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830 results for “tumor microenvironment”
A Riskscore Model for Predicting Survival, Tumor Microenvironment, Immunotherapy and drug sensitivity of Lung Squamous Cell Carcinoma Based on PI3K/AKT/MTOR Pathway-Related Genes
<p>Firstly, the data we provide is the raw data downloaded from the TCGA database. Secondly, we provide the following explanations for the raw data, taking Figure 1 as an example:</p> <p>First, we selected a LUSC dataset from the TCGA database that includes RNA-seq data (FPKM values) and clear clinical information, consisting of 51 normal samples and 501 LUSC samples. The raw data <span>can be found in</span> the "mRNA" document in the "Fig.1" file<span>, and t</span>he data includes TCGA <span>id</span> information.</p> <p>Next, the data was imported into "mRNA_edgeR" to analyze whether the RNA-seq data from these 552 samples meet the criteria of |logFC| > 0.585 and FDR < 0.05, <span>and the results are shown in</span> the "diffSig" table. Subsequently, the genes in the "diffSig" table were intersected with 105 PAGs, <span>and</span> 44 key PAGs <span>were identified, </span>as shown in Figure 1.</p> <p>The <span>other</span> figures can <span>also </span>be reproduced sequentially based on the methods described <span>above</span>.</p> <p>Furthermore, due to the limited number of LUSC patients, the clinical information in the database is relatively incomplete. Hence, the clinical information that we provide constitutes the entire content available in the database.</p>
Dataset for the paper "Analyses of tumor microenvironment in patients with advanced renal cell carcinoma receiving immunotherapy(Meet-URO 18 study)."
<p>Dataset for the paper "Analyses of tumor microenvironment in patients with advanced renal cell carcinoma receiving immunotherapy(Meet-URO 18 study)."</p>
Single-cell transcriptome analysis reveals evolving tumor microenvironment induced by immunochemotherapy in nasopharyngeal carcinoma
<p>18 bulks and 11 single-cell RNA sequencing samples from paired before anti-PD-1 contained treatment and on treatment in patients with treatment-naive high-risk metastatic locally advanced NPCs were obtained. We aim to explore the mechanism of response heterogeneity for locally advanced NPCs underwent immunochemotherapy.</p>
IL-2 inside tumor microenvironment is essential and sufficient to reinvigorate CD8+ T cells
<p>The single-cell RNA seq data of day 10 and day 20. </p>
Mapping and modeling human colorectal carcinoma interactions with the tumor microenvironment
<p>This dataset can be interactively explored with VisCello (https://github.com/qinzhu/VisCello). Please install VisCello and use e.g. "cello("path_to/hcc_main_cello")" to load the human colon cancer single cell dataset.</p> <p> </p>
Prospective Biobanking Study in Cancer Patients Aiming at Better Understand the Link Between the Molecular Alterations of the Tumor Itself, Its Microenvironment and Immune Response (SCANDARE)
ClinicalTrials.gov study NCT03017573. IPD Sharing: YES. Countries: 1. Publications: 1.
Tumor Microenvironment in Ovarian Cancer
ClinicalTrials.gov study NCT06272240. IPD Sharing: Not stated. Countries: 1. Publications: 8.
Targeting the Tumor Microenvironment in R/M SCCHN
ClinicalTrials.gov study NCT03844763. IPD Sharing: Not stated. Countries: 1. Publications: 7.
Study of the Association Between Tumor Microenvironment Macrophages and Treatment Response in Squamous Cell Carcinoma of the Anal Canal
ClinicalTrials.gov study NCT05019235. IPD Sharing: Not stated. Countries: 1. Publications: 5.
The Impact of Exercise on the Tumor Microenvironment in Patients With Lung Cancer
ClinicalTrials.gov study NCT07216209. IPD Sharing: NO. Countries: 1. Publications: 8.
Tumor Microenvironment in Patients With Localized Osteosarcoma Treated With Mifamurtide: a Translational Study
ClinicalTrials.gov study NCT03737435. IPD Sharing: NO. Countries: 1. Publications: 5.
Electrochemotherapy Induces Changes in the Tumor Microenvironment of Cutaneous and Subcutaneous Metastases in Patients With Cutaneous Melanoma
ClinicalTrials.gov study NCT06388252. IPD Sharing: UNDECIDED. Countries: 1. Publications: 26.
A Study of the Tumor Microenvironment Affecting the Efficacy of Immunotherapy for Esophageal Cancer
ClinicalTrials.gov study NCT06219031. IPD Sharing: UNDECIDED. Countries: 1. Publications: 14.
Moderate Whole Body Hyperthermia for Patients Undergoing Re-irradiation for Head and Neck Cancer -Influence on the Tumor Microenvironment
ClinicalTrials.gov study NCT03547388. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
The Effect of Immunological Heterogeneity of Tumor Microenvironment in the Prognosis of Gastric Cancer
ClinicalTrials.gov study NCT04819958. IPD Sharing: NO. Countries: 1. Publications: 6.
The Efficacy of Radiomics to Predict Tumor Microenvironment Markers and Comprehensive Therapy for Bladder Cancer
ClinicalTrials.gov study NCT06381895. IPD Sharing: NO. Countries: 1. Publications: 1.
Tumor-microenvironment Spatial Interaction to Identify Markers of Resistance to Therapy in HER2+ Breast Cancer Patients
ClinicalTrials.gov study NCT06518382. IPD Sharing: UNDECIDED. Countries: 1. Publications: 1.
Relationship Between Perioperative Treatment Efficacy and The Tumor Microenvironment for Locally Advanced Resectable Gastric Cancer.
ClinicalTrials.gov study NCT04850729. IPD Sharing: NO. Countries: 1. Publications: 0.
Relationship Between Standard Treatment Efficacy and The Tumor Microenvironment in Advanced Gastric Cancer
ClinicalTrials.gov study NCT04850716. IPD Sharing: NO. Countries: 1. Publications: 0.
Prehabilitation Exercise Program in Breast Cancer: Effects on Quality of Life and Tumor Microenvironment (PEP_BC)
ClinicalTrials.gov study NCT06360809. IPD Sharing: YES. Countries: 1. Publications: 30.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.