Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

522

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

522 results for “gene regulatory network”

Learn how ShareScore rates datasets ↗
geo20/100

CHD4 Interacts With TBX5 to Maintain the Gene Regulatory Network of Postnatal Atrial Cardiomyocytes [ChIP-seq]

GEO Series GSE284095. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenAug 2025View details →
geo20/100

Etv6-dependent positive and negative gene regulatory network controls vegfa expression in vivo [RNA-seq]

GEO Series GSE115220. Xenopus laevis. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2019View details →
geo20/100

Chromatin Accessibility-Based Characterization of the Gene Regulatory Networks Underpinning Phenotypic Plasticity in the Honey Bee (ChIP-Seq).

GEO Series GSE206992. Apis mellifera. 27 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenNov 2022View details →
geo20/100

Molecular fingerprint of the podocyte reveals novel gene regulatory networks

GEO Series GSE39441. Mus musculus. 10 samples. Type: Expression profiling by array.

openGEO-OpenNov 2012View details →
geo20/100

Coupled single-cell CRISPR screening and epigenomic profiling reveals causal gene regulatory networks

GEO Series GSE116297. Homo sapiens. 8711 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.

openGEO-OpenDec 2018View details →
geo20/100

Mapping gene regulatory networks in Drosophila eye development by large-scale transcriptome perturbations and motif inference [ChIP-Seq]

GEO Series GSE62557. Drosophila melanogaster. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenDec 2014View details →
geo20/100

Identification of Pax6-dependent gene regulatory networks in the mouse lens

GEO Series GSE13244. Mus musculus. 6 samples. Type: Expression profiling by array.

openGEO-OpenOct 2008View details →
geo20/100

The PLETHORA gene regulatory network guides growth and cell differentiation in Arabidopsis roots

GEO Series GSE79755. Arabidopsis thaliana. 36 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenDec 2016View details →
geo20/100

A gene regulatory network driven by LIM homeobox 1 (LHX1) for embryonic head development

GEO Series GSE117761. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing; Expression profiling by array.

openGEO-OpenDec 2018View details →
geo20/100

RUNX1-EVI1 disrupts lineage determination and the cell cycle by interfering with RUNX1 and EVI1 driven gene regulatory networks [DNaseI-seq]

GEO Series GSE143458. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenApr 2020View details →
geo20/100

Characterization of the regulatory networks mediating TLR9 dependent gene activation in vivo

GEO Series GSE11202. Mus musculus. 50 samples. Type: Expression profiling by array.

openGEO-OpenApr 2009View details →
geo20/100

GATA6 gene regulatory network drives multi drug resistance in cutaneous melanoma

GEO Series GSE164431. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2021View details →
geo20/100

FOG2 modulates a TBX5/GATA4-co-ocupied atrial gene regulatory network linking heart failure to atrial fibrillation risk [ChIP-Seq]

GEO Series GSE198733. Mus musculus. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenMay 2024View details →
geo20/100

Mapping the glucocorticoid gene regulatory network and alterations that contribute to steroid resistance in childhood acute lymphoblastic leukemia [ChIP-seq]

GEO Series GSE175482. Homo sapiens. 74 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo20/100

Systematic discovery and perturbation of regulatory genes in human T cells reveals the architecture of immune networks

GEO Series GSE171737. Homo sapiens. 337 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.

openGEO-OpenApr 2021View details →
geo20/100

Nonsense-mediated mRNA decay orchestrates neuronal migration and cortical lamination while modulating reelin and ciliary gene regulatory networks (snRNAseq)

GEO Series GSE295222. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo20/100

Reconstructing gene regulatory networks of tumorigenesis [genex]

GEO Series GSE72530. Homo sapiens. 6 samples. Type: Expression profiling by array.

openGEO-OpenMay 2016View details →
geo20/100

Transcriptional regulatory networks underlying gene expression changes in Huntington's disease

GEO Series GSE88775. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenFeb 2018View details →
geo20/100

Specificity of Pitx3-Dependent Gene Regulatory Networks in Subsets of Midbrain Dopamine Neurons

GEO Series GSE93275. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJan 2017View details →
geo20/100

An ancient gene regulatory network sets the position of the forebrain in chordates

GEO Series GSE239838. Branchiostoma lanceolatum. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2025View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record