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5,738 results for “Standards”

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zenodo36/100

Standardizing linguistic data: method and tools for annotating(pre-orthographic) French

<p>With the development of big corpora of various periods, it becomescrucial to standardise linguistic annotation (e.g.lemmas, POS tags,morphological annotation) to increase the interoperability of the dataproduced, despite diachronic variations. In the present paper, wedescribe both methodologically (by proposing annotation principles)and technically (by creating the required training data and therelevant models) the production of a linguistic tagger for (early)modern French (16-18th c.), taking as much as possible into accountalready existing standards for contemporary and, especially, medievalFrench</p>

opencc-by-4.0Oct 2020View details →
dryad36/100

Quantifying selection on standard metabolic rate and body mass in Drosophila melanogaster

<p>Standard metabolic rate (SMR), defined as the minimal energy expenditure required for self-maintenance, is a key physiological trait. Few studies have estimated its relationship with fitness, most notably in insects. This is presumably due to the difficulty of measuring SMR in a large number of very small individuals. Using high-throughput flow-through respirometry and a <i>Drosophila melanogaster</i> laboratory population adapted to a life-cycle that facilitates fitness measures, we quantified SMR, body mass, and fitness in 515 female and 522 male adults. We used a novel multivariate approach to estimate linear and non-linear selection differentials and gradients from the variance-covariance matrix of fitness, SMR, and body mass, allowing traits specific covariates to be accommodated within a single model. In males, linear selection differentials for mass and SMR were positive and individually significant. Selection gradients were also positive but, despite substantial sample sizes, were non-significant due to increased uncertainty given strong SMR-mass collinearity. In females, only nonlinear selection was detected and it appeared to act primarily on body size, although the individual gradients were again non-significant. Selection did not differ significantly between sexes although differences in the fitness surfaces suggest sex-specific selection as an important topic for further study.</p>

opencc-zeroOct 2020View details →
zenodo36/100

Standard Bouguer anomaly model achieved by multi-source Bouguer gravity anomaly Bayesian data fusion algorithm in Sichuan-Yunnan region

<p>* Method: Based on the equivalent source inversion and Bayesian uncertainty quantization theory, a new multi-source gravity data fusion algorithm is developed, which effectively solves the multi-source data fusion problem with different noise and datum.</p> <p>* Standard Bouguer anomaly is Fused from WGM2012 Bouguer gravity anomaly model and 394 gravity profile data measured in Sichuan-Yunnan region. Fusion anomaly results can eliminate datum draft between multi-source gravity and reduce incoherent noise.</p> <p>* Spatial resolution of the standard Bouguer anomaly is about 20 kilometers.</p> <p>* Correcting deviations means the difference between the fused standard Bouguer anomaly model and the WGM2012 Earth gravity model.</p>

opencc-by-4.0Dec 2020View details →
dryad36/100

Multigenerational exposure to elevated temperatures leads to a reduction in standard metabolic rate in the wild

<ol> <li>In light of global climate change, there is a pressing need to understand and predict the capacity of populations to respond to rising temperatures. Metabolic rate is a key trait that is likely to influence the ability to cope with climate change. Yet, empirical and theoretical work on metabolic rate responses to temperature changes has so far produced mixed results and conflicting predictions.</li> <li>Our study addresses this issue using a novel approach of comparing fish populations in geothermally warmed lakes and adjacent ambient-temperature lakes in Iceland. This unique 'natural experiment' provides repeated and independent examples of populations experiencing contrasting thermal environments for many generations over a small geographic scale, thereby avoiding the confounding factors associated with latitudinal or elevational comparisons. Using Icelandic sticklebacks from three warm and three cold habitats, we measured individual metabolic rates across a range of acclimation temperatures to obtain reaction norms for each population.</li> <li>We found a general pattern for a lower standard metabolic rate in sticklebacks from warm habitats when measured at a common temperature, as predicted by Krogh's rule. Metabolic rate differences between warm- and cold-habitat sticklebacks were more pronounced at more extreme acclimation temperatures, suggesting the release of cryptic genetic variation upon exposure to novel conditions, which can reveal hidden evolutionary potential. We also found a stronger divergence in metabolic rate between thermal habitats in allopatry than sympatry, indicating that gene flow may constrain physiological adaptation when dispersal between warm and cold habitats is possible.</li> <li>In sum, our study suggests that fish may diverge toward a lower standard metabolic rate in a warming world, but this might depend on connectivity and gene flow between different thermal habitats.</li> </ol>

opencc-zeroJan 2020View details →
zenodo36/100

oaflux standardized

<p>test uploading a file</p>

opencc-zeroJan 2015View details →
zenodo36/100

CrowdTruth/Crowdsourcing-NamedEntities-GoldStandard: Data release for crowdsourcing named entity gold standards

<p>This repository contains the experimental results of identifying and typing named entities in English Wikipedia sentences by using a hybrid Multi-NER - crowd-enhanced approach.</p>

openother-openJan 2017View details →
zenodo36/100

Supplemental Movie for "The basis of sharp spike onset in standard biophysical models"

<p>Simulation of extracellular field during action potential.</p>

opencc-by-4.0Feb 2017View details →
zenodo36/100

Example run of the Biognosys iRT standard for liquid chromatography - mass spectrometry

<p>Depending on the composition of QC samples the LC performance can be monitored using peptides that elute over the entire gradient, and the dynamic range can be monitored if peptides are present in varying concentrations. Depicted here is the Biognosys iRT standard which consists of eleven peptides with varying chromatographic retention.</p>

opencc-by-4.0Jun 2017View details →
zenodo36/100

Annexes to the EFSA external scientific report on the standard regulatory action for retrospective cumulative risk assessment of pesticides in MCRA

<p>Annexes to the EFSA external scientific report on the standard regulatory action for retrospective cumulative risk assessment of pesticides in MCRA.</p> <p>Harmonized methodology for retrospective dietary cumulative risk assessment (CRA) of pesticides was established by the European Commission (EC) and the European Food Safety Authority (EFSA) in 2018, in close collaboration with the Dutch National Institute for Public Health and the Environment (RIVM). An update of this regulatory methodology (RM) was proposed and adopted by EFSA in 2022 in a CRA on craniofacial alterations. This updated RM was implemented in version 10 of the MCRA software and validated as part of the first action defined in the third framework partnership agreements between EFSA and RIVM. This report describes the implementation of this updated methodology in the MCRA software for risk assessment. This is done from a proposed framework of standard regulatory actions (SRAs). SRAs offer a user-friendly and simple to use option for regulators to perform retrospective and prospective CRAs in MCRA according to agreed-upon RMs. In particular, this report provides guidance on the use of an SRA for a retrospective dietary CRA for craniofacial alterations according to the updated RM in MCRA version 10.</p> <p>Detailed results of the comparison between&nbsp;reported by MCRA and EFSA&rsquo;s SAS&reg; software and MCRA formatted input files for the catalogues and secondary data are presented in the following annexes:</p> <ul> <li>Annex A &ndash; Comparison of the MOET at different percentiles reported by MCRA and EFSA&rsquo;s SAS&reg; software for retrospective dietary CRA of craniofacial alterations.&nbsp;</li> <li> <p>Annex B &ndash; Comparison of risk-driver contributions reported by MCRA and EFSA&rsquo;s SAS&reg; software for retrospective dietary CRA of craniofacial alterations.&nbsp;</p> </li> </ul> <ul> <li> <p>Annex C &ndash; MCRA formatted input data file containing the primary entity catalogues for the SRA on retrospective dietary CRA of craniofacial alterations.&nbsp;</p> </li> <li> <p>Annex D &ndash; MCRA formatted input data file containing the secondary data for the SRA on retrospective dietary CRA of craniofacial alterations.&nbsp;</p> </li> <li> <p>Annex E &ndash; MCRA formatted input data file containing the unit- variability factors for the Tier II calculations of the SRA on retrospective dietary CRA of craniofacial alterations.&nbsp;</p> </li> <li> <p>Annex F &ndash; MCRA formatted input data file containing the unit- variability factors for the Tier I calculations of the SRA on retrospective dietary CRA of craniofacial alterations.&nbsp;</p> </li> </ul> <p>&nbsp;</p>

opencc-by-4.0Dec 2022View details →
zenodo36/100

PheKnowLator Human Disease KG Benchmarks: Instance-Standard Relations-OWL (v3.0.2 - November 2021)

<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds&nbsp;(v3.0.2)</strong></p><p><strong>Build Type:&nbsp;</strong><i>Instance-Standard&nbsp;Relations-OWL</i></p><p><strong>Build Date: </strong>November&nbsp;01, 2021</p><p>&nbsp;</p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p>&nbsp;</p><p>🚨&nbsp;<strong>AVAILABLE FILES&nbsp;</strong>🚨&nbsp;</p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page&nbsp;👉&nbsp;<a href="https://github.com/callahantiff/PheKnowLator/wiki/November-01%2C-2021">here</a>.</li></ul>

opencc-by-4.0Oct 2021View details →
zenodo36/100

PheKnowLator Human Disease KG Benchmarks: Instance-Standard Relations-OWLNETS (v3.0.2 - November 2021)

<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds&nbsp;(v3.0.2)</strong></p><p><strong>Build Type:&nbsp;</strong><i>Instance-Standard&nbsp;Relations-OWLNETS</i></p><p><strong>Build Date: </strong>November&nbsp;01, 2021</p><p>&nbsp;</p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p>&nbsp;</p><p>🚨&nbsp;<strong>AVAILABLE FILES&nbsp;</strong>🚨&nbsp;</p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page&nbsp;👉&nbsp;<a href="https://github.com/callahantiff/PheKnowLator/wiki/November-01%2C-2021">here</a>.</li></ul>

opencc-by-4.0Oct 2021View details →
zenodo36/100

PheKnowLator Human Disease KG Benchmarks: Class-Standard Relations-OWL (v3.0.2 - November 2021)

<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds&nbsp;(v3.0.2)</strong></p><p><strong>Build Type:&nbsp;</strong><i>Class-Standard Relations-OWL</i></p><p><strong>Build Date: </strong>November&nbsp;01, 2021</p><p>&nbsp;</p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p>&nbsp;</p><p>🚨&nbsp;<strong>AVAILABLE FILES&nbsp;</strong>🚨&nbsp;</p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page&nbsp;👉&nbsp;<a href="https://github.com/callahantiff/PheKnowLator/wiki/November-01%2C-2021">here</a>.</li></ul>

opencc-by-4.0Oct 2021View details →
zenodo36/100

PheKnowLator Human Disease KG Benchmarks: Class-Standard Relations-OWLNETS (v3.0.2 - November 2021)

<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds&nbsp;(v3.0.2)</strong></p><p><strong>Build Type:&nbsp;</strong><i>Class-Standard Relations-OWLNETS</i></p><p><strong>Build Date: </strong>November&nbsp;01, 2021</p><p>&nbsp;</p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p>&nbsp;</p><p>🚨&nbsp;<strong>AVAILABLE FILES&nbsp;</strong>🚨&nbsp;</p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page&nbsp;👉&nbsp;<a href="https://github.com/callahantiff/PheKnowLator/wiki/November-01%2C-2021">here</a>.</li></ul>

opencc-by-4.0Oct 2021View details →
zenodo36/100

PheKnowLator Human Disease KG Benchmarks: Instance-Standard Relations-OWL (v3.0.2 - October 2021)

<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds&nbsp;(v3.0.2)</strong></p><p><strong>Build Type:&nbsp;</strong><i>Instance-Standard&nbsp;Relations-OWL</i></p><p><strong>Build Date: </strong>October&nbsp;18, 2021</p><p>&nbsp;</p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p>&nbsp;</p><p>🚨&nbsp;<strong>AVAILABLE FILES&nbsp;</strong>🚨&nbsp;</p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page&nbsp;👉&nbsp;<a href="https://github.com/callahantiff/PheKnowLator/wiki/October-18%2C-2021">here</a>.</li></ul>

opencc-by-4.0Oct 2021View details →
zenodo36/100

PheKnowLator Human Disease KG Benchmarks: Instance-Standard Relations-OWLNETS (v3.0.2 - October 2021)

<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds&nbsp;(v3.0.2)</strong></p><p><strong>Build Type:&nbsp;</strong><i>Instance-Standard&nbsp;Relations-OWLNETS</i></p><p><strong>Build Date: </strong>October&nbsp;18, 2021</p><p>&nbsp;</p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p>&nbsp;</p><p>🚨&nbsp;<strong>AVAILABLE FILES&nbsp;</strong>🚨&nbsp;</p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page&nbsp;👉&nbsp;<a href="https://github.com/callahantiff/PheKnowLator/wiki/October-18%2C-2021">here</a>.</li></ul>

opencc-by-4.0Oct 2021View details →
zenodo36/100

PheKnowLator Human Disease KG Benchmarks: Instance-Standard Relations-OWL (v2.1.0 - September 2021)

<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds&nbsp;(v2.1.0)</strong></p><p><strong>Build Type:&nbsp;</strong><i>Instance-Standard Relations-OWL</i></p><p><strong>Build Date: </strong>September 01, 2021</p><p>&nbsp;</p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p>&nbsp;</p><p>🚨&nbsp;<strong>AVAILABLE FILES&nbsp;</strong>🚨&nbsp;</p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page&nbsp;👉&nbsp;<a href="https://github.com/callahantiff/PheKnowLator/wiki/September-01%2C-2021">here</a>.</li></ul>

opencc-by-4.0Aug 2021View details →
zenodo36/100

PheKnowLator Human Disease KG Benchmarks: Class-Standard Relations-OWLNETS (v3.0.2 - October 2021)

<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds&nbsp;(v3.0.2)</strong></p><p><strong>Build Type:&nbsp;</strong><i>Class-Standard Relations-OWLNETS</i></p><p><strong>Build Date: </strong>October&nbsp;18, 2021</p><p>&nbsp;</p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p>&nbsp;</p><p>🚨&nbsp;<strong>AVAILABLE FILES&nbsp;</strong>🚨&nbsp;</p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page&nbsp;👉&nbsp;<a href="https://github.com/callahantiff/PheKnowLator/wiki/October-18%2C-2021">here</a>.</li></ul>

opencc-by-4.0Oct 2021View details →
zenodo36/100

PheKnowLator Human Disease KG Benchmarks: Class-Standard Relations-OWL (v3.0.2 - October 2021)

<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds&nbsp;(v3.0.2)</strong></p><p><strong>Build Type:&nbsp;</strong><i>Class-Standard Relations-OWL</i></p><p><strong>Build Date: </strong>October&nbsp;18, 2021</p><p>&nbsp;</p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p>&nbsp;</p><p>🚨&nbsp;<strong>AVAILABLE FILES&nbsp;</strong>🚨&nbsp;</p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page&nbsp;👉&nbsp;<a href="https://github.com/callahantiff/PheKnowLator/wiki/October-18%2C-2021">here</a>.</li></ul>

opencc-by-4.0Oct 2021View details →
zenodo36/100

PheKnowLator Human Disease KG Benchmarks: Class-Standard Relations-OWLNETS (v2.1.0 - August 2021)

<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds&nbsp;(v2.1.0)</strong></p><p><strong>Build Type:&nbsp;</strong><i>Class-Standard Relations-OWLNETS</i></p><p><strong>Build Date: </strong>August 01, 2021</p><p>&nbsp;</p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p>&nbsp;</p><p>🚨&nbsp;<strong>AVAILABLE FILES&nbsp;</strong>🚨&nbsp;</p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page&nbsp;👉&nbsp;<a href="https://github.com/callahantiff/PheKnowLator/wiki/August-01%2C-2021">here</a>.</li></ul>

opencc-by-4.0Jul 2021View details →
zenodo36/100

PheKnowLator Human Disease KG Benchmarks: Class-Standard Relations-OWL (v2.1.0 - August 2021)

<p><strong>PKT Human Disease Knowledge Graph Benchmark Builds&nbsp;(v2.1.0)</strong></p><p><strong>Build Type:&nbsp;</strong><i>Class-Standard Relations-OWL</i></p><p><strong>Build Date: </strong>August 01, 2021</p><p>&nbsp;</p><h3><strong>Important Build Information</strong></h3><p>The benchmarks were originally built and stored using Google Cloud Platform (GCP) resources. For details and a complete description of this process, can be found on GitHub (<a href="https://github.com/callahantiff/PheKnowLator/tree/master/builds#readme">here</a>). Note that we have developed an archive for the builds on Zenodo. While the original GCP resources contained all associated files, due to the file size upload limits associated with each archive, we have limited the uploaded files to the KGs, associated metadata, and log files. The list of resources, including their URLs, and date of download, can all be found in the associated logs.</p><p>Details on each of the files generated by the build process can be found in the file associated with this directory (<a href="https://zenodo.org/records/10065431/files/PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx?download=1">PheKnowLator_HumanDiseaseKG_Output_FileInformation.xlsx</a>).</p><p>&nbsp;</p><p>🚨&nbsp;<strong>AVAILABLE FILES&nbsp;</strong>🚨&nbsp;</p><ul><li>Available KG benchmark files are zipped and listed below.</li><li>For additional details on what each file contains, please see the associated Wiki page&nbsp;👉&nbsp;<a href="https://github.com/callahantiff/PheKnowLator/wiki/August-01%2C-2021">here</a>.</li></ul>

opencc-by-4.0Jul 2021View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.