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4,753
datasets available to search
ShareScore release 0.9.0
Dataset results
4,753 results for “SHAPE”
Single-Cell Exon Deletion Profiling Reveals Splicing Events That Shape Gene Expression and Cell State Dynamics [ChIP-Seq]
GEO Series GSE292984. Homo sapiens. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
TRPS1 shapes YAP/TEAD-dependent transcription in breast cancer cells [4C-seq]
GEO Series GSE107022. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Transcription shapes 3D chromatin organization by interacting with loop-extruding cohesin complexes
GEO Series GSE196621. Mus musculus; Homo sapiens. 46 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
The spectrum and regulatory landscapes of intestinal innate lymphoid cells are shaped by the microbiome (ChIP-Seq)
GEO Series GSE85156. Mus musculus. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Type II topoisomerases shape multi-scale 3D chromatin folding in regions of positive supercoils (GapRUN).
GEO Series GSE255730. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
An alternative transcriptome shapes cell fate transitions in yeast (mRNA-seq)
GEO Series GSE137706. Saccharomyces cerevisiae. 81 samples. Type: Expression profiling by high throughput sequencing.
BRCA mutational status shapes the stromal microenvironment of pancreatic cancer linking CLU+ CAF expression with HSF1 signaling
GEO Series GSE200617. Mus musculus. 21 samples. Type: Expression profiling by high throughput sequencing.
[SHAPE-MaP_4_mM] U1 snRNP regulates recruitment of early spliceosomal components by disrupting SRSF1-pre-mRNA interactions
GEO Series GSE188649. Human adenovirus 2. 11 samples. Type: Other.
RNA polymerase II and PARP1 shape enhancer-promoter contacts [CUT&Tag]
GEO Series GSE206022. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
TLR2-induced CD8+ T cell deactivation shapes dendritic cell differentiation in the bone marrow during sepsis
GEO Series GSE210981. Mus musculus. 8 samples. Type: Expression profiling by array.
PUF partner interactions at a conserved interface shape the RNA binding landscape and cell fate
GEO Series GSE233561. Caenorhabditis elegans. 16 samples. Type: Expression profiling by high throughput sequencing; Other.
Satb1 integrates DNA sequence, shape, motif density and torsional stress to selectively bind a subset of putative targets in nucleosome-dense regions of the genome
GEO Series GSE123292. Mus musculus; Homo sapiens. 20 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Methionine metabolism shapes T helper cell responses through regulation of epigenetic reprogramming [ChIP-Seq]
GEO Series GSE143321. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Hox gene activity directs physical forces to differentially shape chick small and large intestinal epithelia
GEO Series GSE258895. Gallus gallus. 5 samples. Type: Expression profiling by high throughput sequencing.
TRPS1 shapes YAP/TEAD-dependent transcription in breast cancer cells
GEO Series GSE107023. Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single neonatal perturbations long-lastingly shape the transcriptome and TCR repertoire of the first wave of regulatory T cells
GEO Series GSE205466. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing; Other.
Tcf1-CTCF cooperativity shapes genomic architecture to promote CD8+ T cell homeostasis
GEO Series GSE179775. Mus musculus. 49 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
H4K20me3 methyltransferase SUV420H2 shapes the chromatin landscape of pluripotent embryonic stem cells
GEO Series GSE130723. Mus musculus. 6 samples. Type: Other.
H3K36me2 recruits DNMT3A and shapes intergenic DNA methylation landscapes
GEO Series GSE118785. Drosophila melanogaster; Homo sapiens; Mus musculus. 43 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Diverse Non-Genetic Allele Specific Expression Effects Shape Genetic Architecture at the Cellular Level in the Mammalian Brain [Primate Parents]
GEO Series GSE93785. Macaca fascicularis. 15 samples. Type: Methylation profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.