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12,393 results for “materiality”
Supplementary material 2 from: Vieira PE, Queiroga H, Costa FO, Holdich DM (2016) Distribution and species identification in the crustacean isopod genus Dynamene Leach, 1814 along the North East Atlantic-Black Sea axis. ZooKeys 635: 1-29. https://doi.org/10.3897/zookeys.635.10240
List of locations where Dynamene specimens were recorded in this study : Explanation note: Complete list of locations and respective regions and co-ordinates where Dynamene specimens were recorded in this study, organized by species.
Supplementary material 2 from: Ortiz-Rodriguez AE, Escobar-Castellanos MA, Pérez-Farrera MA (2016) Phylogenetic analyses and morphological characteristics support the description of a second species of Tridimeris (Annonaceae). PhytoKeys 74: 79-96. https://doi.org/10.3897/phytokeys.74.10371
Figure S2. The 50% majority-rule consensus tree from the Bayesian analysis of matK coding region : Explanation note: Numbers on branches of the major clades indicate Bayesian posterior probabilities (PP), maximum likelihood (MLBS) and parsimony (MPBS) bootstrap values in that order.
Supplementary material 1 from: Percy DM (2017) Making the most of your host: the Metrosideros-feeding psyllids (Hemiptera, Psylloidea) of the Hawaiian Islands. ZooKeys 649: 1-163. https://doi.org/10.3897/zookeys.649.10213
Figure S1 : Explanation note: Illustration of adult characters and measurements referred to in the text. A fore wing length and width (dotted lines), veins R, M and Cu1, vein Rs length, cells cu1 and m2 width (w) and height (h) B head width (dotted line), vertex width (solid line), vertex length and genal process length C proboscis, distal segment length D hind leg femur length, tibia length, proximal and distal tarsus length E antennal length (dotted line), 3rd antennal segment length (solid line) F male terminalia, proctiger length, subgenital plate height, paramere length, distal aedeagus segment length and apical head length G egg length and width H–I female terminalia: H lateral view, proctiger length, subgenital plate length, anal ring length I dorsal view, proctiger length, anal ring length.
Supplementary material 1 from: Vieira PE, Queiroga H, Costa FO, Holdich DM (2016) Distribution and species identification in the crustacean isopod genus Dynamene Leach, 1814 along the North East Atlantic-Black Sea axis. ZooKeys 635: 1-29. https://doi.org/10.3897/zookeys.635.10240
Material examined in this study : Explanation note: Each entry shows the number of specimens observed for each life history stage, habitat, person who provided the specimen(s), location and country, co-ordinates and other information.
Supplementary material 3 from: Ortiz-Rodriguez AE, Escobar-Castellanos MA, Pérez-Farrera MA (2016) Phylogenetic analyses and morphological characteristics support the description of a second species of Tridimeris (Annonaceae). PhytoKeys 74: 79-96. https://doi.org/10.3897/phytokeys.74.10371
Figure S3. The 50% majority-rule consensus tree from the Bayesian analysis of ycf1 coding region : Explanation note: Numbers on branches of the major clades indicate Bayesian posterior probabilities (PP), maximum likelihood (MLBS) and parsimony (MPBS) bootstrap values in that order.
Supplementary material 1 from: Lambert SM, Hutter CR, Scherz MD (2017) Diamond in the rough: a new species of fossorial diamond frog (Rhombophryne) from Ranomafana National Park, southeastern Madagascar. Zoosystematics and Evolution 93(1): 143-155. https://doi.org/10.3897/zse.93.10188
File S1 : Explanation note: This file contains a PDF-embedded interactive 3D model of the skeleton of the holotype of Rhombophryne nilevina sp. n., KU 340897, generated via X-ray micro-Computed Tomography. The model can be opened in Adobe® Acrobat Pro or Reader, versions IX and above. To activate it, click the image.
Supplementary material 1 from: Talamas EJ, Pham H-T (2017) An online photographic catalog of Platygastroidea (Hymenoptera) in the Institute of Ecology and Biological Resources (Hanoi, Vietnam), with some taxonomic notes. In: Talamas EJ, Buffington ML (Eds) Advances in the Systematics of Platygastroidea. Journal of Hymenoptera Research 56: 225-239. https://doi.org/10.3897/jhr.56.10214
Platygastroidea in IEBR : Explanation note: A table lists the species of Platygastroidea, the author of the species, how many specimens are present in IEBR, including type status, and collecting unit identifiers for specimens that have been photographed.
Supplementary material 1 from: Miettinen O, Spirin V, Vlasák J, Rivoire B, Stenroos S, Hibbett D (2016) Polypores and genus concepts in Phanerochaetaceae (Polyporales, Basidiomycota). MycoKeys 17: 1-46. https://doi.org/10.3897/mycokeys.17.10153
S1 Table - INSDC accession numbers : Explanation note: INSDC accession numbers for DNA sequences used in this study. Specimens provided with collector and collection number information have been sequenced for this study, the rest retrieved from the INSDC database.
Supplementary material 3 from: Machado A, Rodríguez-Expósito E, López M, Hernández M (2017) Phylogenetic analysis of the genus Laparocerus, with comments on colonisation and diversification in Macaronesia (Coleoptera, Curculionidae, Entiminae). ZooKeys 651: 1-77. https://doi.org/10.3897/zookeys.651.10097
Chronogram of genus Laparocerus Schönherr, 1834 from Macaronesia (Coleoptera, Curculionidae, Entiminae) : Explanation note: Timetree generated with MEGA7 (Kumar et al. 2016) using the RelTime method. Divergence times for all branching points in the Bayesian phylogram (COII, 16S rRNA, 12S rRNA) calculated using Maximum Likelihood method with the General Time Reversible model. Relative times were optimized and converted to absolute divergence times (shown next to branching points) based on not allowing species cluster marked with ♦ to be older than the age of the island of La Palma (1,72 Ma) or younger than 0.21 Ma. Bars around each node represent 95% confidence intervals which were computed using the method described in Tamura et al. (2013). The estimated log likelihood value is -32807.3327. A discrete gamma distribution was used to model evolutionary rate differences among sites (6 categories (+G, parameter = 0.5622)). The rate variation model allowed for some sites to be evolutionarily invariable ([+I], 42.7318% sites). The analysis involved 255 nucleotide sequences. All positions containing gaps and missing data were eliminated. There were a total of 1357 positions in the final dataset. Taxon codes include an abbreviation of species name, its code number, and the initial of the island of origin (see Appendix 1).
Supplementary material 2 from: Machado A, Rodríguez-Expósito E, López M, Hernández M (2017) Phylogenetic analysis of the genus Laparocerus, with comments on colonisation and diversification in Macaronesia (Coleoptera, Curculionidae, Entiminae). ZooKeys 651: 1-77. https://doi.org/10.3897/zookeys.651.10097
4-gene phylogram of genus Laparocerus Schönherr, 1834 from Macaronesia (Coleoptera, Curculionidae, Entiminae) : Explanation note: Bayesian 50% majority rule consensus tree for COII, 16SrNA, 12S rRNA, and 28S rRNA: posterior probabilities above the branches. The analysis involved 245 nucleotide sequences. All positions containing gaps and missing data were eliminated except in the 12S rRNA sequence (gapcoded). There was a total of 2153 positions in the final dataset. Scale bar = genetic divergence.
Supplementary material 1 from: Machado A, Rodríguez-Expósito E, López M, Hernández M (2017) Phylogenetic analysis of the genus Laparocerus, with comments on colonisation and diversification in Macaronesia (Coleoptera, Curculionidae, Entiminae). ZooKeys 651: 1-77. https://doi.org/10.3897/zookeys.651.10097
Mitochondrial 3-gene phylogram of genus Laparocerus Schönherr, 1834 from Macaronesia (Coleoptera, Curculionidae, Entiminae) : Explanation note: Bayesian 50% majority rule consensus tree for COII, 16SrNA, and 12S rRNA: posterior probabilities above the branches. The analysis involved 256 nucleotide sequences. All positions containing gaps and missing data were eliminated except in the 12S rRNA sequence (gapcoded). There was a total of 1389 positions in the final dataset total OTUs = 256. Scale, genetic divergence.
Supplementary material 1 from: Talamas EJ, Buffington ML, Hoelmer K (2017) Revision of Palearctic Trissolcus Ashmead (Hymenoptera, Scelionidae). In: Talamas EJ, Buffington ML (Eds) Advances in the Systematics of Platygastroidea. Journal of Hymenoptera Research 56: 3-185. https://doi.org/10.3897/jhr.56.10158
URI table of HAO morphological terms : Explanation note: This table lists the morphological terms used in this publication and their associated concepts in the Hymenoptera Anatomy Ontology.
Supplementary material 1 from: Palasio RGS, Guimarães MCA, Ohlweiler FP, Tuan R (2017) Molecular and morphological identification of Biomphalaria species from the state of São Paulo, Brazil. ZooKeys 668: 11-32. https://doi.org/10.3897/zookeys.668.10562
Figure S1 : Explanation note: ML and NJ trees generated with MEGA 6 software from the alignment of the 104 Biomphalaria COI sequences.
Supplementary material 3 from: Senderov V, Georgiev T, Penev L (2016) Online direct import of specimen records into manuscripts and automatic creation of data papers from biological databases . Research Ideas and Outcomes 2: e10617. https://doi.org/10.3897/rio.2.e10617
This archive contains XSLT transformations from EML v. 2.1.1 and v. 2.1.0 to Pensoft data paper format.
Supplementary material 1 from: Baldwin CC, Robertson RD, Nonaka A, Tornabene L (2016) Two new deep-reef basslets (Teleostei, Grammatidae, Lipogramma), with comments on the eco-evolutionary relationships of the genus. ZooKeys 638: 45-82. https://doi.org/10.3897/zookeys.638.10455
Figure S1 : Explanation note: Neighbor-joining network based on COI sequences of Lipogramma species investigated in this study. Scale-bar units are substitutions per site.
Supplementary material 1 from: Read GB, ten Hove HA, Yanan Sun Y, Kupriyanova EK (2017) Hydroides Gunnerus, 1768 (Annelida, Serpulidae) is feminine: a nomenclatural checklist of updated names. ZooKeys 642: 1-52. https://doi.org/10.3897/zookeys.642.10443
Hydroides type-species data summary : Explanation note: Name categories, original-name WoRMS links, geolocations, locations, etc.
Supplementary material 2 from: Gómez JF, Nieves MH, Gayubo SF, Nieves-Aldrey JL (2017) Terminal-instar larval systematics and biology of west European species of Ormyridae associated with insect galls (Hymenoptera, Chalcidoidea). ZooKeys 644: 51-88. https://doi.org/10.3897/zookeys.644.10035
Character states of Ormyrus larvae included in the systematic study : Explanation note: Observed character states of characters listed in Appendix 1. Explanation of symbols: monomorphic states 0–3; not applicable (*); unknown (?). Characters are unordered.
Supplementary material 1 from: Gómez JF, Nieves MH, Gayubo SF, Nieves-Aldrey JL (2017) Terminal-instar larval systematics and biology of west European species of Ormyridae associated with insect galls (Hymenoptera, Chalcidoidea). ZooKeys 644: 51-88. https://doi.org/10.3897/zookeys.644.10035
Characters of Ormyrus larvae used for systematic study : Explanation note: Characters are listed by body region, for the body, head and under lip complex, which for the latter is subdivided between labrum, maxillae and mandibles.
Supplementary material 3 from: Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P, Coimbra V, Coleine C, Gustafsson C, He J, Hofmann T, Kristiansson E, Larsson E, Larsson T, Liu Y, Martinsson S, Meyer W, Panova M, Pombubpa N, Ritter C, Ryberg M, Svantesson S, Scharn R, Svensson O, Töpel M, Unterseher M, Visagie C, Wurzbacher C, Taylor AFS, Kõljalg U, Schriml L, Nilsson RH (2016) Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). MycoKeys 16: 1-15. https://doi.org/10.3897/mycokeys.16.10000
Krona chart : Explanation note: Interactive Krona chart for visualizing the taxonomic distribution of annotated BMS sequences down to order level. Sequences classified as Fungi sp. (36.4%) or non-fungal (0.9%) were excluded from this dataset.
Supplementary material 2 from: Tang C-T, Mikó I, Nicholls JA, Schwéger S, Yang M-M, Stone GN, Sinclair F, Bozsó M, Melika G, Pénzes Z (2016) New Dryocosmus Giraud species associated with Cyclobalanopsis and non-Quercus host plants from the Eastern Palaearctic (Hymenoptera, Cynipidae, Cynipini). Journal of Hymenoptera Research 53: 77-162. https://doi.org/10.3897/jhr.53.9890
Semantic statements of natural language phenotypes composed in Protégé 5.0 (http://protege.stanford.edu/) using the OWL Manchester syntax. : Explanation note: Semantic statements of natural language phenotypes composed in Protégé 5.0 (http://protege.stanford.edu/) using the OWL Manchester syntax.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.