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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
108
datasets available to search
ShareScore release 0.9.0
Dataset results
108 results for “spatial gene expression”
Spatial transcriptomics in embryonic mouse diaphragm muscle reveals regional gradients and subdomains of developmental gene expression
GEO Series GSE244014. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Kidney single-cell transcriptomes predict spatial corticomedullary gene expression and tissue osmolality gradients
GEO Series GSE145690. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Spatial clustering and common regulatory elements lead to TGF-β induced concerted gene expression
GEO Series GSE122093. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.
Spatially-resolved gene expression patterns of fibrosing ILDs [RNA-Seq]
GEO Series GSE255173. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.
Spatial gene expression profile of the brain from WT and Sema6d-/- mice
GEO Series GSE220799. Mus musculus. 4 samples. Type: Other.
GENE EXPRESSION WITHIN A HUMAN CHOROIDAL NEOVASCULAR MEMBRANE USING SPATIAL TRANSCRIPTOMICS
GEO Series GSE234047. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomic profiling of gene expression alterations following ACBP/DBI inhibition in a MASH-Driven HCC mouse model
GEO Series GSE296545. Mus musculus. 4 samples. Type: Other.
Gene expression profile at single cell level of an orthotopic mouse model with ZEB1 knockdown in the KPC cell line and control group mouse [spatial transcriptomic]
GEO Series GSE281083. Mus musculus. 2 samples. Type: Other.
A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2 [gene expression levels]
GEO Series GSE164013. Homo sapiens. 80 samples. Type: Expression profiling by high throughput sequencing.
Spatial hepatocyte plasticity of gluconeogenic gene expression and gluconeogenic activity during the metabolic transitions between fed, fasted and starvation states [RNA-Seq]
GEO Series GSE263415. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Spatial Gene Expression of Human Coronary Arteries Revealed the Molecular Features of Diffuse Intimal Thickening in Explanted Hearts
GEO Series GSE283269. Homo sapiens. 6 samples. Type: Other.
Spatial reconstruction of single-cell gene expression
GEO Series GSE66688. Danio rerio. 1152 samples. Type: Expression profiling by high throughput sequencing.
Maternal siRNAs mediate spatial and temporal regulation of gene expression and seed development in Arabidopsis
GEO Series GSE47722. Arabidopsis thaliana. 18 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Cohesin regulates gene expression through spatial clustering of enhancer elements
GEO Series GSE61428. Mus musculus. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Profiling the Microenvironment in Tuberous Sclerosis Complex-Associated Angiomyolipoma: Insights from Spatial Gene Expression Analysis
GEO Series GSE299165. Homo sapiens. 3 samples. Type: Other.
Spatial gene expression profiling of aortitis samples.
GEO Series GSE306150. Homo sapiens. 10 samples. Type: Other.
Spatial Differences in Gene Expression in the Bovine Oviduct
GEO Series GSE75442. Bos taurus. 15 samples. Type: Expression profiling by array; Third-party reanalysis.
Spatial hepatocyte plasticity of gluconeogenic gene expression and gluconeogenic activity during the metabolic transitions between fed, fasted and starvation states [targeted scRNA-seq]
GEO Series GSE263419. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Spatial control of gene expression by miR319-regulated TCP transcription factors in leaf development
GEO Series GSE99854. Arabidopsis thaliana. 18 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics reveals expression of novel genes during the remodelling of the embryonic human heart
GEO Series GSE244723. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.