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12,393 results for “materiality”
Supplementary material 2 from: van Nieukerken E, Doorenweerd C, Hoare R, Davis D (2016) Revised classification and catalogue of global Nepticulidae and Opostegidae (Lepidoptera, Nepticuloidea). ZooKeys 628: 65-246. https://doi.org/10.3897/zookeys.628.9799
BOLD TaxonID Tree of the dataset Lepidoptera - Nepticuloidea of the World 2016 [DS-NEPCAT] : Explanation note: A Neighbor joining tree of COI sequences, with Kimura 2 Parameter as distance model for sequences linger than 200 bp, 3203 records.
Supplementary material 1 from: van Nieukerken E, Doorenweerd C, Nishida K, Snyers C (2016) New taxa, including three new genera show uniqueness of Neotropical Nepticulidae (Lepidoptera). ZooKeys 628: 1-63. https://doi.org/10.3897/zookeys.628.9805
Specimen data for Neotropical Nepticulidae with BOLD data : Explanation note: The 87 records are all records of the new taxa described in this paper. Records are listed alphabetically by species, country, stateProvince, AdminDivision2, AdminDivision3, Locality.
Supplementary material 6 from: Kanda K, Gomez AR, Van Driesche R, Miller KB, Maddison DR (2016) Phylogenetic placement of the Pacific Northwest subterranean endemic diving beetle Stygoporus oregonensis Larson & LaBonte (Dytiscidae, Hydroporinae). ZooKeys 632: 75-91. https://doi.org/10.3897/zookeys.632.9866
Data availability : Explanation note: NEXUS formatted single-gene and concatenated nucleotide sequence alignments.
Supplementary material 1 from: Abarenkov K, Adams RI, Irinyi L, Agan A, Ambrosio E, Antonelli A, Bahram M, Bengtsson-Palme J, Bok G, Cangren P, Coimbra V, Coleine C, Gustafsson C, He J, Hofmann T, Kristiansson E, Larsson E, Larsson T, Liu Y, Martinsson S, Meyer W, Panova M, Pombubpa N, Ritter C, Ryberg M, Svantesson S, Scharn R, Svensson O, Töpel M, Unterseher M, Visagie C, Wurzbacher C, Taylor AFS, Kõljalg U, Schriml L, Nilsson RH (2016) Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). MycoKeys 16: 1-15. https://doi.org/10.3897/mycokeys.16.10000
Keywords used to identify fungal sequences from the built environment in the INSDC : Explanation note: Keywords used to identify fungal sequences from the built environment in the INSDC.
Supplementary material 1 from: Aubriot X, Loup C, Knapp S (2016) Confirming the identity of two enigmatic "spiny solanums" (Solanum subgenus Leptostemonum, Solanaceae) collected by Jean-Baptiste Leschenault in Java. PhytoKeys 70: 97-110. https://doi.org/10.3897/phytokeys.70.9758
List of collections used in the study with full locality and descriptive notes : Explanation note: Details of the herbarium material examined for this manuscript (including full locality and descriptive notes).
Supplementary material 2 from: Macías-Hernández N, López SC, Roca-Cusachs M, Oromí P, Arnedo MA (2016) A geographical distribution database of the genus Dysdera in the Canary Islands (Araneae, Dysderidae). ZooKeys 625: 11-23. https://doi.org/10.3897/zookeys.625.9847
Supplementary Figure 1 : Explanation note: Distributional map of each species of Dysdera (alphabetically ordered).
Supplementary material 1 from: van Nieukerken E, Doorenweerd C, Hoare R, Davis D (2016) Revised classification and catalogue of global Nepticulidae and Opostegidae (Lepidoptera, Nepticuloidea). ZooKeys 628: 65-246. https://doi.org/10.3897/zookeys.628.9799
Specimen data for Catalogue of Nepticuloidea with BOLD data : Explanation note: The 213 records comprise specimens that have either been cited briefly or completely in the Notes, or have been used more implicitly for the texts and figures. Records are listed alphabetically by species, country, stateProvince, AdminDivision2, AdminDivision3, Locality.
Supplementary material 1 from: El-Barougy RF, Cadotte MW, Khedr A-HA, Nada RM, Maclvor SJ (2017) Heterogeneity in patterns of survival of the invasive species Ipomoea carnea in urban habitats along the Egyptian Nile Delta. NeoBiota 33: 1-17. https://doi.org/10.3897/neobiota.33.9968
Table 1S. Comparison of stratified multivariable generalized linear models : Explanation note: Comparison of stratified multivariable generalized linear models that model the relationship between survival probability and different variables. The best model, selected by AIC, p-value of chi square, deviance explained (DE) and (AW). AW is the Akaikes weight which is the probability of the model being the best model explaining the relationship between survival probability and different variables. DE is the percentage of deviance explained (DE) as a measure of the model's goodness-of-fit.
Supplementary material 7 from: Wurzbacher C, Warthmann N, Bourne EC, Attermeyer K, Allgaier M, Powell JR, Detering H, Mbedi S, Grossart H-P, Monaghan MT (2016) High habitat-specificity in fungal communities in oligo-mesotrophic, temperate Lake Stechlin (North-East Germany). MycoKeys 16: 17-44. https://doi.org/10.3897/mycokeys.16.9646
Comprehensive Blast analysis : Explanation note: Blast results against the NCBI nt database (June 2015) for all eukaryotes presented in a Megan5 plot.
Supplementary material 6 from: Wurzbacher C, Warthmann N, Bourne EC, Attermeyer K, Allgaier M, Powell JR, Detering H, Mbedi S, Grossart H-P, Monaghan MT (2016) High habitat-specificity in fungal communities in oligo-mesotrophic, temperate Lake Stechlin (North-East Germany). MycoKeys 16: 17-44. https://doi.org/10.3897/mycokeys.16.9646
Alternative ordinations based on binary data and taxonomy : Explanation note: Two alternative NMDS accompanied by corresponding PERMANOVA statistics based on a) the presence/absence of OTUs (left panel) and the Jaccard index, and b) the taxonomic classification of SILVA NGS and the Cao index. The ellipses (coloured to POM type) are based on standard deviations around centroids with a confidence level of 0.95.
Supplementary material 5 from: Wurzbacher C, Warthmann N, Bourne EC, Attermeyer K, Allgaier M, Powell JR, Detering H, Mbedi S, Grossart H-P, Monaghan MT (2016) High habitat-specificity in fungal communities in oligo-mesotrophic, temperate Lake Stechlin (North-East Germany). MycoKeys 16: 17-44. https://doi.org/10.3897/mycokeys.16.9646
Rarefaction analysis : Explanation note: Rarefaction curves based on the OTU table without OTU singletons for all eukaryotes (left panel) and for fungal OTUs (right panel).
Supplementary material 8 from: Wurzbacher C, Warthmann N, Bourne EC, Attermeyer K, Allgaier M, Powell JR, Detering H, Mbedi S, Grossart H-P, Monaghan MT (2016) High habitat-specificity in fungal communities in oligo-mesotrophic, temperate Lake Stechlin (North-East Germany). MycoKeys 16: 17-44. https://doi.org/10.3897/mycokeys.16.9646
Phylogenetic tree of Neocallimastigales sequences : Explanation note: Phylogenetic bayesian tree based on 10 million generations. Sequences that were classified as Neocallimastigales in the manuscript are coloured in red with the frequency of sequences in the dataset in black. The name corresponds to the representative read identifier in the dataset (accessible at ENA nucleotide archive: PRJEB14236). Node labels are posterior probabilities above 0.8. Statistically supported branches have an probability of 0.95-1.
Supplementary material 4 from: Wurzbacher C, Warthmann N, Bourne EC, Attermeyer K, Allgaier M, Powell JR, Detering H, Mbedi S, Grossart H-P, Monaghan MT (2016) High habitat-specificity in fungal communities in oligo-mesotrophic, temperate Lake Stechlin (North-East Germany). MycoKeys 16: 17-44. https://doi.org/10.3897/mycokeys.16.9646
Krona charts of classified OTUs (RDP) and sequences (SILVA NGS). : Explanation note: File archive in "zip" format. Decompress with e.g., "unzip" for inspecting individual html files. Open html files with an internet browser (network connection must be enabled). Krona charts presenting the classified sequences based on a) OTUs classified by the RDP classifier, and b) based clipped reads processed by the SILVA NGS pipeline.
Supplementary material 3 from: Wurzbacher C, Warthmann N, Bourne EC, Attermeyer K, Allgaier M, Powell JR, Detering H, Mbedi S, Grossart H-P, Monaghan MT (2016) High habitat-specificity in fungal communities in oligo-mesotrophic, temperate Lake Stechlin (North-East Germany). MycoKeys 16: 17-44. https://doi.org/10.3897/mycokeys.16.9646
Detailed results of the clipping procedure : Explanation note: File archive in "zip" format. Decompress with e.g., "unzip" for inspecting individual files. Files describing the bioinformatic processing and the effects of the clipping procedure.
Supplementary material 1 from: Miralles A, Köhler J, Glaw F, Vences M (2016) Species delimitation methods put into taxonomic practice: two new Madascincus species formerly allocated to historical species names (Squamata, Scincidae). Zoosystematics and Evolution 92(2): 257-275. https://doi.org/10.3897/zse.92.9945
List of specimens examined morphologically : Explanation note: Specimens examined are listed including collection number, locality and collector information.
Supplementary material 1 from: Duan L, Yang X, Liu P, Johnson G, Wen J, Chang Z (2016) A molecular phylogeny of Caraganeae (Leguminosae, Papilionoideae) reveals insights into new generic and infrageneric delimitations. PhytoKeys 70: 111-137. https://doi.org/10.3897/phytokeys.70.9641
Voucher information and GenBank accession numbers : Explanation note: Data are arranged in the order: taxon name, locality, collector(s), collection number and herbarium, GenBank accession numbers for ITS, matK, trnL-trnF, psbA-trnH. Newly generated sequences are indicated by an asterisk (*); missing sequences are indicated by a dash (–).
Supplementary material 1 from: Wurzbacher C, Warthmann N, Bourne EC, Attermeyer K, Allgaier M, Powell JR, Detering H, Mbedi S, Grossart H-P, Monaghan MT (2016) High habitat-specificity in fungal communities in oligo-mesotrophic, temperate Lake Stechlin (North-East Germany). MycoKeys 16: 17-44. https://doi.org/10.3897/mycokeys.16.9646
Accompanying data tables : Explanation note: Two additional tables stating 1) the physicochemistry of the lake during the sampled time span, 2) the proportions of fungal-like organism and terrestrial fungi ("forest fungi", see main text).
Supplementary material 5 from: Kanda K, Gomez AR, Van Driesche R, Miller KB, Maddison DR (2016) Phylogenetic placement of the Pacific Northwest subterranean endemic diving beetle Stygoporus oregonensis Larson & LaBonte (Dytiscidae, Hydroporinae). ZooKeys 632: 75-91. https://doi.org/10.3897/zookeys.632.9866
Table 3 : Explanation note: Taxa from Miller et al. (2013) sampled in this study with updated tribal and subtribal classification of Miller and Bergsten (2014).
Supplementary material 2 from: Kanda K, Gomez AR, Van Driesche R, Miller KB, Maddison DR (2016) Phylogenetic placement of the Pacific Northwest subterranean endemic diving beetle Stygoporus oregonensis Larson & LaBonte (Dytiscidae, Hydroporinae). ZooKeys 632: 75-91. https://doi.org/10.3897/zookeys.632.9866
Figure 2 : Explanation note: Majority rule consensus of 1,000 bootstrap replicates performed on single gene datasets. Bootstrap percentage given for clades recovered with more than 50% support.
Supplementary material 1 from: Tang C-T, Mikó I, Nicholls JA, Schwéger S, Yang M-M, Stone GN, Sinclair F, Bozsó M, Melika G, Pénzes Z (2016) New Dryocosmus Giraud species associated with Cyclobalanopsis and non-Quercus host plants from the Eastern Palaearctic (Hymenoptera, Cynipidae, Cynipini). Journal of Hymenoptera Research 53: 77-162. https://doi.org/10.3897/jhr.53.9890
URI table (Seltmann et al. 2013) containing anatomical terms, definitions and uniform resource identifiers of Hymenoptera specific classes in the Hymenoptera Anatomy Ontology (http://hymao.org). : Explanation note: URI table (Seltmann et al. 2013) containing anatomical terms, definitions and uniform resource identifiers of Hymenoptera specific classes in the Hymenoptera Anatomy Ontology (http://hymao.org).
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.