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Fig. 3 in A small parasitoid of fire ants, Pseudacteon obtusitus (Diptera: Phoridae): native range ecology and laboratory rearing
Fig. 3. Frequency distribution of Solenopsis invicta head size from which Pseudacteon obtusitus emerged, sorted by gender and sample yr. Insert: frequency distribution of Pseudacteon obtusitus thoraces sorted by gender and sample yr.
Fig. 1 in A small parasitoid of fire ants, Pseudacteon obtusitus (Diptera: Phoridae): native range ecology and laboratory rearing
Fig. 1. Monthly phenology of Pseudacteon obtusitus across mo and yr at Corrientes Province, Argentina.
Fig. 2 in A small parasitoid of fire ants, Pseudacteon obtusitus (Diptera: Phoridae): native range ecology and laboratory rearing
Fig. 2. Relative percent abundance of Pseudacteon obtusitus categorized by the time of d (morning until 12:00 P.M., 12:00 to 3:00 P.M., afer 3:00 P.M.) and sample mo (Apr, May, Jun, Sep, Oct, Nov, Jan).
Fig. 5 in A cyst-forming coccidian with large geographical range infecting forest and commensal rodents: Sarcocystis muricoelognathis sp. nov.
Fig. 5 Phylogenetic reconstruction of the 18S rRNA gene tree of the novel Sarcocystis species and other tissue cyst-forming coccidia based on 1465 homologous positions of 40 aligned nucleotide sequences under the minimum evolution (ME) criterion; selected eimeriid coccidia served as outgroup. The new sequences of Sarcocystis sp. from China are highlighted by black symbols. Branch support values are shown for 1000 bootstrap replicates of three independent alignments with a site coverage of 95%. The shaded box highlights the taxa included in the so-called S. zuoi complex
Fig. 6 in A cyst-forming coccidian with large geographical range infecting forest and commensal rodents: Sarcocystis muricoelognathis sp. nov.
Fig. 6 ML analysis of the ITS1 region of Sarcocystis sp., S. zuoi and other species of the Sarcocystidae; members of the Toxoplasmatinae served as outgroup. Bootstrap branch support values are shown in triplicate, indicating results from three independent alignments and analyses.The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. The analysis involved 204 homologous positions of 33 nucleotide sequences
Fig. 1 a–f in A cyst-forming coccidian with large geographical range infecting forest and commensal rodents: Sarcocystis muricoelognathis sp. nov.
Fig. 1 a–f Light microscopic and ultrastructural morphology of sarcocysts of Sarcocystis sp. in SD rats 5 months after inoculation with sporocysts isolated from rat snakes in Thailand. a Typical sporocyst from a fecal sample of Coelognathus radiatus; sporocysts from C. flavolineatus were identical in size and appearance; asterisk indicates single sporozoite. b Live sarcocyst, freed from muscle tissue; note the broad, palisade-like villar protrusions that could at times resemble those of Sarcocystis singaporensis with which this species can co-occur; however, the protrusions lack the basal stalks typical for the former species; the arrow highlights the septated compartments in the interior of the sarcocyst, and the inset shows a micrograph of live cystozoites freshly released from a cyst (arrowheads). c Typical structure of a cyst wall protrusion (isolate from C. flavolineatus); the arrows point to the electron-dense, knob-like structures of the primary cyst wall, whereby the knobs could apparently fuse to form an electron-dense borderline in larger protrusions (inset: arrowhead); also note the electron-light, thin layer of ground substance (GS) underneath the protrusions. d Typical cystozoites of the new species, which contained only two rhoptries (arrowheads) among relatively few micronemes (asterisks); additionally, the cystozoites exhibited vesicle-like structures in the anterior third of the cell containing electron-light, reticulate matter (arrow); the inset shows such a vesicle-like compartment at higher magnification, which was apparently not bound by a membrane (white arrow) and often located near micronemes (white asterisk); dense granules were present but rarely observed. e Interior and cyst wall of a mature sarcocyst (isolate from C. radiatus); metrocytes (asterisks) exclusively divided by endodyogeny, producing only two cystozoites (CZ). f Full-length section through a 15-µm-long protrusion of the sarcocyst wall; note that larger protrusions often occurred close to the tips of a cyst and showed a base with folds. AP, apicoplast; MI, mitochondrion; NU, nucleus; PT, villar protrusions
Fig. 4 in A cyst-forming coccidian with large geographical range infecting forest and commensal rodents: Sarcocystis muricoelognathis sp. nov.
Fig. 4 Two separate phylogenies of the 28S rRNA gene (longer and shorter sequence fragments) of the new Sarcocystis sp. sampled in China, newly sequenced S. zuoi from China and novel Sarcocystis isolates from Borneo. Symbols indicate the new sequences of this study, whereby taxa considered conspecific are grouped by shape. GenBank accession numbers are given behind each taxon name. a Maximum likelihood (ML) analysis of an alignment of 29 sequences and 1383 homologous positions. Branch support by bootstrapping (1000 replicate trees) is shown next to the branches, whereby the results of three independent analyses based on independent alignments are shown. The scale bar indicates the number of substitutions per site. All positions with <85% site coverage were eliminated, i.e. fewer than 15% alignment gaps, missing data and ambiguous bases were allowed at any position (partial deletion option). Selected eimeriid coccidia served as outgroup. b ML analysis of a trimmed alignment including five shorter sequences of Sarcocystis sampled in Borneo compared with the samples of Sarcocystis sp. from China; a total of 16 sequences and 366 homologous positions with site coverage of 95% were compared. Sarcocystis pantherophisi served as outgroup. The corresponding natural intermediate hosts are also indicated
Fig. 2 in A cyst-forming coccidian with large geographical range infecting forest and commensal rodents: Sarcocystis muricoelognathis sp. nov.
Fig. 2 Light microscopic and ultrastructural morphology of sarcocysts from Maxomys whiteheadi in Borneo (a–c) and wild Rattus norvegicus in China (d, e). Note, due to ethanol fixation some ultrastructural details of the samples from Borneo are poorly resolved. a Richardsen's dye-stained 1.0-µm thin section through a mature sarcocyst showing the villar protrusions (PT) of the cyst wall and numerous relatively small cystozoites (CZ). b Same sample as before under the electron microscope; note the thin layer of ground substance underneath the protrusions. c Enlarged part of the interior of the sarcocyst showing cystozoites—although with limited resolution—that possess a pair of rhoptries each, which is characteristic for this Sarcocystis species (black and white arrows; compare with Fig. 1d). d Live sarcocyst isolated from striated muscle tissue of a wild Norway rat in China; the inset shows live cystozoites that were freshly released from a cyst. e Ultrastructure of the same sarcocyst as before; note that the villar protrusions are highly similar to the samples from Borneo and Thailand regarding size and shape (Fig. 1e); again, cystozoites only exhibit one pair of rhoptries (arrows) and relatively few micronemes
Fig. 3 in A cyst-forming coccidian with large geographical range infecting forest and commensal rodents: Sarcocystis muricoelognathis sp. nov.
Fig. 3 Graph showing the size of sporocysts (length plotted against diameter, in μm; error bars indicate s.e.) of the Sarcocystis isolates from the colubrid snakes Coelognathus flavolineatus and C. radiatus in Thailand and closely related Sarcocystis. Every isolate/ species is indicated by a different symbol (legend), whereby sporocyst samples with the same shape index (= length/diameter) share the same background shading: white = 1.3; dark = 1.5; Sarcocystis pantherophisi = 1.2. Here, S. pantherophisi is included as reference for the snake host Sarcocystis lineage S2, while all other species belong to lineage S1 (except for S. murinotechis, for which no genetic information is available)
Figure 4 in Range extensions for Yellow-crowned Elaenia Myiopagis flavivertex and Dugand's Antwren Herpsilochmus dugandi in eastern Colombia
Figure 4. Female Dugand's Antwren Herpsilochmus dugandi, near Caño Negro, Buena Vista II, municipality of San José del Guaviare, dpto. Guaviare, Colombia, July 2016 (Wilmer A. Ramírez)
Figure 3 in Range extensions for Yellow-crowned Elaenia Myiopagis flavivertex and Dugand's Antwren Herpsilochmus dugandi in eastern Colombia
Figure 3. New records of Dugand's Antwren Herpsilochmus dugandi in Colombia, in dpto. Guaviare (red spots), and the species' range in surrounding countries per BirdLife International (2017; green). Records: 1: Los Cambulos, 2–6: Buena Vista II, 7: Playa Güio.
Figure 1 in Range extensions for Yellow-crowned Elaenia Myiopagis flavivertex and Dugand's Antwren Herpsilochmus dugandi in eastern Colombia
Figure 1. New records of Yellow-crowned Elaenia Myiopagis flavivertex in Colombia, in dptos. Guaviare and Meta (red spots), and the species' range in surrounding countries per BirdLife International (2017; green). Blue spot = only previous known locality in Colombia, in municipality of Inírida, dpto. Guainía. Records: 1–3 and 6: Puerto Concordia (Meta); 4–5: Buena Vista II; 7: El Retorno, 8: Damas de Nare, 9: Playa Güio.
Figure 2 in Range extensions for Yellow-crowned Elaenia Myiopagis flavivertex and Dugand's Antwren Herpsilochmus dugandi in eastern Colombia
Figure 2. Yellow-crowned Elaenia Myiopagis flavivertex, Playa Alta, municipality of Puerto Concordia, dpto. Meta, Colombia, January 2017 (Wilmer A. Ramírez)
Figure 1 in Why may the same species have different elevational ranges at different sites in New Guinea?
Figure 1. Example of the Massenerhebung effect: variation in the elevational ceiling and floor of the Island Leaf Warbler Seicercus poliocephalus on New Guinea mountains. Note that the warbler's ceiling (upper graph) and floor (lower graph) are higher on Central Range peaks than on outlier peaks; that they tend to be higher on higher peaks (summit elevation, abscissa); that they tend to be higher on inland-facing or interior-facing outlier transects than on coast-facing outlier transects; and that they tend to be higher on outlier transects further from the coast than on outlier transects nearer the coast. Data from Table 4.
Figure 2 in Why may the same species have different elevational ranges at different sites in New Guinea?
Figure 2. Google Earth view of the environment of Diamond's 1979 Foja coastal transect. Visible are the narrow north-flowing stream on which Diamond's camp was sited; the western and eastern ridges flanking the valley in which the stream lies; at the bottom of the field of view, the ridges south of Diamond's camp, rising towards the Foja summits; the near-vertical east / west barrier ridge constituting the northern flank of the basin, and pierced by the stream; and, at the top, New Guinea's lowland coastal plain beyond the east / west ridge, and in which the stream flows in a braided gravel bed. A line traces the crest of the western, eastern and northern ridges, with numbers denoting elevation readings in metres. Diamond's camp in the basin, labelled 610 m, was at 02°45'S, 138°63'E.
Figure 3 in Why may the same species have different elevational ranges at different sites in New Guinea?
Figure 3. Google Earth close-up view, from the south, of the east / west ridge closing to the north the basin viewed in Fig. 2. The ridge has near-vertical southern and northern faces, and is pierced by the basin's stream via a cleft only c.20 m wide.
Figure 3. A in Reintroduction of a Native Hawaiian Bee, Hylaeus anthracinus (F. Smith) (Hymenoptera: Colletidae), to Part of its Former Range
Figure 3. A newly released Hylaeus being attacked by Pheidole megacephala almost immediately after being released at site 3.
Figure 1 in Reintroduction of a Native Hawaiian Bee, Hylaeus anthracinus (F. Smith) (Hymenoptera: Colletidae), to Part of its Former Range
Figure 1. Map of the source sites in South Kohala and North Kona, and release sites at PUHO (inset).
Phylogeography and paleoclimatic range dynamics explain variable outcomes to contact across a species' range
<p>Files required to run analyses related to the journal article:" Phylogeography and paleoclimatic range dynamics explain variable outcomes to contact across a species’ range."<br><br>Code which utilizes these data are found at: https://github.com/k-lamb/Campanula-range-history</p> <p>DOI code link: https://doi.org/10.5281/zenodo.12097775</p>
Figure 5 in The range dynamics of a cactophilic Drosophila species under climate change scenarios
Figure 5. Last Interglacial, Last Glacial Maximum, Present (1960–1990), and the Future (2050 and 2070) predictions of the potential distribution of two cacti species (C. hildmannianus and P. machrisii) based on 10% thresholding approaches. The abbreviations are defined as follows: LGM-Last Glacial Maximum, LIG-Last Interglacial.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.