same mRNA molecules.

GEO Series GSE200713. Homo sapiens. 136 samples. Type: Other; Expression profiling by high throughput sequencing.

openGEO-OpenOct 2022View details →
geo12/100

Simultaneous identification of m6A and m5C reveals coordinated RNA modification at single-molecule resolution [HeLa cells]

GEO Series GSE211759. Homo sapiens. 6 samples. Type: Other.

openGEO-OpenOct 2022View details →
geo12/100

Simultaneous identification of m6A and m5C reveals coordinated RNA modification at single-molecule resolution [mouse frontal cortex]

GEO Series GSE211760. Mus musculus. 15 samples. Type: Other.

openGEO-OpenOct 2022View details →
geo12/100

Simultaneous identification of m6A and m5C reveals coordinated RNA modification at single-molecule resolution

GEO Series GSE211762. Homo sapiens; Mus musculus. 21 samples. Type: Other.

openGEO-OpenOct 2022View details →
zenodo4/100

Supplemental Material for "Single-molecule dynamics of DNA methyltransferase DnmA are regulated by DNA methylation and RNA-DNA hybrids"

<p>Raw data for single-particle tracking analysis.</p>

restrictedFeb 2022View details →

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record