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622 results for “vitals”
Raw output data from ColabFold modelling for the paper 'Interaction of C21ORF2 with a domain of NEK1 mutated in human diseases is vital for NEK1 function in human cells'
<p><strong>Raw output data from ColabFold modelling for the paper 'Interaction of C21ORF2 with a domain of NEK1 mutated in human diseases is vital for NEK1 function in human cells'</strong></p> <p><strong>File descriptions:</strong></p> <p><strong>NEK11160endC21ORF2_amber_2e60f_relaxed_rank_1_model_1_fixed.pdb</strong><br> ColabFold output PDB file - Rank 1 model</p> <p><strong>NEK11160endC21ORF2_amber_2e60f_relaxed_rank_2_model_2_fixed.pdb</strong><br> ColabFold output PDB file - Rank 2 model</p> <p><strong>NEK11160endC21ORF2_amber_2e60f_relaxed_rank_3_model_4_fixed.pdb</strong><br> ColabFold output PDB file - Rank 3 model</p> <p><strong>NEK11160endC21ORF2_amber_2e60f_relaxed_rank_4_model_3_fixed.pdb</strong><br> ColabFold output PDB file - Rank 4 model</p> <p><strong>NEK11160endC21ORF2_amber_2e60f_relaxed_rank_5_model_5_fixed.pdb</strong><br> ColabFold output PDB file - Rank 5 model</p> <p><strong>NEK11160endC21ORF2_amber_2e60f_coverage.png</strong><br> ColabFold output chart - MSA sequence coverage</p> <p><strong>NEK11160endC21ORF2_amber_2e60f_PAE.png</strong><br> ColabFold output chart - PAE for each model</p> <p><strong>NEK11160endC21ORF2_amber_2e60f_plddt.png</strong><br> ColabFold output chart - predicted IDDT per position</p> <p><strong>Supplementary Excel file 1</strong><br> List of residues predicted to be involved in intermolecular interactions, and the type of interaction (based on PDB files for each models, generated using BIOVIA Discovery Studio 2021)</p>
Widespread variation in functional trait-vital rate relationships in tropical tree seedlings across a precipitation and soil phosphorus gradient
<p>A fundamental assumption of functional ecology is that functional traits are related to interspecific variation in performance. However, the relationship between functional traits and performance is often weak or uncertain, especially for plants. A potential explanation for this inconsistency is that the relationship between functional traits and vital rates (e.g., growth and mortality) is dependent on local environmental conditions, which would lead to variation in trait-rate relationships across environmental gradients. In this study, we examined trait-rate relationships for six functional traits (seed mass, wood density, maximum height, leaf mass per area, leaf area, and leaf dry matter content) using long-term data on seedling growth and survival of woody plant species from eight forest sites spanning a pronounced precipitation and soil phosphorus gradient in central Panama. For all traits considered except for leaf mass per area-mortality, leaf mass per area-growth, and leaf area-mortality relationships, we found widespread variation in the strength of trait-rate relationships across sites. For some traits, trait-rate relationships showed no overall trend but displayed wide site-to-site variation. In a small subset of cases, variation in trait-rate relationships was explained by soil phosphorus availability. Our results demonstrate that environmental gradients have the potential to influence how functional traits are related to growth and mortality rates, though much variation remains to be explained. Accounting for site-to-site variation may help resolve a fundamental issue in trait-based ecology – that traits are often weakly related to performance – and improve the utility of functional traits for explaining key ecological and evolutionary processes.</p>
Basilica di San Vitale (Ravenna, Italy)
"The Basilica of San Vitale is one of the most important monuments of Early Christian art in Italy, especially for the splendour of its mosaics. Founded by Julianus Argentarius and commissioned by Bishop Ecclesius, the octagonal church was consecrated by Archbishop Maximian in 548. The influence of oriental art, a typical feature of Ravenna buildings, plays a dominant role both for the architecture of the basilica, where elements of Eastern art merge with Western tradition and for its mosaic decoration, which expresses the ideology and religious beliefs of the Justinian era. The typical division into nave and two aisles is replaced here by a central, octagonal plan, topped by a cupola that rests on eight pilasters and arches. The cupola and the niches were frescoed in 1780 by Bolognese painters Barozzi and Gandolfi and Guarana from Veneto." (Citation: http://www.turismo.ra.it/eng/Discover-the-area/Art-and-culture/Unesco-world-heritage/Basilica-of-San-Vitale ) Photograped using a GoPro Hero4 in dim lighting Source: Objaverse 1.0 / Sketchfab
Data and code for "Large-scale remote sensing analysis reveals an increasing coupling of grassland vitality to atmospheric water demand"
<p>Data and code for <br>"Large-scale remote sensing analysis reveals an increasing coupling of grassland vitality to atmospheric water demand"</p> <p>All R code used for the analysis is provided in the folder <em>code</em>. <br>Data and intermediate results are provided or stored in the folders <em>data </em>and <em>tmp_data</em>.<br>All results including figures will be stored in the folder <em>results</em>. </p> <p>R version: 4.3.1</p> <p>To carry out the entire analysis the code should be run in the provided order:</p> <p>1) Code to run non-metric multidimensional scaling (NMDS) for habitat groups and <br>produce Fig. 1b (habitat map and legend for Fig 1a: data/eunis_gl_habitat_ger_990m.tif,eunis_gl_habitat_ger_990m_legend.clr)<br> <br>2) Code to generate grassland vitality maps and time series from 1985 to 2021 (Fig. 3). <br>Grassland vitality maps on 30m for all grasslands in Germany provided in data/glv_1985-2021.zip.</p> <p>3) Code to model relation of grassland vitality to five drought indices (VPD, temperature, CWB, soil moisture, precipitation),<br>output are Fig. 4, Fig. S1, Tab. 1.</p> <p>4) Code for trend analysis of drought sensitivity based on 5-, 10-, and 15-year moving windows, output are Fig. 5, Fig. S2. </p> <p>5) Code to model drought sensitivity of grassland habitat groups and habitat types, output are Fig. 6 and table with sensitivity per habitat type. </p>
Hawaiian gallinule vital rate data from O'ahu and Kaua'i: Reproduction and survival data from an endangered bird
<p>Where stable source populations of at-risk species exist, translocation may be a reasonable strategy for re-establishing extirpated populations. However, the success rates of such efforts are mixed, necessitating thorough preliminary investigation. Stochastic population modeling can be a useful method of assessing the potential success of translocations. Here, we report on the results of modeling translocation success for the Hawaiian Common Gallinule ('alae 'ula; <em>Gallinula galeata sandvicensis</em>), an endangered waterbird endemic to the Hawaiian Islands. Using updated vital rates, we constructed a model simulating three existing extant (wild) source populations and a hypothetical recipient site on another island. We then projected the effects of six different translocation scenarios and sensitivity of the results to variation of three important demographic parameters on the probability of extinction (PE) of the reintroduced and donor populations. Larger translocations, of at least 30 birds, had low probability of extinction in the reintroduced population, but raised extinction risk of the smallest source population. Spacing out translocations in time (e.g., 10 birds translocated in total in three installments over nine years), led to lower PE than translocating all individuals at once (i.e., bulk translocations) for both the source and reintroduced populations. Brood size and hatch-year juvenile survival had a disproportionate impact on reintroduced population viability. Importantly, the reported juvenile survival rate is very near the threshold for population failure. This suggests that post-introduction and subsequent management of wetlands, particularly predator control, could be critical to reintroduction success. We recommend that individuals should be translocated from multiple, genetically distinct subpopulations to reduce the possibility of inbreeding depression. Based on this analysis, the recipient wetland should be sufficiently large that it can support at least 25 pairs of gallinules. Based on recent estimates of population densities on O'ahu, such a wetland would need to be between 3.75-74.6 ha.</p> <p>Where stable source populations of at-risk species exist, translocation may be a reasonable strategy for re-establishing extirpated populations. However, the success rates of such efforts are mixed, necessitating thorough preliminary investigation. Stochastic population modeling can be a useful method of assessing the potential success of translocations. Here, we report on the results of modeling translocation success for the Hawaiian Common Gallinule ('alae 'ula; <em>Gallinula galeata sandvicensis</em>), an endangered waterbird endemic to the Hawaiian Islands. Using updated vital rates, we constructed a model simulating three existing extant (wild) source populations and a hypothetical recipient site on another island. We then projected the effects of six different translocation scenarios and sensitivity of the results to variation of three important demographic parameters on the probability of extinction (PE) of the reintroduced and donor populations. Larger translocations, of at least 30 birds, had low probability of extinction in the reintroduced population, but raised extinction risk of the smallest source population. Spacing out translocations in time (e.g., 10 birds translocated in total in three installments over nine years), led to lower PE than translocating all individuals at once (i.e., bulk translocations) for both the source and reintroduced populations. Brood size and hatch-year juvenile survival had a disproportionate impact on reintroduced population viability. Importantly, the reported juvenile survival rate is very near the threshold for population failure. This suggests that post-introduction and subsequent management of wetlands, particularly predator control, could be critical to reintroduction success. We recommend that individuals should be translocated from multiple, genetically distinct subpopulations to reduce the possibility of inbreeding depression. Based on this analysis, the recipient wetland should be sufficiently large that it can support at least 25 pairs of gallinules. Based on recent estimates of population densities on O'ahu, such a wetland would need to be between 3.75-74.6 ha.</p>
Crude vital rates and indirect estimates of life expectancy at birth for the Nordic countries, 18th and 19th centuries
<p>This file provides the necessary input data (crude vital rates) and shows the calculations for the indirect estimation of life expectancy at birth (e0) for males and females combined, using the method developed in McCann, J. 1976. 'A Technique for Estimating Life Expectancy with Crude Vital Rates', Demography, 13(2): pp. 259-272.</p> <p>Coverage: Sweden (1736-1750), Norway (1735-1845), Denmark (1800-1834), Iceland (1735-1837), and Finland (1751-1877).</p> <p>The annual estimates end in the year before estimates in the Human Mortality Database become available.</p> <p>For a detailed description see Torres, C. and Oeppen, J. 2019. The Health Transition in the Nordic Countries (Working paper, available upon request: ctorres@sdu.dk). </p>
Assessing the feasibility and acceptability of a pre-clinic vital signs assessment in primary care: a pilot study.
Open the record for dataset details and reuse information.
Data from: Integrating vital rates explains optimal worker size for resource return by bumble bee workers
1. Size-number trade-offs in reproduction are commonly observed in nature. Bumble bee (Bombus spp.) colonies produce workers that vary considerably in size. This variation suggests that colonies face potential size-number trade-offs when producing workers. 2. Here, we estimated size-based vital rates of Bombus vosnesenskii workers using colonies reared from wild caught queens. We conducted a mark-recapture study to estimate worker survival as a function of body size. We also collected data on pollen and nectar loads as well as foraging trips using a radio-frequency identification system to estimate daily resource return as a function of body size. We integrated survival and daily resource return to estimate lifetime resource collection and offset these estimates by the size-based worker production costs. 3. We found size-based trade-offs among workers of different sizes. Smaller workers had higher survival, but larger workers returned with more resources per day. The largest workers made slightly fewer foraging trips per day. 4. Overall, larger workers made the greatest lifetime contribution to both nectar and pollen collection. However, once the benefits of larger workers are offset by their higher production costs, intermediate-sized workers were the optimal for net resource contribution according to our models. Many previous studies have found that larger workers outperformed smaller workers with foraging and in-nest tasks, yet these studies have not integrated multiple fitness components or worker production costs to quantify net resource contribution towards colony growth. 5. Accounting for tradeoffs between costs and performance changed our conclusions about optimal body size from being large to being near the observed average. Similar approaches of integrating multiple vital rates may resolve apparently suboptimal life histories in other taxa.
Vital rate estimates for the common eider Somateria mollissima, a data-rich exemplar of the seaduck tribe
<p>This database contains estimates of the following vital rates (as required to parameterise matrix population models), for the common eider (<em>Somateria mollissima</em>): 1st year survival (measured either from hatching, or from fledging, to 1 year old); 2nd year survival; adult annual survival; first breeding (both age-specific recruitment probability, and breeding propensity across potential recruitment ages); breeding propensity of established female breeders; clutch size; hatching success; and fledging success. These estimates are drawn from 134 studies, across the scientific and grey literature – including three previously inaccessible datasets on clutch size that were contributed in response to a call for data through the IUCN Species Survival Commission's Duck Specialist Group (IDs 127, A and B). This is a relational database, linking estimates and associated metadata to the relevant study (or unique unpublished combination thereof) by a unique ID number in the 'MASTER' sheet. For further information, refer to the associated publication, and/or explanatory notes on the column headings of each sheet (.xlsx version only, but provided in the dataset README .txt file).</p>
Is green the new black? Black-backed Woodpecker vital rates do not differ between unburned and burned forests within a pyrodiverse landscape
<p>Woodpeckers can reflect rapid changes to forest health and often serve as indicator species to help guide forest management decisions. The Black-backed Woodpecker (<em>Picoides</em> <em>arcticus</em>) is known for its strong association with recently burned forests and is a species of conservation concern due to habitat loss stemming from post-fire management of burned forest. Recently, several studies have found the Black-backed Woodpecker occupying extensive areas of unburned (i.e., green) forests in the western part of its range during the breeding season, raising questions about whether green forests can support viable nesting populations in this region. We studied breeding Black-backed Woodpeckers in southern Oregon, USA to evaluate whether two vital rates critical to population recruitment – nest survival and post-fledging survival – differed between green and burned forests. During 2018, 2019, and 2021, we monitored 91 Black-backed Woodpecker nests (<em>n</em> = 34 in green forest, <em>n</em> = 57 in burned forest) and found that neither daily nest survival rate nor reproductive output (i.e., the number of fledglings per successful nest) differed between nests located in green and burned forest; however, nestling body condition was slightly enhanced in green forest. We also quantified survival of recently fledged individuals using VHF radio telemetry and found that the survival rate of birds in green forest was nearly identical to those in burned forest, with most mortalities occurring within 4 weeks of fledging. Taken together, our results indicate that Black-backed Woodpeckers in green forests were equally successful at breeding as conspecifics in recently burned forest, although nesting densities in the green forest we studied were lower than those in burned forest. Our findings indicate certain types of green forest, particularly mature lodgepole pine, can support viable populations of the Black-backed Woodpecker in the western portion of its range. This finding has conservation implications given that green forest occupies the majority of the forested landscape in this region and is often juxtaposed to areas subjected to high-severity fire. Therefore, practices that promote pyrodiversity – landscape-level spatial and temporal variability in fire effects – as well as connectivity between green and burned forest within fire-prone landscapes are likely to provide the greatest conservation benefit for this species. </p>
The Moderating Effect of Employee Agility on the Link between Employee Vitality, Digital Literacy and Transformational Leadership with Job Performance: An Empirical Study of HR Practitioners in the Manufacturing Sector of Northern Malaysia.
<p>This is a dataset for a study that examines the effects of employee vitality, digital literacy, and transformational leadership on job performance. Additionally, it investigates the moderating role of employee agility in these relationships. Data were collected from HR practitioners in manufacturing companies in the northern region of Malaysia for analysis. The results indicate that the job performance of HR practitioners is positively influenced by employee vitality, digital literacy and transformational leadership. </p>
VITAL-DEP: Depression Endpoint Prevention in the VITamin D and OmegA-3 TriaL
ClinicalTrials.gov study NCT01696435. IPD Sharing: Not stated. Countries: 1. Publications: 9.
Assessment of the Effect of PAP on Energy and Vitality in Mild OSA Patients: The Merge Study
ClinicalTrials.gov study NCT02699463. IPD Sharing: NO. Countries: 1. Publications: 1.
Age-related Macular Degeneration (AMD) in the Vitamin D and Omega-3 Trial (VITAL)
ClinicalTrials.gov study NCT01782352. IPD Sharing: Not stated. Countries: 1. Publications: 1.
Advance Care Planning: Communicating With Outpatients for Vital Informed Decision
ClinicalTrials.gov study NCT04660422. IPD Sharing: YES. Countries: 1. Publications: 2.
The Effect of Perioperative Heated Sock Application on Hypothermia and Vital Signs in Bladder Tumor Surgery
ClinicalTrials.gov study NCT06988696. IPD Sharing: YES. Countries: 1. Publications: 1.
Validation of a Vital Signs Monitoring Wristband
ClinicalTrials.gov study NCT05566886. IPD Sharing: NO. Countries: 1. Publications: 2.
VITamin D and OmegA-3 TriaL: Effects on Bone Structure and Architecture (VITAL)
ClinicalTrials.gov study NCT01747447. IPD Sharing: Not stated. Countries: 1. Publications: 6.
Standing Balance as the Fifth Vital Sign in Clinical Setting
ClinicalTrials.gov study NCT04139642. IPD Sharing: NO. Countries: 1. Publications: 1.
Effect of Nintedanib on Biomarkers of Extracellular Matrix Turnover in Patients With Idiopathic Pulmonary Fibrosis and Limited Forced Vital Capacity Impairment
ClinicalTrials.gov study NCT02788474. IPD Sharing: YES. Countries: 13. Publications: 4.
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