Find research datasets worth reusing

Fig. 18. The parasitic earwig Hemimerus talpoides Walker, 1871 in The Earwig Collection (Dermaptera) of the Manchester Museum, UK, with a complete type catalogue

Fig. 18. The parasitic earwig Hemimerus talpoides Walker, 1871, the Manchester Museum. Scale bar = 1 cm.

Figs 40–48 in The Earwig Collection (Dermaptera) of the Manchester Museum, UK, with a complete type catalogue

Figs 40–48. Holotypes (♂) of Spongiphoridae from the collection of the Manchester Museum. 40. Vostox bolivianus Brindle, 1971. 41. V. magnus Brindle, 1988. 42. V. dentatus Brindle, 1988. 43. Marava pygidiata Brindle, 1988. 44. M. pallida Brindle, 1988. 45. M. flavohumeralis Brindle, 1988. 46. M. nigrocincta Brindle, 1988 (no determination label). 47. M. gracilis Brindle, 1988. 48. M. parvula Brindle, 1988. Scale bars = 1 cm.

Fig. 12 in The Earwig Collection (Dermaptera) of the Manchester Museum, UK, with a complete type catalogue

Fig. 12. Male and female specimens of Labidura herculeana (Fabricius, 1798), with corresponding data labels; MMUE, accession numbers F3233.1871 and F3233.1872. Scale bar = 1 cm.

Fig. 17 in The Earwig Collection (Dermaptera) of the Manchester Museum, UK, with a complete type catalogue

Fig. 17. Letter from Karl Jordan to Hincks enclosed with 6 'Arixenia jacobsoni' specimens (MMUE, Brindle archive, item 55).

opencc-zeroJun 2019View details →

FIG. 2 in Catalogue des types de la collection de phasmes du Muséum national d'Histoire naturelle de Paris (Insecta, Phasmatodea)

FIG. 2. — Visualisation de la base de données associée à ce catalogue et disponible en ligne (A) et sur le site science.mnhn.fr (B); exemple de syntype de Prisopus piperinus Redtenbacher, 1906 (MNHN-EO-PHAS552).

opencc-zeroJun 2019View details →

FIG. 1 in Catalogue des types de la collection de phasmes du Muséum national d'Histoire naturelle de Paris (Insecta, Phasmatodea)

FIG. 1. — Exemple de prises de vues illustrant le catalogue disponibles sur le site science.mnhn.fr. Holotype de Phyllium maethoraniae Delfosse, 2015 (MNHN-EO-PHAS399) en vue dorsale (A), ventrale (B), latérale (C) et photo des étiquettes (D). Échelle: 1 cm.

opencc-by-4.0Dec 2023View details →

Data collection for Tsuji et al., 2023, Anoxygenic phototrophic Chloroflexota member uses a Type I reaction center

Supplementary data files associated with Tsuji et al., 2023, "Anoxygenic phototrophic Chloroflexota member uses a Type I reaction center". These files are used by code in a corresponding GitHub repository (<a href="https://github.com/jmtsuji/Ca-Chlorohelix-allophototropha-RCI">https://github.com/jmtsuji/Ca-Chlorohelix-allophototropha-RCI</a>) that shows how various analyses that are presented in the paper were conducted.Files included:<ul><li>HPLC-based spectroscopy data ("...-HPLC-run1.tsv.gz" or "...-HPLC-run2.tsv.gz") -- hyper-spectral data files, generated by a diode array detector, that are associated with pigment analyses in the paper. See the corresponding Github repo for how these files are analyzed.</li><li>Supplementary data about "Ca. Chloroheliales"-associated RCI:<ul><li>I_TASSER_homology_models_full_output.tar.gz -- Gzipped tarball containing the full output from I-TASSER for homology models of key phototrophy-related genes encoded by 'Candidatus Chlorohelix allophototropha' and 'Candidatus Chloroheliales bin L227-5C'. After unpacking the tarball, view a summary of the I-TASSER output for each gene by clicking on the 'index.html' file in that gene's folder.</li></ul></li><li>Boreal Shield lake survey data:<ul><li>lake_survey_MAGs.tar.gz -- Gzipped tarball containing the full collection of 756 metagenome-assembled genomes (MAGs) recovered from the Boreal Shield lake survey, corresponding to those mentioned in Supplementary Data 3. The FastA nucleotide genome sequences, FastA nucleotide predicted protein-coding gene sequences, FastA amino acid predicted protein sequences, and Genome Flat Files (GFFs) for all genomes are provided in the fna, ffn, faa, and gff subdirectories, respectively.</li><li>lake_survey_MAGs_eggnog_annotations.tar.gz -- Gzipped tarball containing annotations (produced via EggNOG) for all predicted proteins among the 756 MAGs recovered from lake metagenome data. Because proteins were pre-clustered prior to annotation, a "orf2gene" file inside the tarball maps the gene clusters to the ORF IDs used for each genome.</li><li>lake_survey_MAGs_featureCounts.tsv.gz -- GZipped tab-separated table containing the mapping statistics of metatranscriptome reads on all protein-coding genes from the 756 MAGs recovered from lake metagenome data.</li><li>lake_survey_Ca_Chloroheliales_MAGs_info.tar.gz -- A subset of information from the previous three files specific to genome bins ELA319 and ELA729, which represent RCI-encoding "Ca. Chloroheliales" members.</li></ul></li><li>Intermediate files involved in some of the genome assembly work in this paper:<ul><li>Capt_S15_sequencer_data_raw.tar.gz -- Gzipped tarball containing the raw Illumina MiSeq output data for the 'Candidatus Chlorohelix allophototropha' subculture 15 sequencing run. The run represents a read cloud sequencing run relying on TELL-Seq technology. Indices can be parsed directly from raw output data using the Tell-Read pipeline.</li><li>scaffold.full.fasta.gz -- the assembled scaffolds generated using Tell-Read and Tell-Link on the above raw MiSeq output data.</li><li>Ca_Chloroheliaceae_bin_L227_5C_prokka_ORFs.faa.gz -- predicted open reading frames (ORFs) from the curated genome of 'Candidatus Chloroheliales bin L227-5C'. These ORFs were predicted using prokka and were used for some of the analyses presented in the paper. Most analyses used the annotations available on NCBI (generated by PGAP) for this strain.</li></ul></li></ul>

Fig. 10 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 10. Dendronephthya flabellifera (Studer, 1888), NMBE-299. A, Sclerites from surface layer of upper part of stalk; B, sclerites from interior of upper part of stalk; C–E, details of uppermost parts of such sclerites; F, flattened radiates from interior of upper part of stalk; G, rods from interior of upper part of stalk. Scales: 0.10 mm (A, C–G); 1.0 mm (B).

Fig. 17 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 17. Kükenthal's (1895) Dendronephthya pumilio, (ZSM). A, Polyp showing anthocodial armature; B, point spindles; C, tentacle sclerites. Scales: 0.1 mm.

Fig. 16 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 16. Dendronephthya pumilio (Studer, 1888), NMBE-310. A, Sclerites from surface layer of stalk; B, C, sclerites from interior of stalk. Scale: 0.10 mm.

Fig. 3 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 3. Dendronephthya doederleini Külenthal, 1905, NMBE-295-1. A, Spindles from surface layer of branches; B, detail of upper part of such a spindle; C, rod from surface layer of branches; D, flat radiates from interior of branches; E, rods from interior of branches. Scales: 1 mm (A); 0.10 mm (B–E).

Fig. 7 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 7. Dendronephthya punicea (Studer, 1888), NMBE-303-1. A, Spindles from surface layer of branches; B, detail of upper part of such a spindle; C, rod from surface layer of branches; D, detail of lower part of such a rod; E, sclerites from interior of branches; F, sclerites from surface layer of stalk, G, sclerites from interior of stalk, H, detail of sclerite in F; I, caterpillar-like sclerites from interior of stalk. Scales: 0.50 mm (A, C, F); 0.10 mm (E, G, I); 0.05 mm (B, D).

Fig. 6 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 6. Dendronephthya punicea (Studer, 1888), NMBE-303-1. A, B, Polyps showing anthocodial armature; C, detail of uppermost part of a supporting bundle spindle; D, tentacle sclerites; E, point spindles; F, detail of upper part of a point spindle; G, detail of middle part of a point spindle; H, intermediate spindle; I, crown spindle. Scales: 0.10 mm.

Fig. 2 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 2. Dendronephthya doederleini Külenthal, 1905, NMBE-295-1. A, B, Polyp showing anthocodial armature; C, detail of uppermost part of a supporting bundle spindle; D, tentacle sclerites; E, point spindles; F, detail of uppermost part of a point spindle; G, detail of middle part of a point spindle. Scales: 0.10 mm.

Fig. 8 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 8. Dendronephthya flabellifera (Studer, 1888), NMBE-299. A, B, Polyps showing anthocodial armature; C, tentacle sclerites; D, tentacle rachis sclerites; E, point spindles, F, detail of uppermost part of a supporting bundle spindle; G, detail of uppermost part of a point spindle; H, detail of lowest part of a point spindle. Scales: 0.10 mm.

Fig. 5 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 5. Dendronephthya sp., NMBE-295-2. A, B, Polyps showing anthocodial armature; C, tentacle sclerites; D, point spindles; E, F, details of upper parts of point spindles; G, detail of uppermost part of a supporting bundle spindle. Scales: 0.10 mm.

Fig. 14 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 14. Dendronephthya pumilio (Studer, 1888), NMBE-310. A, B, Polyp showing anthocodial armature; C, tentacle sclerites; D, point spindles; E, detail of upper part of a point spindle; F, detail of lower part of a point spindle; G, supporting bundle spindle; H, detail of upper part of a supporting bundle spindle; I, detail of lower part of a supporting bundle spindle. Scales: 0.10 mm.

Fig. 1 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 1. Diagram of anthocodial armature of Dendronephthya. Abbreviations: Cr, crown sclerites; M, intermediate sclerites; p, point sclerites; P, dominant uppermost sclerites; S.B., supporting bundle; SS, supplementary sclerites; t, tentacle sclerites.

Fig. 19 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 19. Dendronephthya rigida (Studer, 1888), NMBE-308. A, Spindles from surface layer of branches; B, detail of upper part of such a spindle; C, detail of lowermost part of such a spindle; D, flattened rods from interior of branches; E, flattened radiates from interior of branches. Scales: 1.0 mm (A); 0.10 mm (B–E).

Fig. 13 in Redescriptions of Five Species of Japanese Dendronephthya (Octocorallia: Alcyonacea) Based on Type Material Collected by Döderlein in 1879-81

Fig. 13. Polyps from colonies previously, and evidently mistakenly, assigned to Dendronephthya flabellifera. A, B, Tixier-Durivault and Prevorsek's (1962) supposed Dendronephthya flabellifera, (ZMUC) showing anthocodial armature; C, point spindle of A; D, E, Utinomi's (1954) supposed D. flabellifera, (SMBL-267), showing anthocodial armature; F, Utinomi's (1954) supposed D. flabellifera, (SMBL-266), showing anthocodial armature. Scales: 0.10 mm.