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Figure 5 from: Turani M, Carmona L, Barry PJ, Close HL, Bullimore R, Cervera JL (2024) First occurrence of the genus Pleurobranchaea Leue, 1813 (Pleurobranchida, Nudipleura, Heterobranchia) in British waters, with the description of a new species. Zoosystematics and Evolution 100(1): 49-59. https://doi.org/10.3897/zse.100.113707
Figure 5 Phylogenetic hypothesis of Pleurobranchaea systematics, based on concatenated dataset (COI+16S+H3) inferred by Bayesian analysis. Significant support values are given as BI posterior probabilities (below branch) and ML bootstrap percentages (above branch). Rectangles are automatic barcode gap discovery for the COI and 16S dataset. White rectangles indicate the lack of those sequences in the alignment.
Figure 4 from: Turani M, Carmona L, Barry PJ, Close HL, Bullimore R, Cervera JL (2024) First occurrence of the genus Pleurobranchaea Leue, 1813 (Pleurobranchida, Nudipleura, Heterobranchia) in British waters, with the description of a new species. Zoosystematics and Evolution 100(1): 49-59. https://doi.org/10.3897/zse.100.113707
Figure 4 Pleurobranchaea britannica sp. nov. Reproductive system (NHMUK 20230088/5). Abbreviations: a – atrium; am – ampulla; bc – bursa copulatrix; dd – deferent duct; fg – female gland; hd – hermaphroditic duct; ov – oviduct; p – penis; pr – prostate; r – retractor muscle; ps – penis sac; sr – seminal receptacle; v – vagina.
Figure 1 from: Turani M, Carmona L, Barry PJ, Close HL, Bullimore R, Cervera JL (2024) First occurrence of the genus Pleurobranchaea Leue, 1813 (Pleurobranchida, Nudipleura, Heterobranchia) in British waters, with the description of a new species. Zoosystematics and Evolution 100(1): 49-59. https://doi.org/10.3897/zse.100.113707
Figure 1 Sampling stations where Pleurobranchaea britannica sp. nov. material was collected. A. The map on the left shows the south of England: the red dots refer to the 2018 campaign and the green dots to the 2019 campaign; B. The map on the right shows part of Spain and the orange dot is where samples were collected in 2019.
Figure 3 from: Turani M, Carmona L, Barry PJ, Close HL, Bullimore R, Cervera JL (2024) First occurrence of the genus Pleurobranchaea Leue, 1813 (Pleurobranchida, Nudipleura, Heterobranchia) in British waters, with the description of a new species. Zoosystematics and Evolution 100(1): 49-59. https://doi.org/10.3897/zse.100.113707
Figure 3 Pleurobranchaea britannica sp. nov. Scanning electron micrographs of radula and jaw. A. Complete radula (MNCN15.05/200180); B. Lateral teeth of radula (MNCN15.05/200180); C. View from above of the anterior part of the jaw (MNCN15.05/200180); D. Lateral view of the anterior part of the jaw (MNCN15.05/200180).
Figure 6 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 6 Morphological characteristics of Macrobrachium rostrolevatus sp. nov. (A, B, D–I ovigerous female holotype CUMZ MP00323 C ovigerous female specimen MUMNH MP00338.1) A lateral view B carapace C rostral variation D epistome E second pereiopod F teeth between fingers G third pereiopod H uropod and I movable spine at uropodal diaeresis. Scale bars: 1 mm.
Figure 5 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 5 Morphological characteristics of Macrobrachium panhai sp. nov. (A, F ovigerous female paratype MUMNH MP00303 B–E, G–H ovigerous female holotype CUMZ MP00302) A lateral view B carapace C epistome D second pereiopod E teeth between fingers F third pereiopod G uropod and H movable spine at uropodal diaeresis. Scale bars: 1 mm.
Figure 4 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 4 Morphological characteristics of Macrobrachium lanchesteri (A female topotype MUMNH MP00218 B–H female topotype MUMNH MP00216.1) A lateral view B carapace C epistome D second pereiopod E teeth between fingers F third pereiopod G uropod and H movable spine at uropodal diaeresis. Scale bars: 1 mm.
Figure 2 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 2 Phylogenetic tree based on a concatenation of COI and 16S genes. Nodes of a phylogenetic tree marked with a black circle indicate statistical support from both ML and BI (≥ 70 bootstrap values and ≥ 0.95 posterior probability scores). A white circle indicates statistical support for either ML or BI. An asterisk indicates the topotype in M. lanchesteri and holotype in the new species.
Figure 3 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 3 Living habit of specimens of three Macrobrachium species A, BM. lanchesteri from Bang Khiat, Singhanakhon, Songkhla, Thailand C, DM. rostrolevatus sp. nov. from Bueng Khong Long, Bueng Kan, Thailand EM. panhai sp. nov. from Sri Nakarin Dam, Tha Kradan, Si Sawat, Kanchanaburi, Thailand. Scale bars: 1 cm.
Figure 1 from: Chaowvieng A, Sutcharit C, Chanabun R, Srisonchai R, Jeratthitikul E, Siriwut W (2024) Molecular phylogeny and taxonomic position of Macrobrachium lanchesteri (De Man, 1911), with descriptions of two new species from Thailand (Decapoda, Caridea, Palaemonidae). ZooKeys 1190: 163-193. https://doi.org/10.3897/zookeys.1190.113898
Figure 1 Distribution map of three Macrobrachium species in Thailand. A colour symbol indicates the locality of specimen used in phylogenetic analyses. A transparent symbol indicates the locality of specimen examined based on morphology. Equivalent symbols, whether coloured or not, indicate the same species.
Supplementary material 1 from: Hsu S-Y, Xu Y-C, Lin Y-C, Chuang W-Y, Lin S-R, Stadler M, Tangthirasunun N, Cheewangkoon R, AL-Shwaiman HA, Elgorban AM, Ariyawansa HA (2024) Hidden diversity of Pestalotiopsis and Neopestalotiopsis (Amphisphaeriales, Sporocadaceae) species allied with the stromata of entomopathogenic fungi in Taiwan. MycoKeys 101: 275-312. https://doi.org/10.3897/mycokeys.101.113090
The morphological features of Pestalotiopsissensu lato fungi and GenBank accession numbers
Figure 8 from: Hsu S-Y, Xu Y-C, Lin Y-C, Chuang W-Y, Lin S-R, Stadler M, Tangthirasunun N, Cheewangkoon R, AL-Shwaiman HA, Elgorban AM, Ariyawansa HA (2024) Hidden diversity of Pestalotiopsis and Neopestalotiopsis (Amphisphaeriales, Sporocadaceae) species allied with the stromata of entomopathogenic fungi in Taiwan. MycoKeys 101: 275-312. https://doi.org/10.3897/mycokeys.101.113090
Figure 8 Neopestalotiopsis camelliae-oleiferae (NTUPPMCC 18-166 = CD08) A the original habitat of Neopestalotiopsis camelliae-oleiferae; the stroma of Tolypocladium sp. hyperparasitic on an ascocarps of Elaphomyces sp. (Ascomycota) B top view (left) and bottom view (right) of the colony on potato dextrose agar (PDA) after incubation for seven days C conidiomata on carnation leaf D, E conidiogenous cells and immature conidia F–I conidia. Scale bars: 250 μm (C); 20 μm (D–I).
Figure 7 from: Hsu S-Y, Xu Y-C, Lin Y-C, Chuang W-Y, Lin S-R, Stadler M, Tangthirasunun N, Cheewangkoon R, AL-Shwaiman HA, Elgorban AM, Ariyawansa HA (2024) Hidden diversity of Pestalotiopsis and Neopestalotiopsis (Amphisphaeriales, Sporocadaceae) species allied with the stromata of entomopathogenic fungi in Taiwan. MycoKeys 101: 275-312. https://doi.org/10.3897/mycokeys.101.113090
Figure 7 Split graphs showing the results of PHI tests for three gene regions (AITSBtub2Ctef1-α) of Pestalotiopsis manyueyuanani with their phylogenetically closely -related species using LogDet transformation and splits decomposition options. The new taxon in each graph is shown in red and taxa representing ex-type strains are in bold.
Figure 5 from: Hsu S-Y, Xu Y-C, Lin Y-C, Chuang W-Y, Lin S-R, Stadler M, Tangthirasunun N, Cheewangkoon R, AL-Shwaiman HA, Elgorban AM, Ariyawansa HA (2024) Hidden diversity of Pestalotiopsis and Neopestalotiopsis (Amphisphaeriales, Sporocadaceae) species allied with the stromata of entomopathogenic fungi in Taiwan. MycoKeys 101: 275-312. https://doi.org/10.3897/mycokeys.101.113090
Figure 5 Pestalotiopsis hispanica (NTUPPMCC 18-162 = CD03) A the original habitat of Pestalotiopsis hispanica; the stroma of Ophiocordyceps sp. B top view (left) and bottom view (right) of the colony on potato dextrose agar (PDA) after incubation for seven days C conidiomata on carnation leaf D, E conidiogenous cells and immature conidia F–I conidia. Scale bars: 250 μm (C); 10 μm (D–I).
Figure 4 from: Hsu S-Y, Xu Y-C, Lin Y-C, Chuang W-Y, Lin S-R, Stadler M, Tangthirasunun N, Cheewangkoon R, AL-Shwaiman HA, Elgorban AM, Ariyawansa HA (2024) Hidden diversity of Pestalotiopsis and Neopestalotiopsis (Amphisphaeriales, Sporocadaceae) species allied with the stromata of entomopathogenic fungi in Taiwan. MycoKeys 101: 275-312. https://doi.org/10.3897/mycokeys.101.113090
Figure 4 Pestalotiopsis chamaeropis (NTUPPMCC 21-054 = CD09) A the original habitat of Pestalotiopsis chamaeropis; the stroma of Ophiocordyceps sp. B top view (left) and bottom view (right) of the colony on potato dextrose agar (PDA) after incubation for seven days C conidiomata on carnation leaf D, E conidiogenous cells and immature conidia F–I conidia. Scale bars: 250 μm (C); 20 μm (D–I).
Figure 10 from: Hsu S-Y, Xu Y-C, Lin Y-C, Chuang W-Y, Lin S-R, Stadler M, Tangthirasunun N, Cheewangkoon R, AL-Shwaiman HA, Elgorban AM, Ariyawansa HA (2024) Hidden diversity of Pestalotiopsis and Neopestalotiopsis (Amphisphaeriales, Sporocadaceae) species allied with the stromata of entomopathogenic fungi in Taiwan. MycoKeys 101: 275-312. https://doi.org/10.3897/mycokeys.101.113090
Figure 10 Conidial morphology of Pestalotiopsis formosana (A, B NTUPPMCC 21-056), Pestalotiopsis trachycarpicola (C NTUPPMCC 18-160 D NTUPPMCC 21-055) and Neopestalotiopsis sp. (E NTUPPMCC 18-161), isolated from entomopathogenic fungi in this study. Scale bars: 20 μm (A–E).
Figure 3 from: Hsu S-Y, Xu Y-C, Lin Y-C, Chuang W-Y, Lin S-R, Stadler M, Tangthirasunun N, Cheewangkoon R, AL-Shwaiman HA, Elgorban AM, Ariyawansa HA (2024) Hidden diversity of Pestalotiopsis and Neopestalotiopsis (Amphisphaeriales, Sporocadaceae) species allied with the stromata of entomopathogenic fungi in Taiwan. MycoKeys 101: 275-312. https://doi.org/10.3897/mycokeys.101.113090
Figure 3 ML Phylogenetic tree of genus Neopestalotiopsis attained from the concatenated DNA sequence data of ITS, tub2 and tef1-α loci implemented via IQ-TREE. ML bootstrap values (MLB) ≥ 70%, Maximum Parsimony bootstrap (MPB) values ≥ 70% and Bayesian Posterior Probabilities (PP) ≥ 0.95 are given at the nodes. The scale-bar shows the number of estimated substitutions per site. Pseudopestalotiopsis theae (MFLUCC 12-0055) was used as an outgroup. The new isolates are in red and taxa representing ex-type cultures are in bold.
Figure 12 from: Hsu S-Y, Xu Y-C, Lin Y-C, Chuang W-Y, Lin S-R, Stadler M, Tangthirasunun N, Cheewangkoon R, AL-Shwaiman HA, Elgorban AM, Ariyawansa HA (2024) Hidden diversity of Pestalotiopsis and Neopestalotiopsis (Amphisphaeriales, Sporocadaceae) species allied with the stromata of entomopathogenic fungi in Taiwan. MycoKeys 101: 275-312. https://doi.org/10.3897/mycokeys.101.113090
Figure 12 Comparison of the mycelium growth rates of eight pestalotiopsis-like fungal strains at 25 °C. According to Tukey's range test, data (mean ± standard deviation) with the same letters are not significantly different. Colours represent different taxa: NTUPPMCC 18-160, Pestalotiopsis trachycarpicola; NTUPPMCC 18-161, Neopestalotiopsis sp.; NTUPPMCC 18-162, Pestalotiopsis hispanica; NTUPPMCC 18-163, Neopestalotiopsis haikouensis; NTUPPMCC 18-165, Pestalotiopsis manyueyuanani.; NTUPPMCC 18-166, Neopestalotiopsis camelliae-oleiferae; NTUPPMCC 21-054, Pestalotiopsis chamaeropis; NTUPPMCC 21-056, Pestalotiopsis formosana.
Figure 13 from: Hsu S-Y, Xu Y-C, Lin Y-C, Chuang W-Y, Lin S-R, Stadler M, Tangthirasunun N, Cheewangkoon R, AL-Shwaiman HA, Elgorban AM, Ariyawansa HA (2024) Hidden diversity of Pestalotiopsis and Neopestalotiopsis (Amphisphaeriales, Sporocadaceae) species allied with the stromata of entomopathogenic fungi in Taiwan. MycoKeys 101: 275-312. https://doi.org/10.3897/mycokeys.101.113090
Figure 13 Optimal pH for mycelial growth of each species according to the comparison of colonial growth (mm) of different species at each pH, based on the mean values presented in Table S12. Colours represent different taxa: NTUPPMCC 18-160, Pestalotiopsis trachycarpicola; NTUPPMCC 18-161, Neopestalotiopsis sp.; NTUPPMCC 18-162, Pestalotiopsis hispanica; NTUPPMCC 18-163, Neopestalotiopsis haikouensis; NTUPPMCC 18-165, Pestalotiopsis manyueyuanani.; NTUPPMCC 18-166, Neopestalotiopsis camelliae-oleiferae; NTUPPMCC 21-054, Pestalotiopsis chamaeropis; NTUPPMCC 21-056, Pestalotiopsis formosana.
Figure 2 from: Hsu S-Y, Xu Y-C, Lin Y-C, Chuang W-Y, Lin S-R, Stadler M, Tangthirasunun N, Cheewangkoon R, AL-Shwaiman HA, Elgorban AM, Ariyawansa HA (2024) Hidden diversity of Pestalotiopsis and Neopestalotiopsis (Amphisphaeriales, Sporocadaceae) species allied with the stromata of entomopathogenic fungi in Taiwan. MycoKeys 101: 275-312. https://doi.org/10.3897/mycokeys.101.113090
Figure 2 ML phylogenetic tree of Pestalotiopsis obtained from the concatenated DNA sequence data of ITS, tub2 and tef1-α genes implemented in IQ-TREE. ML bootstrap values (MLB) ≥ 70%, Maximum Parsimony bootstrap (MPB) values ≥ 70% and Bayesian Posterior Probabilities (PP) ≥ 0.95 are given at the nodes. The scale-bar shows the number of estimated substitutions per site. Neopestalotiopsis protearum (CBS 114178) was used as an outgroup. The new isolates are in red and taxa representing ex-type cultures are in bold.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.