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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,411
datasets available to search
ShareScore release 0.9.0
Dataset results
1,411 results for “Cell States”
HER2 expression identifies dynamic functional states within circulating breast cancer cells
GEO Series GSE75367. Homo sapiens. 74 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome Regulation by PARP13 in Basal and Antiviral States in Human Cells (eCLIP)
GEO Series GSE215250. Homo sapiens. 8 samples. Type: Other.
BMP gradient along the intestinal villus axis controls zonated enterocyte and goblet cell states
GEO Series GSE194004. Mus musculus; Homo sapiens. 28 samples. Type: Expression profiling by high throughput sequencing.
Integrative single-cell analysis of transcriptional and epigenetic states in the human adult brain [scTHS-seq]
GEO Series GSE97887. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Clonal cell states link gastroesophageal junction tissues, metaplasia, and cancer [scRNA-seq]
GEO Series GSE291080. Homo sapiens. 45 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Transcriptome Mapping of Human Thymopoiesis Reveals a Continuum of Cell States During T-Lineage Specification and Commitment
GEO Series GSE139042. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Aged 2]
GEO Series GSE219057. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
A single-cell view on alga-virus interactions reveals sequential transcriptional programs and infection states
GEO Series GSE135429. Coccolithovirus; Emiliania huxleyi. 8 samples. Type: Expression profiling by high throughput sequencing.
Host and rabies virus gene expression is shaped by human brain cell type and reveals a preexisting pro-viral transcriptional state in astrocytes
GEO Series GSE284262. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Cell type-specific chromatin states differentially prime squamous cell carcinoma tumor-initiating cells for epithelial to mesenchymal transition [RNA-seq]
GEO Series GSE88989. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Dual states of Bmi1-expressing intestinal stem cells drive epithelial development and tissue regeneration
GEO Series GSE212798. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis of bidirectional reprogramming between early embryonic states reveals mechanisms of differential lineage plasticities [RNA-Seq]
GEO Series GSE266451. Mus musculus. 21 samples. Type: Expression profiling by high throughput sequencing.
snRNA-seq of human cutaneous neurofibromas before and after selumetinib treatment implicates role of altered Schwann cell states, inter-cellular signaling, and extracellular matrix in treatment respon
GEO Series GSE263046. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Acute myeloid leukemia cells resist chemotherapy through a transient senescence-like state [PDX]
GEO Series GSE146592. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Hippo Pathway Deletion in Adult Resting Cardiac Fibroblasts Initiates a Cell State Transition with Spontaneous and Self-Sustaining Fibrosis
GEO Series GSE135296. Mus musculus. 42 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.
Regenerative reprogramming of the intestinal stem cell state via Hippo signaling suppresses metastatic colorectal cancer [DSS_scRNAseq]
GEO Series GSE152369. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic profiling of Schlemm’s canal cells reveals a lymphatic-biased identity and three major cell states
GEO Series GSE272434. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Asymmetric division in a two-cell-like state rejuvenates embryonic stem cells
GEO Series GSE287152. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Enhancer grammar of liver cell types and hepatocyte zonation states [multiome]
GEO Series GSE218468. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Bulk transcriptomic analysis of normal, premalignant state and tumor mouse models of VAV1-MYOF gene fusion in Peripheral T-Cell Lymphoma
GEO Series GSE166671. Mus musculus. 31 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.